EMLSAT00000000216, EMLSAT00000000216-696063 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000216
Unique NameEMLSAT00000000216-696063
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1031supercontigLSalAtl2s1031:141059..142040 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000216 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000216EMLSAG00000000216-682982Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000991EMLSAE00000000991-709919Lepeophtheirus salmonisexon
EMLSAE00000000992EMLSAE00000000992-709920Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773138auto773138Lepeophtheirus salmonispolypeptide
EMLSAP00000000216EMLSAP00000000216Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000216

>EMLSAP00000000216 ID=EMLSAP00000000216|Name=EMLSAP00000000216|organism=Lepeophtheirus salmonis|type=polypeptide|length=293bp
MVIQILGGRTLLSIPGSIQEFFNENPEIGESNLALTSREHVDMWRXRXLF
IKQRQQATSDIRENDKVQWIGSHAAMTCHILVMKHTVTGVVSMGHFDNFC
CWQFVSNTYYYFIFIKIKGALSRGFIDDGRIEVTIVGGXTDIRGDAAKNS
MSLLRAIQQVPTILNLIHFCVGPYNXTVDNGSTTAILKGICVDLKTKTLF
PAMFNWCQFSDFKTQIEDRFRTRNGVGEQMDSEDRFKTKDSTFKPKSLRN
TANRNKLIEPKINTERAQNKHIDNKKNSFKFSYFNRINDINGN
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mRNA from alignment at LSalAtl2s1031:141059..142040+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000216-696063 ID=EMLSAT00000000216-696063|Name=EMLSAT00000000216|organism=Lepeophtheirus salmonis|type=mRNA|length=982bp|location=Sequence derived from alignment at LSalAtl2s1031:141059..142040+ (Lepeophtheirus salmonis)
ATGGTAATCCAAATCCTTGGAGGCCGCACTCTCTTATCCATACCAGGATC
TATACAAGAATTTTTCAATGAAAATCCTGAAATTGGAGAGTCTAATTTGG
CTCTTACAAGTAGAGAACATGTGGATATGTGGCGGGYTCGAGMCCTTTTT
ATCAAACAGCGTCAGCAAGCAACGAGTGATATTCGTGAAAATGATAAAGT
TCAATGGATTGGATCTCATGCTGCTATGACATGTCATATCCTGGTTATGA
AACACACTGTGACAGGAGTTGTCTCTATGGGACATTTTGATAATTTTTGC
TGTTGGCAATTTGGTGAAGAGAGTTCTGCTCATCGAGAGGGCTTAGATAT
TATGCTTTATGAGATAGGCACGTAATTTTAATTAAAGATAATTAATTAAT
TACTGTTTCCTAGTATCTAATACCTACTACTACTTTATATTTATTAAAAT
TAAAGGGGCTTTATCACGGGGATTCATCGATGACGGCCGGATTGAAGTAA
CTATAGTGGGAGGGMATACGGATATTAGAGGGGATGCAGCCAAAAATTCA
ATGAGTCTTCTTAGAGCAATACAACAAGTTCCTACGATTCTTAATCTGAT
ACATTTTTGTGTCGGGCCATACAATKCTACGGTGGACAATGGATCAACTA
CTGCCATACTCAAAGGGATTTGTGTGGATCTCAAAACCAAAACATTATTC
CCAGCAATGTTTAATTGGTGTCAGTTTAGTGACTTTAAAACTCAAATCGA
AGATAGATTTCGGACTAGGAATGGAGTGGGTGAACAAATGGACTCAGAGG
ATCGTTTCAAAACCAAGGACTCTACTTTTAAACCAAAGTCTTTGAGGAAT
ACGGCAAATAGAAATAAACTAATTGAGCCAAAGATCAATACTGAAAGGGC
ACAGAACAAGCACATTGACAATAAAAAGAATTCTTTTAAGTTCTCCTATT
TCAATCGAATAAATGATATCAATGGTAATTAA
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