EMLSAT00000000172, EMLSAT00000000172-696019 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000172
Unique NameEMLSAT00000000172-696019
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1025supercontigLSalAtl2s1025:58623..58919 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000172 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000172EMLSAG00000000172-682938Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000833EMLSAE00000000833-709761Lepeophtheirus salmonisexon
EMLSAE00000000834EMLSAE00000000834-709762Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770930auto770930Lepeophtheirus salmonispolypeptide
EMLSAP00000000172EMLSAP00000000172Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000172

>EMLSAP00000000172 ID=EMLSAP00000000172|Name=EMLSAP00000000172|organism=Lepeophtheirus salmonis|type=polypeptide|length=85bp
MADKILLENSDGSVLPVNELPIVTAIGFTGSVQRGLIFDYDRRRVFYPLG
KTIVLRSDASFTNYSSEECKSEKEYSHNGCEESLD
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mRNA from alignment at LSalAtl2s1025:58623..58919-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000172-696019 ID=EMLSAT00000000172-696019|Name=EMLSAT00000000172|organism=Lepeophtheirus salmonis|type=mRNA|length=297bp|location=Sequence derived from alignment at LSalAtl2s1025:58623..58919- (Lepeophtheirus salmonis)
ATGGCGGATAAAATACTGCTCGAGAATTCTGACGGYTCTGTTTTACCTGT
TAATGAACTACCGATTGTAACTGCCATCGGATTTACGGGAAGTGTACAAA
GAGGACTTATTTTTGATTATGATCGACGTCGCGTCTTTTATCCTCTTGGA
AAGACCATTGTTCTACGATCCGATGCGTCTTTTACAAATTATTCTTCAGA
GGAATGTAAAAGTGGTAAAGTATATAATAATTAATGTAAATACATATTTA
TAGAAAAAGAATATAGTCATAATGGGTGTGAAGAGTCTTTAGACTAG
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