EMLSAT00000000219, EMLSAT00000000219-696066 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000219
Unique NameEMLSAT00000000219-696066
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1031supercontigLSalAtl2s1031:17218..18371 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000219 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000219EMLSAG00000000219-682985Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000998EMLSAE00000000998-709926Lepeophtheirus salmonisexon
EMLSAE00000000999EMLSAE00000000999-709927Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769314auto769314Lepeophtheirus salmonispolypeptide
EMLSAP00000000219EMLSAP00000000219Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000219

>EMLSAP00000000219 ID=EMLSAP00000000219|Name=EMLSAP00000000219|organism=Lepeophtheirus salmonis|type=polypeptide|length=321bp
MPQPSPTKEVSLIVKGSIKFGFDLFNKVLNPEENTIFSSYSVASVLSMAS
MGAQGNTLKELKEVLNLTDDDQVLKTAYSIISSITKSDENIKLEIANGIF
LSTQVDINKKLFNDSRKYFLSEVETTNFKDTDAAIYKLNKWISDKTHDKI
KDLFAEGSVDPSTISVLINAIYFKGNWLEKFNSTLTSDKPFHVSPNQTVE
VPTMFKDKEFASEYVEIESTHDIKAGLELQGVSDIFSPKCDLSGVAGAPG
DIYVSKVIQKAMIEVNEERSEAAAATAILTNQCCALTILDPVVVDHQFTF
MIRDNSTGLILFSGRVVNPLF
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mRNA from alignment at LSalAtl2s1031:17218..18371+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000219-696066 ID=EMLSAT00000000219-696066|Name=EMLSAT00000000219|organism=Lepeophtheirus salmonis|type=mRNA|length=1154bp|location=Sequence derived from alignment at LSalAtl2s1031:17218..18371+ (Lepeophtheirus salmonis)
ATGCCTCAACCAAGTCCCACAAAAGAAGTTAGCCTCATCGTTAAAGGATC
CATCAAGTTTGGATTCGACTTATTCAACAAAGTGCTTAATCCTGAAGAAA
ATACAATTTTTTCGAGCTATAGTGTTGCAAGTGTTTTGTCCATGGCGAGT
ATGGGAGCCCAAGGGAACACTCTGAAGGAGTTGAAAGAAGTCCTAAATTT
AACAGATGATGATCAAGTCTTAAAAACTGCTTATTCAATCATATCTTCAA
TTACCAAGTCTGATGAGAACATCAAGCTCGAAATTGCTAATGGCATATTC
CTTTCAACTCAAGTGGACATTAATAAGAAATTATTTAATGACTCCAGGAA
GTACTTTTTGTCAGAGGTTGAAACCACAAACTTTAAGGACACGGATGCAG
CTATATACAAATTGAACAAATGGATATCAGACAAAACACATGACAAAATC
AAGGACTTATTTGCTGAAGGCTCAGTTGATCCATCTACTATAAGTGTTTT
AATTAATGCTATATATTTCAAAGGAAACTGGTTGGAAAAGTTTAATTCAA
CTCTCACGTCAGACAAACCATTCCATGTATCTCCGAATCAAACTGTAGAA
GTTCCGACAATGTTTAAAGACAAAGAATTTGCATCTGAATATGTCGAGGT
TTTAAAATGCATATATGTGCTCTACCATATTAAGGAGAACGAATGACGAT
GTATATCCTTCTCCCCAAAGAACGATTCGGACTTACAGAAGTCGAGGCAA
AGTTATCCTCAGAGTTATTTGATCCCTCCATACTTGATAAAATTACACGC
AAGAAAAATAAGCCTATATGTTTTCCCAAATTCAAGATTGAATCTACTCA
TGATATTAAGGCAGGTCTTGAGTTACAAGGAGTAAGCGACATATTTAGCC
CGAAATGTGATTTATCAGGAGTAGCAGGTGCTCCAGGAGATATATATGTG
TCTAAAGTGATTCAAAAAGCAATGATTGAAGTCAATGAAGAAAGAAGCGA
GGCTGCTGCAGCTACTGCTATCCTAACAAATCAGTGTTGTGCTTTGACAA
TACTGGATCCAGTTGTTGTGGATCACCAATTTACATTCATGATCAGGGAT
AATTCAACTGGACTCATTTTATTTTCTGGAAGAGTCGTGAATCCATTATT
TTAA
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