EMLSAT00000000171, EMLSAT00000000171-696018 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000171
Unique NameEMLSAT00000000171-696018
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1025supercontigLSalAtl2s1025:41983..42776 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000171 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000171EMLSAG00000000171-682937Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000831EMLSAE00000000831-709759Lepeophtheirus salmonisexon
EMLSAE00000000832EMLSAE00000000832-709760Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770368auto770368Lepeophtheirus salmonispolypeptide
EMLSAP00000000171EMLSAP00000000171Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000171

>EMLSAP00000000171 ID=EMLSAP00000000171|Name=EMLSAP00000000171|organism=Lepeophtheirus salmonis|type=polypeptide|length=216bp
MKVEGFKAAPHSKGPQQKFLSQHSHNISTLALSSSGQFLISGEVTPNITD
KAEVIIWNVEHNGEVLHRYRLHSVGVKCVQISPNDIYAASIGKEDPSVLL
LKDLKSGALISGKKVFGQPFVPMSLSFLPGRDDVLVVGGLDXLVLWRVDE
EKKLSCVRITFGKIKRSVSDLFVKRVSKGESIAMCGTTSGDIVKVSLLVK
DDYNDTGESVHRYFIT
back to top

mRNA from alignment at LSalAtl2s1025:41983..42776-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000171-696018 ID=EMLSAT00000000171-696018|Name=EMLSAT00000000171|organism=Lepeophtheirus salmonis|type=mRNA|length=794bp|location=Sequence derived from alignment at LSalAtl2s1025:41983..42776- (Lepeophtheirus salmonis)
ATGAAAGTAGAGGGTAATTAAAGGCTTCTTTAACTCAAACGGGCTAGTGT
TACGTCTCTTGTAATAGAAACCGTATTACATCACGTAAAAACATAAAAGA
GTAATTGTATTCTAAAAATGCTTTTAAGTAACACACTTTACTTTTTACCA
CATTAGGTTTCAAGGCAGCCCCTCATTCCAAAGGGCCCCAACAAAAGTTC
CTATCCCAACATTCCCACAACATAAGCACCCTAGCTCTCAGCTCTTCTGG
ACAGTTCCTCATCTCAGGGGAAGTGACTCCCAACATTACAGACAAGGCAG
AAGTCATCATTTGGAATGTGGAGCACAATGGAGAAGTTCTACACCGCTAT
CGCCTTCATTCCGTCGGAGTGAAGTGTGTGCAAATATCCCCCAATGATAT
CTATGCAGCTTCTATCGGAAAGGAAGATCCAAGTGTCCTTCTTCTCAAGG
ATTTGAAGAGTGGAGCACTTATCTCTGGGAAAAAGGTTTTTGGACAGCCA
TTTGTACCAATGTCTCTGTCCTTTCTTCCAGGGCGGGACGATGTACTTGT
TGTAGGGGGACTGGATGSTCTGGTCCTTTGGAGAGTGGATGAAGAAAAGA
AGTTGAGCTGTGTTCGAATTACTTTTGGTAAAATCAAGAGATCTGTGAGT
GATTTGTTTGTCAAACGTGTTTCTAAAGGGGAGAGCATTGCCATGTGTGG
AACGACATCCGGGGATATTGTCAAAGTCTCACTTTTAGTGAAGGATGACT
ACAATGACACAGGTGAGTCAGTTCATAGGTATTTCATCACTTAA
back to top
Add to Basket