EMLSAT00000000228, EMLSAT00000000228-696075 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000228
Unique NameEMLSAT00000000228-696075
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1031supercontigLSalAtl2s1031:41434..42659 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000228 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000228EMLSAG00000000228-682994Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001027EMLSAE00000001027-709955Lepeophtheirus salmonisexon
EMLSAE00000001028EMLSAE00000001028-709956Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770341auto770341Lepeophtheirus salmonispolypeptide
EMLSAP00000000228EMLSAP00000000228Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000228

>EMLSAP00000000228 ID=EMLSAP00000000228|Name=EMLSAP00000000228|organism=Lepeophtheirus salmonis|type=polypeptide|length=368bp
MSSSNSRGRDEKRYFNNPFPNWNESAEASSFLESNTISESNGYLRLKLDS
ALAXKIREAQDQLTSIIDNAYFIKRERDFMDYSVYTGLSGILYLFKALNR
TVDEDHVLECLESKSIKKRLGFLGGIVGPLAFASAYGNQKEKYLKVLLKL
KDSTLFHEAPEEFLYGKAGYLFALLLVKKENPHFVQIDEVIKLIISVLFK
KGLSKSTSSLQYEWHEKEYLGGAHGYAGILSTLLRAKAFMSSSHLSTIRS
KIDDLRKLQFESDEKYLKVAEKCLNVIWERGLLKKGFGLCHGSSGNGYSF
LLAYKNTQDPKYMYMALRFAEWCMDFRNPKCSTPDRPYSLFEGLAGNLFF
LYHVQQSVPDTYFPCYTI
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mRNA from alignment at LSalAtl2s1031:41434..42659-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000228-696075 ID=EMLSAT00000000228-696075|Name=EMLSAT00000000228|organism=Lepeophtheirus salmonis|type=mRNA|length=1226bp|location=Sequence derived from alignment at LSalAtl2s1031:41434..42659- (Lepeophtheirus salmonis)
ATGTCATCATCCAACAGCAGGGGAAGAGATGAGAAACGATATTTTAACAA
TCCTTTTCCAAACTGGAACGAATCGGCCGAAGCTAGCTCATTTCTTGAGT
CGAATACAATCTCGGAATCCAATGGCTACCTTCGACTGAAATTAGATTCT
GCTCTTGCCMTCAAAATCAGAGAAGCTCAGGACCAATTAACGTCTATAAT
TGATAACGCGTATTTTATCAAGCGAGAAAGGGATTTTATGGATTACTCCG
TGTATACTGGTCTATCAGGGATATTGTATTTATTTAAGGCTTTGAATAGA
ACTGTGGATGAGGATCACGTCTTGGAATGCCTTGAGTCAAAAAGTATAAA
GAAAAGATTGGGTTTCCTGGGTGGGATTGTTGGGCCACTAGCCTTTGCAT
CTGCTTATGGTAATCAAAAAGAGAAGTACTTGAAAGTTCTGTTGAAATTA
AAGGATTCGACGCTTTTCCATGAGGCTCCGGAGGAGTTTCTATACGGAAA
GGCGGGCTATCTATTTGCTCTCCTTCTGGTTAAAAAAGAAAATCCACACT
TTGTACAGATTGACGAAGTTATTAAATTAATTATCTCAGTCCTTTTTAAA
AAAGGACTTTCCAAATCAACCAGCTCACTCCAATACGAATGGCATGAAAA
AGAGTATTTGGGAGGAGCTCATGGCTACGCTGGGATTTTATCCACGCTTT
TGCGTGCAAAGGCCTTCATGAGTTCTTCTCATTTGAGCACTATCCGCTCA
AAAATAGACGACTTAAGGAAACTCCAATTCGAAAGTGGTAATTTCCCTTC
ATCTACATCCAGCTCTAATNNNNNNNNGGTGATAAACTTGTTCATTGGTG
TCATGGTGCTCCAAGTTTCTCTGATTTATATCTTTTGGCATTTGAAACTT
TTAAAGATGAAAAATACTTGAAGGTGGCAGAAAAGTGTTTGAATGTTATT
TGGGAGAGGGGACTCCTCAAAAAAGGATTTGGACTCTGTCATGGAAGCTC
TGGGAATGGTTATTCTTTTTTATTAGCATATAAAAATACTCAAGATCCCA
AATATATGTATATGGCACTTCGATTCGCAGAGTGGTGTATGGACTTTAGG
AATCCTAAATGCTCAACACCAGATAGACCCTATTCGTTGTTTGAAGGTTT
GGCAGGGAATTTATTTTTTCTCTATCATGTTCAACAATCTGTTCCAGATA
CGTATTTCCCGTGCTATACAATATAG
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