EMLSAT00000000220, EMLSAT00000000220-696067 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000220
Unique NameEMLSAT00000000220-696067
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1031supercontigLSalAtl2s1031:173363..175323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000220 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000220EMLSAG00000000220-682986Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001000EMLSAE00000001000-709928Lepeophtheirus salmonisexon
EMLSAE00000001001EMLSAE00000001001-709929Lepeophtheirus salmonisexon
EMLSAE00000001002EMLSAE00000001002-709930Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773870auto773870Lepeophtheirus salmonispolypeptide
EMLSAP00000000220EMLSAP00000000220Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000220

>EMLSAP00000000220 ID=EMLSAP00000000220|Name=EMLSAP00000000220|organism=Lepeophtheirus salmonis|type=polypeptide|length=598bp
MTNNWKIFLVISFLSIAQIALSFPSPDYGNLPILTTAAPLLVAEEQDNPE
APVANEQEEDEGRCTLVRSSKPTGPLCFNEPICEESCEKATKKLCNPVDE
QECVPRNETSCNTVYEEKCTDEFKTGTEQECRVFSEEQCKTLFTKQCDRV
NEEQCQVVYDTVNENVCETQNTQKCETVNEQDCQTVYENQCSTVYDTETQ
ENCQNVEDKECRMVSKTIEETVYETKYESQCKSAYENQCKTVYDTKIEKV
PDQECSTVQEKKCRKVWESTYDKKCATTYDRKCTQKLETSYKIVQDKKCA
NVIENKCQXIHEKRCKIVPETICSNPGESNTGYNVLDTTYGVPSGPICKK
VSRERCWNEPRTKCTKVPRTKCSFVPRKVAIKVPRQICKQEPKISCQKVA
RKIPREVCENHPVSKCKQILKDVSRKVPTKKCQKVPKKQCQNIPKQVPRI
IPKQVSKKECRPITKRICNPTTRQIPKQSCKNVPRESCSTVPRQSCSQVP
ETKCSTLPKQVPRKECRNVPRQECKEVPSQSCQNVPRQECKEVPRKVSQK
SCKQVPQEVCIDVPQEDCHTVTRNQCTEMIFDKCENNCQDGFWCKVCA
back to top

mRNA from alignment at LSalAtl2s1031:173363..175323-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000220-696067 ID=EMLSAT00000000220-696067|Name=EMLSAT00000000220|organism=Lepeophtheirus salmonis|type=mRNA|length=1961bp|location=Sequence derived from alignment at LSalAtl2s1031:173363..175323- (Lepeophtheirus salmonis)
TTCTCCTCAACTTCCCAACAGAGACAGCAATCAAGCATGACAAATAATTG GAAGGTAAGTTAAAATCCTCCGTCTTTTAAAACCGGAGCTTAACCCTTCA ATGTCTTTTTATGTAGATATTTCTCGTCATTTCATTCCTCTCAATTGCTC AAATCGCTCTATCCTTCCCATCTCCTGACTATGGGAACCTTCCAATATTG ACAACAGCAGCCCCATTACTTGTAGCAGAAGAGCAGGATAACCCAGAAGC TCCAGTGGCAAATGAACAAGAAGAAGATGAAGGGAGATGCACTTTGGTCA GATCAAGTAAGCCCACAGGACCACTTTGCTTCAATGAGCCCATTTGTGAG GAGTCATGTGAAAAAGCTACAAAGAAGCTGTGTAACCCTGTCGACGAGCA AGAATGTGTACCACGGAACGAAACGTCATGTAATACTGTGTACGAGGAAA AATGTACAGATGAATTTAAAACAGGCACAGAGCAAGAGTGCAGAGTCTTT TCAGAAGAGCAATGTAAAACTCTCTTCACCAAACAGTGTGATAGAGTCAA TGAGGAACAGTGTCAAGTTGTATATGATACGGTGAGTCTTTGGATTTGTT AACGGTTGTATCATGAATAATTAATTAATGTATCACTAATTGGTTAGGTC AATGAAAATGTATGCGAAACTCAAAACACCCAAAAATGTGAGACAGTAAA TGAGCAAGACTGTCAAACAGTTTATGAAAATCAATGTTCCACTGTTTACG ATACAGAAACTCAGGAGAATTGTCAAAATGTGGAGGATAAAGAATGTCGA ATGGTTTCAAAAACCATCGAAGAAACAGTCTATGAAACCAAATATGAATC CCAATGTAAATCCGCCTATGAAAATCAATGCAAAACGGTCTATGACACCA AGATAGAAAAAGTTCCAGATCAGGAATGTTCCACGGTTCAAGAGAAAAAA TGCCGTAAGGTTTGGGAGAGTACCTATGATAAAAAGTGTGCCACAACCTA TGATAGAAAATGCACTCAAAAGCTGGAAACATCCTACAAGATTGTTCAAG ACAAAAAATGCGCAAATGTCATTGAGAATAAGTGTCAGAYTATCCACGAA AAAAGATGTAAAATCGTCCCTGAAACAATTTGCTCCAACCCTGGTGAAAG TAATACTGGATATAATGTTTTGGACACAACTTATGGAGTCCCTTCTGGTC CTATTTGCAAGAAAGTTTCCAGAGAAAGGTGCTGGAATGAGCCAAGAACT AAATGCACCAAAGTACCGAGAACTAAATGCTCCTTTGTTCCACGCAAGGT TGCCATCAAGGTTCCTCGACAAATCTGCAAGCAAGAACCAAAAATTTCCT GCCAAAAGGTGGCTCGCAAAATCCCAAGGGAAGTTTGTGAGAACCATCCT GTTTCCAAATGCAAGCAGATTTTGAAAGATGTTTCAAGAAAAGTACCCAC CAAAAAGTGTCAAAAAGTCCCAAAAAAGCAATGTCAAAACATTCCAAAGC AAGTTCCTCGGATCATCCCTAAACAAGTCTCTAAAAAGGAATGCCGTCCC ATCACCAAAAGGATCTGCAATCCCACAACTCGTCAAATCCCTAAGCAATC TTGTAAAAATGTTCCCCGCGAGTCCTGCTCCACCGTTCCTCGTCAATCCT GCTCACAAGTCCCAGAAACAAAGTGCAGTACTCTTCCCAAACAAGTTCCA CGCAAAGAATGCCGAAATGTTCCTCGTCAAGAATGTAAGGAAGTCCCATC TCAGTCCTGTCAAAATGTTCCTCGTCAGGAATGCAAGGAAGTTCCTAGAA AAGTGTCTCAAAAGTCATGTAAACAAGTACCTCAAGAAGTCTGCATTGAT GTTCCCCAGGAAGACTGTCATACTGTAACTCGGAATCAATGCACGGAAAT GATCTTTGATAAATGCGAAAACAACTGTCAAGATGGTTTCTGGTGCAAGG TCTGCGCCTAA
back to top
Add to Basket