EMLSAT00000000193, EMLSAT00000000193-696040 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000193
Unique NameEMLSAT00000000193-696040
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1029supercontigLSalAtl2s1029:171128..171573 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000193 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000193EMLSAG00000000193-682959Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000893EMLSAE00000000893-709821Lepeophtheirus salmonisexon
EMLSAE00000000894EMLSAE00000000894-709822Lepeophtheirus salmonisexon
EMLSAE00000000895EMLSAE00000000895-709823Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773799auto773799Lepeophtheirus salmonispolypeptide
EMLSAP00000000193EMLSAP00000000193Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000193

>EMLSAP00000000193 ID=EMLSAP00000000193|Name=EMLSAP00000000193|organism=Lepeophtheirus salmonis|type=polypeptide|length=92bp
MSFCSRWNKGEVYRDHFSSGKYVCSQCDNDLFSSESKFEHQTPWPAFYHP
IRSDSLSKKQERKNAYKVSCGKCGNGLGHEFLNEGPKGNSRF
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mRNA from alignment at LSalAtl2s1029:171128..171573-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000193-696040 ID=EMLSAT00000000193-696040|Name=EMLSAT00000000193|organism=Lepeophtheirus salmonis|type=mRNA|length=446bp|location=Sequence derived from alignment at LSalAtl2s1029:171128..171573- (Lepeophtheirus salmonis)
ATGTCATTTTGCTCTAGATGGAATAAAGGAGAAGTGTATCGGGATCATTT
TTCCTCGGGTATTATATATTTTTCTAATTAATATTGAAAGATTTGAATGT
AGATATATTTAATTATTATATATTCTATTAAATCTCTTATTCGACAGGTA
AATATGTATGTTCCCAATGTGATAATGATCTATTTTCAAGTGAGTCCAAG
TTTGAACATCAAACCCCTTGGCCAGCCTTTTATCATCCCATCCGTTCGGA
CTCTTTATCTAAAAAACAAGAAAGGAAAAACGCATATAAAGTATATAATG
TTTTCCCTGGCTAAATTTATATTTTAATGAAATTATATTATTAATTAAAC
TTACTTTTTTTTATTAAGGTTTCTTGCGGAAAATGTGGCAATGGCCTAGG
ACATGAGTTTCTTAACGAAGGCCCAAAAGGAAATTCGAGATTTTGA
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