EMLSAT00000000169, EMLSAT00000000169-696016 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000169
Unique NameEMLSAT00000000169-696016
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1025supercontigLSalAtl2s1025:132951..136025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000169 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000169EMLSAG00000000169-682935Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000823EMLSAE00000000823-709751Lepeophtheirus salmonisexon
EMLSAE00000000824EMLSAE00000000824-709752Lepeophtheirus salmonisexon
EMLSAE00000000825EMLSAE00000000825-709753Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772972auto772972Lepeophtheirus salmonispolypeptide
EMLSAP00000000169EMLSAP00000000169Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000169

>EMLSAP00000000169 ID=EMLSAP00000000169|Name=EMLSAP00000000169|organism=Lepeophtheirus salmonis|type=polypeptide|length=620bp
MRVWRMFCRNKKLLGILTLSASLTLLGLFLYNTPSHAIENHKPGVGRDYY
PNVPDSKSQSKNKQHEYIDKDGIRVIVGKYVGDSLSPRTPSLSWEDLNAN
NYNPIRGMGENGEAVFALNSREEALAKRLWHINKFNLLASDKISLDRKLP
DVRKESCKSVVYTYSRLPSASIIIVFHNEAFSTLLRTVHSVLNRTPKLLL
SEILLVDDASNKTFLRRPLEDHMGALKINYKILRLKERSGLIQARLEGAK
VATGKVLIFLDAHCEVTTGWVEPLLXRIAEDPSHVVCPVIDIINDDNFGY
IKSFTLHWGAFNWELHFRWFTMSQSLIDDLKTNPTAPYRTPVMAGGLFAI
DRQYFYDIGSYDKAMDIWGGENLEMSFRIWMCSGSVEISPCSHVGHVFRK
ASPYSFPREGGVGKVLNTNLARVARVWMDDYKKFYFKINPTAESFDVDVS
ERSSLRKKLGCKSFKWFLENIWPQHFFPTQNRFFGEIIHFSTNKCIKKPH
SSPALSQNNGPALMDSCTSKFSVTELMVFSEDGHIMTDESVCLDSLNAED
EIEASVRFQSCNESNRQLWKYXQSNKTIMHLKSKKCLSHPREGTTDTLIV
SPCNGNSLQKWTLVKENPFG
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mRNA from alignment at LSalAtl2s1025:132951..136025+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000169-696016 ID=EMLSAT00000000169-696016|Name=EMLSAT00000000169|organism=Lepeophtheirus salmonis|type=mRNA|length=3075bp|location=Sequence derived from alignment at LSalAtl2s1025:132951..136025+ (Lepeophtheirus salmonis)
GGAAGGGATACAGCCCTCCAGCCATGTGGACGCCTCTAAGAAAGCACCCT
TTATCTCAGACTTTTTATGGTTATTTCCTGGTTTAAAAGAATAAAATGCA
AAATAAATAATATCCGGCGATCCAAATTACCAACTTTTGTCATTACGGTA
CTGTCTAATATACATAAAATGAAGTTCCTCTCAATAGCTATTACTATAAT
GCTATAAATGAATAAGTAATTGTTAGTTATTATAAATTTATAAACATATA
TAGGTATTCATATATCCTACAATTAATTTATCATAAATGAGAGCATTAAA
CCATAGTTCCTTGCACCCACTGCTCTACTACGAAGACTAATCCAACCATA
GAGCCTAGGAAGGAGTGCAAGCTTATATGTACTATTATGTGWGTGAGTGA
GCTGTTGCCTACTAATCATCCTCGCATGCACTCTACCTTTAAAGACAGGT
GAACAATTTTCATTCAAAGTCAAGTTTGTACTACAAATAACCAACTACAT
ATTATTTAGTCAGAATTTAAAAAGTAAGGAATGTTGAGTTAATCAATTTC
AGATTTGGATGAGGATGCAGAGAGAGAATGAGGGTTTGGAGGATGTTTTG
TCGGAATAAAAAGCTCCTGGGGATCCTCACTCTATCAGCTTCCCTCACTC
TTCTTGGATTATTTTTGTATAATACTCCTTCTCATGCAATAGAGAATCAC
AAACCGGGGGTAGGAAGAGATTACTATCCAAATGTTCCAGACTCAAAAAG
TCAATCTAAAAATAAACAACATGAATATATTGATAAGGATGGAATACGAG
TCATTGTTGGAAAGTATGTGGGGGATTCCCTATCTCCCAGAACGCCTTCT
CTCTCATGGGAAGACTTGAATGCAAATAATTATAATCCGATTAGAGGAAT
GGGAGAGAACGGAGAGGCAGTGTTTGCCTTAAATTCCCGAGAGGAAGTAA
CGATAATTATATATACGTGTATACTTGTCACTTTATCAATTAATTTTATG
ATAACCCTAACTAATAGAGTATCATCATAGCAAGACAAGTATAAACGTAT
ATAATTATGTATATCTAATATCATCAGGCATTAGCTAAAAGACTATGGCA
CATCAATAAATTCAATTTACTTGCTTCAGACAAAATATCACTTGATCGAA
AACTACCGGATGTGAGAAAAGAGTCATGCAAGAGTGTTGTRTATACATAC
TCTCGACTCCCGAGTGCTTCCATCATCATAGTCTTTCACAATGAAGCATT
TTCAACTTTACTTCGTACAGTTCATAGTGTTTTAAATCGAACTCCGAAAC
TTCTTCTATCAGAGATATTATTGGTGGATGACGCTTCTAATAAAACATTT
TTAAGACGCCCATTGGAAGATCATATGGGAGCTTTGAAGATAAATTATAA
AATTCTACGTCTAAAAGAGAGGAGTGGACTCATTCAGGCAAGGCTAGAAG
GAGCCAAAGTTGCAACCGGGAAGGTCCTGATATTTCTGGATGCACATTGT
GAAGTAACGACGGGATGGGTGGAACCCCTGCTTMCTCGTATAGCAGAGGA
TCCCAGCCATGTTGTGTGCCCTGTTATAGATATCATTAATGACGACAACT
TTGGTTACATAAAATCCTTTACTCTTCATTGGGGAGCTTTTAACTGGGAG
CTTCACTTTCGGTGGTTTACCATGAGTCAATCTTTGATTGATGATCTAAA
AACAAATCCAACAGCTCCTTATCGAACCCCCGTTATGGCCGGTGGTTTAT
TCGCTATTGACCGTCAATATTTTTATGACATAGGATCATATGATAAGGCA
ATGGATATTTGGGGGGGAGAGAACTTGGAAATGTCTTTTAGAATTTGGAT
GTGCTCAGGGTCWGTGGAGATTTCTCCATGCTCTCATGTGGGACATGTTT
TCCGTAAAGCTAGTCCTTATTCCTTTCCTAGAGAAGGTGGAGTTGGTAAA
GTCCTTAATACAAATCTTGCAAGAGTTGCACGAGTATGGATGGATGATTA
CAAAAAGTTTTACTTTAAAATTAATCCAACTGCCGAGAGCTTTGATGTTG
ATGTATCAGAGCGGTCTTCACTTCGAAAGAAGCTTGGTTGTAAGAGTTTT
AAATGGTTCCTAGAAAATATCTGGCCCCAGCATTTCTTTCCAACACAAAA
CCGTTTCTTCGGGGAAATCATTCATTTCTCAACAAATAAATGTATCAAAA
AGCCCCATTCCTCGCCTGCACTTAGCCAGAACAATGGGCCTGCATTGATG
GATTCATGTACATCTAAATTTTCAGTAACAGAGCTTATGGTTTTTAGTGA
AGATGGACATATAATGACTGATGAATCCGTCTGCTTGGACTCTTTGAATG
CTGAAGATGAAATCGAGGCAAGTGTAAGGTTTCAGTCATGCAATGAATCA
AACCGACAGCTTTGGAAATACATRCAATCAAACAAAACAATCATGCACTT
GAAATCAAAGAAATGTCTGAGTCATCCAAGAGAAGGAACAACAGATACAT
TGATTGTGAGTCCCTGTAATGGGAATTCTCTGCAGAAATGGACTTTAGTA
AAGGAAAATCCATTTGGATAGCTAACTCATTGATTATGTAAATCAACATT
AATTTGTAACAAATCTGTGATATGAACAACTAATAAAGTAATCACTTATA
AAATATATAATTATAATTTTTCATACCACAATTTCAGCTATCGACTTATG
AGCCTTCATTATTTCAATAATAACTCCATCTCCACCGCAATCCACTATTT
GTTTTGCGTTCTCAGGACTTCTTAAAGATAGGGCAGTCAGGGAATCACAG
CCCACTTGACATATGGACTTGTTTTTCTAAAATGAGTCATTATTTATATA
TAGATAAAAAACTCTTGATACATTTTTTAGAAATACATGTATATTAAGTA
GATTTCTTACTAAATTTATTGAAATGGAATTGACAATGAATGGAATTCCT
TTTGTGTTTCCGATATCCCGCTTGACATCATCATTTCCAGCGAGTGTTTT
GACTAATTTGAGTGATTCCTTGATGACATTTTTATCCTGATCAGGGTCCA
CAAGGACTTTTAAAATTATGTTGAG
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