EMLSAT00000000235, EMLSAT00000000235-696082 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000235
Unique NameEMLSAT00000000235-696082
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1031supercontigLSalAtl2s1031:86691..89489 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000235 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000235EMLSAG00000000235-683001Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001054EMLSAE00000001054-709982Lepeophtheirus salmonisexon
EMLSAE00000001055EMLSAE00000001055-709983Lepeophtheirus salmonisexon
EMLSAE00000001056EMLSAE00000001056-709984Lepeophtheirus salmonisexon
EMLSAE00000001057EMLSAE00000001057-709985Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771788auto771788Lepeophtheirus salmonispolypeptide
EMLSAP00000000235EMLSAP00000000235Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000235

>EMLSAP00000000235 ID=EMLSAP00000000235|Name=EMLSAP00000000235|organism=Lepeophtheirus salmonis|type=polypeptide|length=773bp
MSSSSENSSTSNPATGSAESNNKSKQTNLQRIQQRKAALRRWPMAKKTEK
LAIYSSCKADASCKCSGWKNPHPAPNPPRPDASLPSASLEDPCRSCGHSL
SRHVAHLKSVSSEEVDRLLGIVVDVENLFMCVHKEEDQDTKQVYFYLFKF
LRKCILELSKPCIQGGPLGNPPFEKPSIAKGVTNFVLFKFSHLSQRDWQT
MYDLAKMFLHCLNHWKLETPTARKQIISSSEDISVYKVNYTRWLCYCHVP
AFCDSLPHYDTTLIFGRTLLKSVFKTMRKQLLSKFRLEKDKMPPEKRTLV
LTHFPRFLSLLEEEVYGADSPIWDPEFKQAPPPHVQQAMSGSIASPSNNK
VGEASDSNKKRAVTDIDKSFENAAKRRREQPDIDESLDQVITEIVAVLDD
SSKMLGPXAILPEHAPXDXAAKVEEKRGDIEFHCVANSLTEKVPKQTMLW
LIALQNVFSHQLPRMPKEYITRLVFDPKHKTLALVKDGRPIGGICFRMFP
SQGFSEIVFCAVTSNEQVKGYGTHLMNHLKDYHIRNGVFHFLTFADEFAI
GYFKKQGFSKDIKLGKPIYQGYIKDYEGATLMGCELNPKIIYTEFTAVVR
KQKEILKKLIERKQNQIRKVHPGLSCFRDGVREIPVESIPGIIEAGWXPT
EKTSRPTRNSELSDPEHTYNTFKTILTGVKNHQSAWPFLSPVDKKVVNDY
YDHVKYPMDLRTMTERLKSLYYCNKRLFIADFRRMFSNCRAYNAPDTEYY
NCANILEKYLNSKLKDHGLIDKA
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mRNA from alignment at LSalAtl2s1031:86691..89489+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000235-696082 ID=EMLSAT00000000235-696082|Name=EMLSAT00000000235|organism=Lepeophtheirus salmonis|type=mRNA|length=2799bp|location=Sequence derived from alignment at LSalAtl2s1031:86691..89489+ (Lepeophtheirus salmonis)
GTCATGTGAATTATGAAAGCATGACGTCACGGAGTGCTTCCTTCACTACT
GCTATTCCCTATTAGCTATTGGATCTCTCGGCCGAGTTGTGCTCTTTCAT
TATTCACAAGAAAATATCATCTAGCCCTCCTTCGATAGGGGCCATCCCCT
ATTAATATGATATATAGCCAGACTTAATGAAGCTTCTATCTCGACGTCCT
CTTTCTTCACCTTTGTTTTTGTTATTTCTTCTCCTGGAAGCTCTCTGAGT
CAATCCCTCTGGCAAGGACGCGAGCTGGGTTACGAAGCCCTTCGCTGAAA
TGTCTTCCTCCTCAGAGAACTCCTCTACGTCAAATCCGGCTACGGGTTCG
GCAGAGTCCAACAACAAGTCGAAGCAAACGAATCTTCAGCGTATTCAGCA
ACGGAAAGCGGCTCTGCGAAGATGGCCCATGGCGAAAAAGACTGAGAAGT
TAGCCATTTACTCGTCATGCAAAGCGGATGCCTCTTGTAAGTGCTCCGGG
TGGAAGAATCCGCACCCTGCTCCGAACCCTCCCCGCCCGGATGCTTCTCT
TCCCTCTGCATCGCTGGAGGATCCCTGCAGATCCTGCGGACATTCGCTCT
CACGACACGTTGCACACCTTAAAGTAGAGAGTCCCTTTTCTGTTGTTGAG
TCTCCAATATTCATTATGCTATCTTTTCCAGTCCGTTTCCTCGGAAGAAG
TGGACCGACTCCTTGGAATCGTGGTGGACGTGGAGAACCTCTTCATGTGC
GTACACAAAGAAGAGGACCAAGACACAAAGCAAGTCTACTTCTACCTCTT
TAAGTTCCTGAGGAAGTGTATACTGGAATTGAGTAAGCCCTGTATACAAG
GAGGTCCTCTGGGGAATCCTCCCTTCGAAAAGCCTAGCATTGCAAAGGGT
GTCACCAACTTTGTCCTCTTTAAATTTTCACATCTGAGTCAACGAGACTG
GCAAACCATGTATGATCTCGCTAAAATGTTTTTGCATTGTCTCAATCATT
GGAAACTCGAGACTCCTACAGCCAGGAAACAAATCATTTCATCTTCTGAG
GATATCTCTGTCTACAAAGTGAACTATACTAGATGGCTTTGCTACTGCCA
TGTGCCAGCATTCTGCGACTCTTTACCTCACTACGATACGACCCTTATCT
TTGGAAGAACTCTTCTTAAGTCTGTGTTTAAGACAATGCGGAAACAGTTG
CTGAGTAAATTCAGATTAGAAAAGGACAAAATGCCTCCTGAGAAAAGGAC
TCTGGTATTGACACATTTTCCACGGTTTCTCTCTCTTCTGGAAGAAGAAG
TATATGGCGCAGACTCCCCTATTTGGGATCCAGAGTTTAAACAGGCACCC
CCTCCACACGTTCAACAGGCCATGAGTGGATCTATTGCATCTCCATCTAA
TAATAAGGTTGGAGAGGCTTCTGACTCCAATAAAAAAAGGGCTGTCACGG
ATATAGATAAATCTTTTGAAAATGCCGCTAAGAGAAGACGCGAACAACCC
GATATTGACGAGTCCTTGGATCAAGTCATTACTGAGATTGTTGCCGTTCT
TGACGATTCCTCAAAAATGCTTGGMCCTMAAGCCATMCTTCCTGAACATG
CYCCANGAGACRAAGCCGCAAAAGTCGAAGAGAAGCGTGGTGATATCGAG
TTTCATTGTGTTGCCAATTCCCTCACAGAAAAGGTCCCTAAACAAACCAT
GCTATGGCTCATTGCGCTCCAAAATGTATTTAGTCATCAATTACCTAGGA
TGCCAAAAGAATACATCACTCGTCTCGTCTTTGATCCTAAACATAAGACT
CTTGCTCTTGTCAAAGATGGCCGCCCTATCGGAGGAATTTGTTTTAGAAT
GTTTCCTAGCCAAGGTTTCTCTGAAATTGTATTTTGTGCTGTGACATCCA
ATGAACAAGTGAAGGGTTACGGGACTCACCTTATGAATCATTTAAAGGAT
TATCATATCCGCAACGGAGTTTTCCATTTTCTTACCTTTGCAGATGAGTT
TGCTATTGGTTATTTTAAAAAACAGGGATTTTCAAAGGATATTAAACTGG
GCAAACCTATTTATCAGGGCTACATTAAAGATTATGAAGGAGCAACACTC
ATGGGTGAGGAATCAAAGTAGTTCTTTTCTCTTATTGAACGGATTATATT
ACCTATCATTTCTTTTACAGGCTGTGAATTGAATCCCAAAATCATTTACA
CGGAGTTCACTGCCGTAGTGAGAAAACAAAAGGAAATCCTCAAGAAACTC
ATTGAACGGAAACAAAATCAAATTCGTAAAGTTCATCCAGGTCTAAGCTG
TTTTAGAGACGGAGTTCGAGAGATTCCAGTGGAGAGTATTCCTGGGATCA
TTGAGGCTGGKTGGRTACCTACGGAAAAGACTTCCCGACCCACACGAAAC
TCTGAGCTGTCGGATCCAGAGCATACCTACAATACCTTTAAAACCATTCT
AACCGGCGTAAAGAATCATCAATCCGCCTGGCCCTTCCTTAGCCCCGTCG
ATAAAAAAGTGGTAGGACTGGTTATTCCCTTTTCCTGATAATATTTTTAT
TTCTTATTTTTGTAGGTGAATGACTACTATGATCATGTCAAATATCCCAT
GGATCTACGTACTATGACGGAGAGATTAAAATCCCTTTACTACTGTAATA
AGCGACTCTTCATTGCGGATTTTAGACGAATGTTTTCAAATTGCCGAGCC
TATAATGCCCCTGATACGGAGTATTACAACTGTGCTAACATTTTGGAAAA
ATATTTGAATTCCAAGCTCAAGGACCATGGCCTCATCGATAAAGCTTAA
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