EMLSAT00000000186, EMLSAT00000000186-696033 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000186
Unique NameEMLSAT00000000186-696033
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s10297supercontigLSalAtl2s10297:87..1441 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000186 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000186EMLSAG00000000186-682952Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000873EMLSAE00000000873-709801Lepeophtheirus salmonisexon
EMLSAE00000000874EMLSAE00000000874-709802Lepeophtheirus salmonisexon
EMLSAE00000000875EMLSAE00000000875-709803Lepeophtheirus salmonisexon
EMLSAE00000000876EMLSAE00000000876-709804Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767762auto767762Lepeophtheirus salmonispolypeptide
EMLSAP00000000186EMLSAP00000000186Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000186

>EMLSAP00000000186 ID=EMLSAP00000000186|Name=EMLSAP00000000186|organism=Lepeophtheirus salmonis|type=polypeptide|length=382bp
MYNSRKKHREQSMVDDEDVSXLLTEFTISFVICGYGNLIQNLRLKLMTEK
PPSTFTVLHSRFLWLITFFMSFVEDLEVELREIEPVFSPEIMSYIVFEGL
QTFENLEIESKPHLYNDTVVKTQGRRLHLVVSAIKQILITINWMDNNTKD
SETRLKIHRIILLLMEMSNLRQFHLLLIWKFNLSYQTRCFINDVVMCNHK
LLLLFEKVNSSDKFIKEHLEQFATVEVMRKYGYCLETFESNTVSLNEAIF
TMIHHVSVDLNAHEALLIPEILNTFSNLLENDLFVGDRWSDLIDYVVQRL
MNTIHGDPINVPPRFVENVIEEDQSSQYFKANDQLQLIPLRNNKKINNLQ
WYYSECKNSEDPVGSIIDLYKEAENEILTRES
back to top

mRNA from alignment at LSalAtl2s10297:87..1441+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000186-696033 ID=EMLSAT00000000186-696033|Name=EMLSAT00000000186|organism=Lepeophtheirus salmonis|type=mRNA|length=1355bp|location=Sequence derived from alignment at LSalAtl2s10297:87..1441+ (Lepeophtheirus salmonis)
ATGTATAATTCAAGGAAGAAGCACAGAGAACAGGTTAGTCAATATTCATT
GAGCCATCTTTGCTTTTTTAATAACTGTGTAGTATAAATYATTTTGTTTG
TTCTTAGTCAATGGTTGATGATGAAGATGTCTCAAKACTTTTAACAGAGT
TTACTATTTCTTTCGTTATATGTGGCTATGGAAATCTCATTCAAAATTTA
AGATTAAAATTAATGACTGAAAAACCACCGTCCACATTTACAGTCCTGCA
TTCTCGTTTCCTATGGTTAATAACTTTCTTTATGAGCTTTGTAGAAGATT
TGGAAGTAGAATTACGGGAGATTGAGTATGTACTTTATTCAATGGCCTTT
TAAGMTTGATAGCTTGGCRCTATTTATATTTCATTTCAGACCAGTGTTTA
GTCCAGAGATCATGTCCTATATTGTATTTGAAGGTTTACAAACATTTGAA
AATCTTGAGATTGAATCAAAACCACATTTGTATAATGATACTGTGGTCAA
AACGCAAGGGCGTCGTCTTCACTTGGTTGTTTCTGCAATAAAGCAGATTT
TAATAACCATTAATTGGATGGATAATAATACAAAGGACTCTGAAACGCGT
CTTAAAATACATAGAATCATTTTGTTACTGATGGAAATGAGCAATTTGAG
ACAATTTCATCTTCTATTGATTTGGAAATTCAATTTATCTTATCAAACAA
GGTGCTTCATCAATGACGTCGTCATGTGCAACCATAAGCTACTTTTATTA
TTTGAAAAAGTTAATTCATCTGACAAATTTATAAAGGAACACTTGGAACA
GTGAGTATAGCTACTTATATATGAATATAGTATGTAATTTAAAACTATTA
AGTCATGTTTTTAAATGACAGATTTGCTACGGTAGAGGTCATGAGAAAAT
ATGGTTATTGCCTAGAAACATTTGAAAGCAATACAGTATCATTAAACGAA
GCTATTTTTACGATGATACACCATGTTTCCGTTGATTTAAATGCACATGA
AGCTCTTTTGATACCTGAAATTCTAAATACATTCTCCAATCTATTGGAAA
ATGATCTCTTTGTCGGGGATAGGTGGTCCGATTTGATTGATTATGTGGTG
CAAAGGTTAATGAATACCATACATGGGGATCCAATCAACGTACCTCCTCG
TTTTGTAGAAAATGTAATAGAAGAAGATCAAAGCAGTCAGTATTTCAAAG
CAAATGACCAACTACAACTTATACCTTTAAGAAATAACAAAAAAATAAAT
AACCTTCAATGGTATTATTCAGAATGTAAAAATAGCGAAGATCCTGTTGG
ATCCATAATTGATTTGTACAAAGAGGCAGAAAACGAAATATTGACACGAG
AGTCT
back to top
Add to Basket