EMLSAT00000000167, EMLSAT00000000167-696014 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000167
Unique NameEMLSAT00000000167-696014
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1025supercontigLSalAtl2s1025:127569..128639 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000167 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000167EMLSAG00000000167-682933Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000819EMLSAE00000000819-709747Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772841auto772841Lepeophtheirus salmonispolypeptide
EMLSAP00000000167EMLSAP00000000167Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000167

>EMLSAP00000000167 ID=EMLSAP00000000167|Name=EMLSAP00000000167|organism=Lepeophtheirus salmonis|type=polypeptide|length=356bp
MSDRSESPPRKKVRRSEEENPLKDKEDLFSKICDDIVLRICSHLDMMSLL
NLCETCQRLSRICGDKSLWIHPDSGPYSPSLLHLRKIVGRFLNWKTSSLR
IKGLLKNKSQSLSRALLELMSSRAPNLRSLTLDHHLIDANKIKITDFPDG
FSKLAELRLRDSSVINALDKESYFKEMHLKFPALKVLDLACSTWVPNHSL
LAICKLENLEELSLNGCYRIGECFVYTALATRFGFRNLRIIDLRGTFVGN
PEMQCFGRLPQITKAYFGNIITSRPSLSEGDGKIEDRGIASLIDVESPSS
LTHLSLQKTGLTDKMLQILAKKLPLVFLDVRDTNVTNEGIENFLTIKPQC
KLLHST
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mRNA from alignment at LSalAtl2s1025:127569..128639-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000167-696014 ID=EMLSAT00000000167-696014|Name=EMLSAT00000000167|organism=Lepeophtheirus salmonis|type=mRNA|length=1071bp|location=Sequence derived from alignment at LSalAtl2s1025:127569..128639- (Lepeophtheirus salmonis)
ATGTCGGACCGATCCGAGAGTCCTCCCCGAAAGAAGGTGCGTCGTAGTGA
GGAAGAGAATCCTCTGAAGGATAAGGAGGATCTCTTTTCCAAGATTTGCG
ATGACATCGTTCTCCGCATTTGCTCTCATTTGGATATGATGAGTCTCCTG
AACCTTTGTGAAACGTGTCAAAGACTCTCTCGCATCTGTGGAGACAAATC
CCTGTGGATCCATCCAGACTCTGGGCCTTACAGTCCCTCCCTCCTTCATC
TTCGTAAGATCGTTGGTCGTTTTCTAAACTGGAAGACTTCAAGTCTGCGA
ATCAAAGGACTACTCAAGAATAAAAGTCAGAGCCTGAGTCGAGCACTCCT
GGAACTCATGAGTTCCAGGGCGCCGAATCTTCGGTCTCTTACTCTAGATC
ATCACCTCATAGACGCGAATAAAATCAAAATCACGGATTTCCCTGATGGG
TTCTCAAAATTAGCAGAGCTACGACTTCGAGACTCTTCCGTCATCAATGC
CCTGGATAAGGAGTCTTATTTTAAGGAAATGCACCTCAAATTCCCTGCTC
TAAAAGTGTTAGACCTTGCATGCTCCACTTGGGTCCCGAATCATTCCCTC
CTTGCCATTTGCAAGCTTGAAAATTTGGAAGAGCTCTCTCTTAACGGTTG
TTACAGAATAGGAGAGTGCTTTGTGTACACTGCCTTGGCTACGAGGTTCG
GATTTCGGAATCTACGTATCATAGACCTACGAGGTACTTTTGTAGGGAAT
CCAGAGATGCAATGCTTTGGAAGACTGCCACAAATAACTAAAGCCTACTT
TGGAAATATAATTACGTCTCGTCCCAGTTTATCAGAAGGAGATGGTAAAA
TTGAGGATCGGGGCATTGCTTCCCTCATAGATGTGGAGTCTCCTTCTTCT
TTGACGCATTTATCCCTCCAAAAAACAGGACTCACTGACAAAATGCTACA
GATCCTTGCTAAAAAATTGCCCCTCGTCTTTTTGGACGTGAGGGACACAA
ATGTCACTAATGAGGGAATTGAAAATTTTCTAACGATCAAACCTCAGTGT
AAATTGTTACATAGTACTTGA
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