EMLSAT00000000180, EMLSAT00000000180-696027 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000180
Unique NameEMLSAT00000000180-696027
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1027supercontigLSalAtl2s1027:4047..7527 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000180 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000180EMLSAG00000000180-682946Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000848EMLSAE00000000848-709776Lepeophtheirus salmonisexon
EMLSAE00000000849EMLSAE00000000849-709777Lepeophtheirus salmonisexon
EMLSAE00000000850EMLSAE00000000850-709778Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768426auto768426Lepeophtheirus salmonispolypeptide
EMLSAP00000000180EMLSAP00000000180Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000180

>EMLSAP00000000180 ID=EMLSAP00000000180|Name=EMLSAP00000000180|organism=Lepeophtheirus salmonis|type=polypeptide|length=92bp
MIFNQQLSYDPFVRYTMGASNSNQKELEHLLDKKCPAGIPANLALLSIGA
AAAAGFAVILNELMMMRRKKRRLEEFEERIEKLFPNDNSGNY
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mRNA from alignment at LSalAtl2s1027:4047..7527+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000180-696027 ID=EMLSAT00000000180-696027|Name=EMLSAT00000000180|organism=Lepeophtheirus salmonis|type=mRNA|length=3481bp|location=Sequence derived from alignment at LSalAtl2s1027:4047..7527+ (Lepeophtheirus salmonis)
ATGATATTTAACCAACAGGTAAGTAAATAAATACCCTTTTGGGTACAAAG
AAACGGTCACCGATTTGCTTTATGTTTTATGCTTTATCAGTATATTTCGG
TGTTTATTAACTGGTGTTCCGTGATAAAAAAAAGTGTACAAATCAATAAT
ATACAAATGTGAAATAAAAAAAAAATTATTGTATTCTGGAGATTTTTTTT
TAAATCACTGATATATATTAGTTATATAATTACGAATGATCTCATAAATT
GAAATTTGTTGATTACTTATTTTCATAATACTAGTTAAAATAAACCATAT
CTTTTGAATGCTCAAAATTATTTTAGCATATTCAATTGGTTTTTAGTACA
ATGAACCCTGTAAGAAATTTAATTTCCGGTTGAAGAAACTTTTATTGAGA
CTTGGAAAGTCATTCAATCATTTAGCACTTTTCTTACTACTTTATCCTCT
TCATTTCTTTCTTAGCTTTTTACTGAATGATTCTTGCATGACGGGATTAG
ATATCAATGGGAAAAAAATGTAAAAACATATTTTTTAGCTACCCAAAAAA
AAAAACAAGGAAATCATTATTTTTTGTAATTTTCATATTTAATCTCAGTT
GTCTTACGATCCTTTTGTCAGATACACGATGGGAGCAAGTAATAGTAATC
AAAAAGAGTTGGAGCATCTTCTGGACAAAAAATGCCCTGCAGGTATTCCT
GCTAACTTGGCTCTTTTATCAATTGGTGCAGCTGCTGCGGCAGGGTTTGC
AGTGATTCTTAATGAGCTCATGATGATGAGACGAAAGAAAAGGAGTCTTT
CCATTCGGAGGAAATCTGATGATCTGACTCTGAATCATATAGTTCAAGGT
ATGAAATATCTTTGTTATCGCACAGTGATATACTTAAACACATCAAAACC
TCATATATATTTTTGTAAATTGTCAATTTTCTACTAATTTTTCTCATTAT
TACTATTATTAACGTTAACTGTTTCATTCTGAATAAGCTACTTTTAAGCT
GTGAACAATTTTCTTCTAATAACACGACGTTATCAGCTCGCCCATATGAA
AATTTACAATGTAGCTGGCTGTCAATAGTAGTTTCGTGTATTTGTTTTTA
TCATATCAGTGATTTGAACGATGGATTCGAATTAACTCTTTTAAGTTTTA
TAATTTTTTTTGCTACAAACTCTAAAGGAATGGCTGAAACGTACTAAATT
TGTGTTAATAGAAAAATTATATATTGAAAAAAGTAGACAATCAACTATTA
ATCAGTATAAAATTTACAATTCTCAATTTATATAAAGAAAAGTTTGYCTG
CCATAAAGTATTCTGTCACCAGGTACTTTTGCAATGTAAAATGTCCTGGG
GCAAAATAGTTTAAGGTAAAAGTACCGTTTACTAAAAGTTTCGCTCCTGC
CTTTTTCTTGTGTCTTTTATTTATCACTGTGAGCGAAGAAGAATGGAATC
GGAGGCTCGTTTGACACATGGATATTTTTTTTTTTTTGAAAATCAGTTAA
TAAAWAAATTAGGTCAATAGTAATTTATCTATATTTATTGTTATTAGGGG
CCAGAAAAATATGTTAAGCTTTTTAGAAAAATATGTTGTGAATATGTGAA
GAAAAATGCCAAAATATGTAAGGGAAAAAAATGCCAAAAAATGTTCTTTG
TACTGTATTTTCCATATTCAATTTTGAATTTCTAAGCCTCGACAGCAAAG
GATTTTTCCTTTACTTTTTAGAAATTAATCTTGTGAATTCAATTAAAAGT
GTACATCCATGGATATTGAATAGTTTTTGAGAGAGTGGTTGATTATACCC
TCAGCACTTATAGCGAACCAAGAAGTGTTATCGTAATTTTTTTACAAAAA
TTGATTGTGTGGTCTTTATTTTATAGCTTAGGTAAAGAATAAAAGAAGGT
GATATACATGGGCTTAGTAGATTTGTCATGCAAAGCTGGGATATTGCTGC
TACAAAATTTATTTTACAAATTCAATATTTAAAAATGTATAATGAAGGAC
AAAATCCAACAATTTTTCTCTAAAAAATGTAAAATATCCTATATTTTTCC
ACTACTTAATTATTATTAATCTTCACTTGATTTTAAACTTTGTTACATTA
TTTTATAGGGACAAAAATATTTATAAAAAGGAAATAAATTATGCGAGCGA
AATGTGAGTACTTTAGAATTGCGTGACAATGAGATCTAAGACATACCAAT
ACATCAACGATTATGTACACTTAAAGCTTAACATATTATTTAAAAGAAAA
TGGAAGTACATTGTAGATATGTAGTCAGTCAACATAATAACAATTTCGAA
CAAAATGAAAATAATAGAAAATCACTTTTTTTTAAATTCATATATACATA
GGTGCATACTAATATTTCATACACATATTTGAGTCAATAATTCAAACTTT
CAGGATGCACTTAGATACACAAGGATGTTAGCTCTAGTTTATAAACTTTA
TTTGATTAGAGATACTTTTTTTTAAAGATAAAATCTATCATTTTCTCATT
CTATTATTACGACGATCAATTTTGCCCACTTTCAGTGCAATTTGCAGAGC
CTTTAAACGCTTAAAATGTTAATCTACGTCTTAGATGCACTAGTGATTAT
TTTATACTTTGATGTTTTCTCTTCGAGAATAAAATAATAATGATAACACC
TTGGAAAATAAAATAAAAACTTTTCAAGTTGCAACTACAAAAAGGTTTGC
ACTGGTCCAATATCATATTTTTTTACAACTATTGTGATGAAACTCCGAGC
AATGTAGAGTACAATCGTTAGTTGAATGATAATTCCATAGTTGGTGGGAA
ATTGGCTAACTACCATTTTCTTGTTTTTCATGTAGGAAAGATCACAAAAT
ACAATAAAAGATAAGATATGTTAAACGAAGAATTATTTGCAAGAATTTGC
TAACCACCCTATAACTTGAGGCCTTTTTTTATTTCTACTTTTTTGGAGGA
ACTGTTGAGAGATGCAACAAAAATGTTATGTATTTGTTCAAATATCCCCA
AATAGTGCTGTCACTTATTATTAGTTCATTTCATTTACTTTTCATTGCCT
ATAATAAATATTAAGAGAAACATATTCGTAAGAACAATAAAATCTATGTA
AAAAAAAAACATTTCCCATTATATATAAATTAGTACAAGTTAATTGATAA
TTTGAACATCTTAATATAACTAAATATTGACGAAAAAATTTATAATATCT
TATACTATTCCAGGACTCGAAGAATTTGAAGAGAGAATAGAAAAGCTTTT
TCCTAATGACAACTCTGGAAATTATTGAGTTGTACTTCAATTAGCATCCC
AAAGATTCAATTAATAATAATTATCAAAATACATTTAGAATCATTTAATT
AACGCCATCAAGTTATATTTTGTTATGAATATTGTGTTTTATAATATATG
TATATGTGAACATCAGGCAGTGGCTTAATGCATATGTTAAGTAAATATGC
ATGCTAAAATTACCAAATAGTTTAATTTCCA
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