EMLSAT00000000203, EMLSAT00000000203-696050 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000203
Unique Name	EMLSAT00000000203-696050
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s102	supercontig	LSalAtl2s102:1245707..1250720 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000203 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000203	EMLSAG00000000203-682969	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000000936	EMLSAE00000000936-709864	Lepeophtheirus salmonis	exon
EMLSAE00000000937	EMLSAE00000000937-709865	Lepeophtheirus salmonis	exon
EMLSAE00000000938	EMLSAE00000000938-709866	Lepeophtheirus salmonis	exon
EMLSAE00000000939	EMLSAE00000000939-709867	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780558	auto780558	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000203	EMLSAP00000000203	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s102:1245707..1250720-

protein sequence of EMLSAP00000000203

>EMLSAP00000000203 ID=EMLSAP00000000203|Name=EMLSAP00000000203|organism=Lepeophtheirus salmonis|type=polypeptide|length=274bp
MIHSIKRIGFIGAGKMALALARGFAEKMKPNAILASSPASDEVFLKEFRS
HGFDTYHSNEFVARNVDTVILATKPSILPTIFKELHDTIQPNQLLISIAA
GIPIKMIQESLSMGDTLKVIRVMPNTPSLVNEGVSIYSLNHQCDLKDQKI
IEEMFSCVGSIYKIDETLIDAATGISGCGPGYMYLVIEAMGDAGVKQGLP
RDLAYKLAAQTMIGSGKMVLQTGQHPAVLKDSVCSAGGSTIAGISALENE
GVRGAFIKAVEVATLKCKDLGNNN

mRNA from alignment at LSalAtl2s102:1245707..1250720-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000203-696050 ID=EMLSAT00000000203-696050|Name=EMLSAT00000000203|organism=Lepeophtheirus salmonis|type=mRNA|length=5014bp|location=Sequence derived from alignment at LSalAtl2s102:1245707..1250720- (Lepeophtheirus salmonis)
ATGATCCACTCAATTAAAAGGTAATTATTAGCTATAAATGGTGAGTGCAT
GCTTTAAGAATTACCTAATTAGGAAGAAAACATTATCTCCTAAAACATAA
CTTTTATATATACCTATAAGATATCCACTTATACATTTATTTACTATGTA
AAAATAAAATTCACAATAATTTATATGTATATAATGTATTTCTAAATATA
AAGCAAACTTTACATCCATTAAGTTGAAACTCCACAAAGGCTAAAATGAT
TATTTTAAGACGAAGTAAGGAATTATTTAACGGAACCATTATCGTTATTT
ATTATTGTGGTAACCATTTATATATTACGTCATATTAGAAAGCAACAGTT
GACTTTGCATTTAAGATTCTAGAGCCTTAGAGTATTATGAAATTTTGCAT
GCGTATATTGTATATGTTGTGTACAAGTTGTATCAAACAGATTACACAAT
TTAAATTTATTGAGCCCATTGTCCTTTATTTAATGATTACATCTGTTAAC
TTAATTACCATCTATTTATTGATATGCTCATTTCATTTTGATGTTTAGAA
AAAGTACAACTAGAGACATCTGATCTTTATAATTTTCATTATAATTCTTA
TCATTTAGTAATTAACATTAAAAAGGTTAGCTATTACATGATGAATATAT
GTAATATATCCATGGAATATTCAATTAACTATTGTATTATCATTCCATGC
TATGAGGTAAATCGTGATCAATAAGGCGCTTTCTCAGGGTCGAGGGTATT
CTGTTACATTTCTATAGGTTTGACCTCCTCAAAAGACAGGACATGAATAA
AAAATTGTTTGTAATTGTAGTTACTGCGTGACGTTTACTAAATAAATACA
ACAACTACAATTTTTCTTTCATGTCCAGAGGTATAGTATAAATAAGACCA
AAGTGACTATATATAAGGTGTGTCAATAAGAGATTTCCTTGCTTTTGTTT
ACAATTTTTACTGGCTATTTTGATGACGTTATAGAGGAGTCAATTCATAA
AAAAATTCAAATTTATGTAACTAATAGTATTAATACATAATATTTTATTT
TTTTATCAGAAGATTCTTTTAGTGTAAATTTTTACCCTCTGACGATTACA
GTACTAAAATTAATTAAAAGAATAAACTAAAAATTATTTTGAACATAAAA
AAAATAGTTCCGAAAATATATTTTCAAATTAATATAGTATAGCGAAGAAA
TTAATAATATATTAAGAATAAGTGGATATTATGCACTCAATATGAAATGA
TCATTTGAAAAACATAAACTAACAATAAGATCTTAATCTGTCATTTATTT
TGAATTTTATAAAATAGAGTTCAATGTAATTATTCTGCCAACATAACCAA
ATATGATGGCATGAATAACCCTCTTTTGCCTTGTGATTTTTACTCTTCTC
TCTAGAAATATATATATTAATTATACTATGGAAATCAAATTTTATAAAGC
ATCCCCACTTTTATATAGCATGAAATAGTTAGTAGTACAAACCAATAATA
CTTATTTAACTAATATTAGGAATTATATTGAAGTCTCTACTTGCCTGACA
AGAATCTCAATAAGGAAATAGCATTTGCAAGTCCAAAATAAAACCTAATG
TATCAAATAATCGTAATATAATTTTGATACATTTTTAATATTGTCTTGAA
GCAACTTATACTTAGCTCGTATGGTACACACGAGGTAATTTTTTTTTTTT
TTTTTGTAGATTCTAAATCATTGCAAAAGTAATATTTCAATATGGGGAGA
CACCAATTTGGTTGTTTAGAAAAGGATTCCCGAATCAATAAGTTAGGGAA
TTTTAATGAGACTCAGCATAAGCCTACAGAAGTTAAGAGATTTCCTATAT
ATTTTGCAAAAAAAACATAATCATTTAATTATCTATTCTGTAACAGCAGA
ATAGAAAATGCTTTGCAGACCAAAATATCGAAAAAAAAGAGAAGCACATT
ATTTTTACGAGTCTAAAATCATCTTCCACTTGTTTTTCAATAACTAAATA
GACTCACAAGTAATACAGAAATCACTAATCAGGGGTCAGGCTTAAAGTGT
CCAGGTTATTTATTTATCCATATCGACCATACATTTCTGCATTATATGCA
TCAAGGACACTTATGAATGAAATAGTGTTCTTATACTAGAGGACGAGGAA
GAGTTAACTTAAGGAGAAAAGGACCCAAGAACTTAAGTTAAGGAGTAGTG
TATGGAGGATGAAAACTATTCATATTCCTCACTAGATCTTTCAATTGATT
ATTCTGTCGTTTTATGGAGCTCCATAGTTCTTATATGTAGAAGTATACGA
TGATCTCCTTAAAGATCTGGTAGAATTTATAAATTCTTGAGCATAGAGGC
AATGATTTTATTAATAAAGTAATCATCCTTTCGATCCTTTCTTTTTCTTA
ATTATTTATTTAAGATTTACATAATATATACCTATCGTACATCCTATGTC
AAAAAGATGACACCTAACTTTAAAGTATAAAATATTGGATGTACCCTTTA
TTTTCAGTATTTTTTTAGTAATGAAACTTGTACAAAAATGTTAAAGGTAA
CGTCTGAAGCGGTCCCAGGTTAAAACATTCATTCTACGTTAAAAAAAAGT
TTTTATTTCAGTTCAAAAATCTGGTCTTCGTGGAAGAGATATTAAATGTG
TTCACATGACTTCAAATAGATTCTTGATACTCATGAAATAAAAAGGAAAT
CATATCGTACCAAGTCAATTAGGTTTTGCCATTTGATTTTTAACCATAAA
AAATACATTTCTCCCCATAGATTATACAAGAGACGGATAAGAAGATTTCA
AAATATTTCACTTAATTAAGAAAATACTATTTTTTTCGTTCAAAAAAAGT
TTTTGTTTTTTGTTTTAAATTATTGTTTTTGTTAATCACTTTATGGAGCG
GAGTCCTCATAACATTTTTCAAGATATTGCTAAGCTTGAACGGAACTTCA
TCCCATCAAGAAGTAGTGTAAAACTAAAACCCAATTTTTTTATTCATTCT
TTCGGAAATAACTAAAGTTGCATCATACTTAGCTCAATAACTCACAAACT
AAAGAGCAGATTGTCATGGAATTTTGACAGATGTCTTTTAAAGGTTGGTA
CTAACTGAAAATGAGGTGAATTTTTAAAAGCATAACTCCATCTATGAGTT
AAGCCCATATGTTATGAATTAATTATTTAATTTATCCTTTTTAAGAGCTG
TTTCACTTATAAAATATATTTATCTTTAGATTTCTAATTTTATGAAGATG
CCAGACTGTTGTTTTATCCCGGGATGCAAAACAGGTCATTCGGTTTATAA
AAAAAAAAGGGGAGAATAAATTGCCATCAAATATCAAAGAGAAATATAGA
TGAATAAAAGTCATTTTAATCTTAGGCCCGACTAGACTTATCCCTCAAAT
ACTAAGAAATCTCTAATGCAGAATTCCTTAAAATACGTAACAGGTGAGTG
GCCTCTCTGCATCATCAAAAATGTTATAAATAGCAGTTTTATTTATTATA
AGCATTGTAATAAGTGGAAAAACTTTGATAAGGCAGATTGTACAACTGAT
CAAAGAAACATATCAAAATTATAAGGAACATATGAATAAATACATACCAA
AAAGTCTAATATTATTCGATAAAGTATTTTCTATGTATACTATTTTTCTA
GGTTTTTTTCAGCCATTTATATTTTTTTATTGGTTACAAAACATTCTTGA
CCTTTATATTAATCTCATTTTTTGTAAAGCTTTCCAAATACCCAAATTTC
GAAAATAATTATAATTTATTTTGTGCGCGTAGCTATGTTTTATATGCCGA
CTAATTTTGTTATTGTTTCATTCTTTTTTAGTGTATCCCATTCAACCTGA
TATGGACTAACTTTTTGAAATAAACAAAAATCCTATGTATTACATCCTAT
TCTATGAAAAATATGAGGATTGGATTTATTGGAGCAGGAAAAATGGCCTT
GGCCCTAGCTCGAGGGTTTGCAGAAAAAATGAAACCCAATGCCATTTTAG
CATCATCTCCAGCGTCAGATGAAGTCTTTTTGAAAGAATTTCGCTCTCAT
GGTTTTGACACATATCACTCAAATGAATTTGTTGCTCGTAATGTTGACAC
TGTGATTCTTGCTACAAAGCCTTCAATATTACCAACGATATTTAAGGAGC
TGCATGATACTATTCAACCAAATCAACTTCTCATTTCTATTGCAGCTGGT
ATTCCAATCAAAATGATACAAGAATCTTTAAGTATGGGTGATACACTCAA
AGTAATTCGAGTAATGCCAAATACTCCTAGTTTGGTGAACGAAGGTGTTA
GTATTTACTCTCTAAATCATCAATGTGATTTGAAAGATCAAAAGATAATA
GAAGAAATGTTTTCATGTGTTGGCTCAATATATAAAATCGATGAAACCTT
GATAGATGCAGCAACAGGCATTAGTGGATGCGGACCAGGATATATGTATT
TAGTTATAGGTTCGTTTAATTTCGACAATTTTTATTTGTAAAATATGAAT
ATATTTTTGTAGAGGCAATGGGTGATGCTGGAGTCAAACAAGGACTTCCA
CGCGACTTAGCGTACAAGTTAGCTGCCCAAACAATGATAGGATCTGGTAA
AATGGTATTGCAAACAGGACAACATCCAGCAGTCTTGAAAGACTCCGTTT
GCTCGGCTGGTGGCTCTACCATTGCTGGTATATCGGCTTTAGAAAATGAA
GGTGTTCGAGGTGCATTTATAAAAGCAGTTGAAGTTGCAACGTTAAAGTG
CAAAGATTTGGGAAATAAGTGAGGCATTGTATAAGTATTTAAAATATACT
CTTGATTTGATACTAAAATATTATGAAATATAGTTTACKTAAACTTCRTA
TATGAATTAAATCAGAATAAAAATAAAGATTATTTATTATATTTACCTCA
TGAAAGTTGATCATTTCATATTTAAATGAATAATAAAATAACAATAACCA
TTTTTCTCTTATCATATGCCATTTTTCATATTAATATAATACTTCACCTA
TTTTAAGTAATTAA

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