EMLSAT00000000187, EMLSAT00000000187-696034 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000187
Unique NameEMLSAT00000000187-696034
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1029supercontigLSalAtl2s1029:114454..116714 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000187 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000187EMLSAG00000000187-682953Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000877EMLSAE00000000877-709805Lepeophtheirus salmonisexon
EMLSAE00000000878EMLSAE00000000878-709806Lepeophtheirus salmonisexon
EMLSAE00000000879EMLSAE00000000879-709807Lepeophtheirus salmonisexon
EMLSAE00000000880EMLSAE00000000880-709808Lepeophtheirus salmonisexon
EMLSAE00000000881EMLSAE00000000881-709809Lepeophtheirus salmonisexon
EMLSAE00000000882EMLSAE00000000882-709810Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772515auto772515Lepeophtheirus salmonispolypeptide
EMLSAP00000000187EMLSAP00000000187Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000187

>EMLSAP00000000187 ID=EMLSAP00000000187|Name=EMLSAP00000000187|organism=Lepeophtheirus salmonis|type=polypeptide|length=373bp
MGNNQSCCSYSLSRSSGSENERRXKNEKGGRKEXSSNGTLNFPTKSDSTP
NLGNNGSMVPSTKKREESCGNLQHISEREPDDWEEDPSLHPTTETIFMEK
TKRILQPKNGLVKSQNGLAHSRSCSTLKKSSSCSTIFLDDSTVSQPNLKN
TIKCVSLAIYYHIKNRSSSTMVLDIFDEKLHPLTKESVSADYNQFNPELR
TIFKFIRTLFSAAQLTAECAIITLVYLERLLTYAEVDITPGSWKRITLGA
ILLASKVWDDQAVWNVDYCQIMKDLTVEDMNELERQFLEMLQFNINVPSS
VYAKYYFDLRTLAEANDLSFPAEPLSKERAQKLEAMSQQCEERISQEILQ
GGIKKWSSLDKLSVNRRSVAILS
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mRNA from alignment at LSalAtl2s1029:114454..116714+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000187-696034 ID=EMLSAT00000000187-696034|Name=EMLSAT00000000187|organism=Lepeophtheirus salmonis|type=mRNA|length=2261bp|location=Sequence derived from alignment at LSalAtl2s1029:114454..116714+ (Lepeophtheirus salmonis)
TATTATTTAGTCCGTTGTGGGTTTTTTTTTCATGCTCCATTTAAGTACTT TGAACAACTTGCATGGGTTGAACACCTTTTTGCTCTTATTAAGCGATTCC CAACTAGTAATTAAAAAGAAGAGTTCAGAAATTCGGAAGAATTGAGTTAC TTGTAACTACAATTTCATATGTAATTTGAAGCCATTTGGGTTCAGTGATG TGATTTTGGGTTAGAAAAGGTTGGGAGATGGAATGGAGATGAGAAGACGC ACAGCATCGTGAAGCTGAATGACAGCTAAATAAGAAGAAGAGGAAGCTGT TGCATGATGTGATCGCTGATTGGAGGTTTCTTCTCCTCTTATTTATCTAG TTTCTTTTCTTTCTTTGAGTGAATTGAAGTTGAGAGTTGCCCTCTTTTAG TCTTTTCTAATTGGTAATCACTGATCATTAATTCCGAATTGAGAATTCTA GTCGTGTTCTGAGAGGATTTATTCTCTATGGAGAGAGACACGGAATCTAA TCTTGAGCTGTGACTGGTACAAAAATGGGTAACAATCAGAGTTGCTGTTC CTACAGTCTTTCCCGTTCCTCTGGGAGTGAGAATGAGCGGCGGRAGAAGA ATGAGAAGGGTGGAAGAAAAGAGAGKTCCTCCAATGGAACCTTGAACTTT CCTACCAAATCTGACTCCACTCCGAATCTGGGGAACAACGGGAGTATGGT GCCTTCTACAAAGAAGAGAGAGGAGTCTTGTGGGAATCTGCAACACATCT CAGAACGCGAACCAGATGATTGGGAGGAAGATCCTTCGCTTCATCCAACC ACTGAAACTATTTTTATGGAAAAAACAAAACGTATTTTACAACCCAAAAG TAAGATTTCACATTTAGACTCGGATAAATGAATTTTCATTTCATATAATT TATAAATATATTTGTGTCTTCTTTTGTTTTAGATGGCTTAGTCAAAAGTC AAAATGGTTTAGCACATTCCAGATCTTGCAGTACTCTTAAGAAATCAAGT TCATGTTCAACTATCTTTTTGGATGATTCCACTGTTTCACAGCCTAATCT TAAAAATACAATTAAATGTGTTTCATTGGCCATATATTATCACATCAAGA ATAGGTCCTCTTCCACCATGGTTCTTGATATTTTTGACGAAAAATTACAC CCTTTAACAGTACATTTTATGCTTGACTTCAAATCTGTAATTTTCATTAT TTATTTTTTTTCATTACTAGAAGGAATCCGTCTCTGCAGATTATAATCAG TTTAATCCAGAATTGAGGACGATTTTCAAATTTATCCGCACTCTTTTTAG CGCTGCACAACTCACTGCGGAGTGTGCCATTATTACCCTTGTTTATCTGG AAAGGTATTCAGCATAAAATTCTATATTTGATCATTAATTACTATTGATG ATCATTCCAGGTTACTTACATATGCTGAGGTTGATATTACACCGGGAAGC TGGAAGCGTATCACTCTAGGTGCCATTTTACTAGCTAGCAAAGTATGGGA TGATCAGGCGGTCTGGAATGTTGATTACTGTCAAATCATGAAAGATCTTA CTGTTGAAGATATGTAAGTTCTTATATGTAATTTTGGATTAGTAATTGAA TTAATCTTATGTTTACAGGAATGAGCTAGAACGACAATTTTTAGAAATGC TACAGTTTAACATTAATGTACCATCTAGTGTTTATGCTAAATATTACTTT GATCTTCGAACGTTGGCTGAGGCAAATGACTTATCATTTCCTGCCGAACC TCTATCAAAAGAAAGGGCTCAAAAGTTGGAAGCTATGTCACAACAGTGTG AAGAAAGAATTTCACAAGAAATTCTACAGGGTGGAATTAAAAAATGGTCA AGTTTGGACAAATTATCCGTAAATCGTCGAAGTGTGGCTATTTTGTCATA AAATTAAAATTCGCTCTTCTTAATAGTTTATTATTGGTTTGAACATATTT ATTGTGGCGTTTATTAATTTTCCTTGAAACTAATATAAATTTAATGGCAC ATTTCTTTTCATATTTTATAAACGAACTATTTGGGCCCTAGACATTATTT TGTTTGAACTATTGTTTTTTTCAGCGGGGGTATCTCCTTCAGTCGCGTTA TTCTAATCATATAACAAGTATACAGTTCGGATATAACATAATTTATGTTC TCAGAGTATGTTTTTTATATTTTTGAAAAATAAGTTATAGGTCTGTTATT AAACACCCTGTATTCTTCATTGAAACCATTTCCATTCGTTTGTATTTGTC ATATTATATGG
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