EMLSAT00000000249, EMLSAT00000000249-696096 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000249
Unique NameEMLSAT00000000249-696096
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1036supercontigLSalAtl2s1036:82728..88820 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000249 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000249EMLSAG00000000249-683015Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001121EMLSAE00000001121-710049Lepeophtheirus salmonisexon
EMLSAE00000001122EMLSAE00000001122-710050Lepeophtheirus salmonisexon
EMLSAE00000001123EMLSAE00000001123-710051Lepeophtheirus salmonisexon
EMLSAE00000001124EMLSAE00000001124-710052Lepeophtheirus salmonisexon
EMLSAE00000001125EMLSAE00000001125-710053Lepeophtheirus salmonisexon
EMLSAE00000001126EMLSAE00000001126-710054Lepeophtheirus salmonisexon
EMLSAE00000001127EMLSAE00000001127-710055Lepeophtheirus salmonisexon
EMLSAE00000001128EMLSAE00000001128-710056Lepeophtheirus salmonisexon
EMLSAE00000001129EMLSAE00000001129-710057Lepeophtheirus salmonisexon
EMLSAE00000001130EMLSAE00000001130-710058Lepeophtheirus salmonisexon
EMLSAE00000001131EMLSAE00000001131-710059Lepeophtheirus salmonisexon
EMLSAE00000001132EMLSAE00000001132-710060Lepeophtheirus salmonisexon
EMLSAE00000001133EMLSAE00000001133-710061Lepeophtheirus salmonisexon
EMLSAE00000001134EMLSAE00000001134-710062Lepeophtheirus salmonisexon
EMLSAE00000001135EMLSAE00000001135-710063Lepeophtheirus salmonisexon
EMLSAE00000001136EMLSAE00000001136-710064Lepeophtheirus salmonisexon
EMLSAE00000001137EMLSAE00000001137-710065Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771681auto771681Lepeophtheirus salmonispolypeptide
EMLSAP00000000249EMLSAP00000000249Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000249

>EMLSAP00000000249 ID=EMLSAP00000000249|Name=EMLSAP00000000249|organism=Lepeophtheirus salmonis|type=polypeptide|length=437bp
MAXTAATSIMPAISQLKDKKNGSMEGWKAKLDIPPRDNRKRTSDVTATKG
NEFEDFCLKRETLMGIFEKGWEKPSPIQEASIPVALSGRDILARAKNGTG
KTGAYSIPILEQIDPSNDVIQGMIIVPTRELALQTSQICIELSKHRNVKV
MVTTGGTNLKEDIMRIYEKVHLVVATPGRILDLIEKGVAKVMNCKVICLD
EADKLLGHDFKGMLDRLIEHLPERRQILLXSATFPLTVEYFMKRHMKSPY
EVNLMDELTLKGITQYYAFVQERQKVHCLNTLFTKLQINQSIIFCNSTQR
VELLAKKITELGYSCYYIHAKMAQTHRNRVFHDFRAGLCRNLVCSDLFTR
GIDIQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFLL
HRIEGELGTEIKPIPKVIEPALYVAEAHLEEPEEQQQ
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mRNA from alignment at LSalAtl2s1036:82728..88820+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000249-696096 ID=EMLSAT00000000249-696096|Name=EMLSAT00000000249|organism=Lepeophtheirus salmonis|type=mRNA|length=6093bp|location=Sequence derived from alignment at LSalAtl2s1036:82728..88820+ (Lepeophtheirus salmonis)
CCGGCCATGCATTGTCCCTTCTGTACCTCCTCGTCTACTACTACGCACTG
TTTCTCTTCTCTTTCTTCTCTGCACTTTTTTCCTTTTCTTTGGATTTCTT
TATTTCTTCCTTCTAGTCTGATTCCCCGTGTTCTTTTTCAGTTAAACGAC
GCCAACGGAAACGAGTCCTACTAGAAGTTTGGAAGAAAGGACTTCTCCTT
CGTGTATCATTTGGACTTTCTGCTCAGCACATTGATTGGATTGATTTAGT
AATTATTTGGACGGTGCGATAATTGTCTTCGAGGTGAGTTTAAGAGTACT
GCTACGAGATGAGTCTAGTTATGGAGCGGTAGGGGGAGTGTGGGAATCTG
AAAATATCCGTGGGATCTTTGCTGTAGCCCAGTGTAGGGTACGGCCTGGG
NTACTCTATGCGAGTTGTTTGGGGTGTGGAGTGAGTGACGCCTTGTTGAT
AGTTGATGTACTTGTCTTGCAGAGCCATAGAAGGAGAGTGCATTAAGCGC
AATAGTGAGATAGAGAAATCCGTACGTGGTTGTGATTGATATGGCTGSCA
CCGCAGCGACAAGTATAATGCCGGCCATTTCTCAGCTGAAAGACAAGTAA
GTGCAATGAATAGCCCCTTATTGATGCTGACTTAGCGCCGTCCTTAGGAA
GAACGGGAGCATGGAAGGGTGGAAAGCCAAACTGGATATTCCCCCTCGGG
ACAACAGGAAGAGAACGAGCGACGTGACAGCCACCAAAGGCAATGAGTTT
GAAGACTTTTGTCTGAAGCGAGAAACGCTAATGGGGATATTCGAGAAAGG
TTGGGAAAAGCCGAGCCCCATTCAAGAGGCCAGCATCCCCGTGGCACTGA
GTGGCAGAGACATATTGGCCAGGGCAAAAAACGGGACTGGAAAGACTGGC
GCCTATTCGATCCCCATTTTAGAGCAGATCGACCCAAGCAACGATGTGAT
TCAAGGTAAAAGAGCCCGAGTAGCCCCTGTGCGTAATAGTAGGTAAAGAA
GTGCTCCTTTTTAGGAATGATAATCGTGCCCACGAGAGAGTTAGCCCTGC
AGACGAGTCAGATTTGTATCGAATTAAGTAAGCATAGGAACGTTAAGGTC
ATGGTCACGACTGGTGGAACGAATTTAAAGGAAGACATAATGCGGATTTA
CGAAAAAGTGCATCTGGTTGTTGCCACTCCTGGTCGTATTCTGGATCTGA
TCGAGAAAGGAGTCGCCAAAGTAATGAATTGTAAAGTAATATGCCTTGAT
GAAGCTGATAAATTATTAGGCCACGATTTCAAAGGTATGCTCGATAGACT
TATCGAGCATTTACCTGAGCGAAGACAGATTCTGCTTTKCTCCGCCACAT
TTCCTCTGACTGTAGAATATTTTATGGTGAGTTTACTGCAAGTTTTAAGG
AGGTGTAGCTGGTAATGAAATCTTTTCAGAAAAGACATATGAAGTCTCCC
TACGAAGTTAATTTGATGGATGAACTGACACTAAAAGGAATCACTCAGTA
CTATGCCTTCGTTCAAGAGAGGCAAAAGGTTCATTGTTTGAATACACTGT
TTACAAAATTACAGGTAATTGTCTTTTTCACTTGCATTTCACTGTATCTA
GTTATCCCAACTTATTTCCAATTTTAGATAAATCAAAGTATTATATTTTG
CAACTCAACGCAACGTGTAGAACTATTGGCTAAGAAAATTACGGAGTTGG
GCTATTCATGCTATTATATTCACGCCAAAATGGCGCAGACGCACCGGAAC
AGAGTCTTTCATGACTTCAGAGCTGGTTTATGTCGTAATTTAGTTTGCTC
CGGTAAGATTTAATCAAAGAAGTTTTTTAAATATTTTCGTTGCAATTTTT
TCTTTCTTAGATTTATTTACCAGAGGAATTGATATACAAGCTGTGAACGT
AGTCATTAATTTTGACTTTCCCAAAATGGCAGAAACTTATCTTCACAGGA
TTGGTAGATCTGGTCGTTTTGGTCACTTGGGTATTGCCATTAATCTTATT
ACTTACGATGACAGGTTCCTTCTTCATCGCATAGAAGGTGAACTTGGAAC
AGAAATAAAACCTATACCAAAGGTATGTAAATTTTTTACGGTTTTTTCTC
CCTTTAAGTATCTATAGGATGACTTTTTTAAAACTTGAAAATTCCCTTGA
TTGCTATAACGATTAGTCTTACTGATAATCTTATCATTAATTTATATATA
TTATTGTGAGAGTTTGTGGACTTATTTGGATCTATTTGTTAGGTAATCGA
ACCTGCACTCTATGTGGCAGAAGCTCATTTGGAAGAACCTGAAGAGCAAC
AACAATAAATAATTCATCTTAGATGTATATCAAGTCTTCGCATCTACTGA
CAGATTGAAAACTTCATGTATATATTTCCTCAAATTATCAATTATGTATT
AGATTATATCCGAGTCCATTATTATATATATATATTTATATCTGGTCGCC
AAAAAAAAGTTCAAAATAGTTCCATGTTAATGGATATTTTTTCACCTAGA
ACTGCGACCCTCTGAACATAATTTACTATTATCTAATGATTGAAAATCCT
ACACTTTCATACTTTAGGATTTCATTGTTTCTTTCTTTGCATAGTACCTG
TTGTTTAGTACTGCATTTTTGATGAAAAAGTCAATTCTTTGTCTTGCGTA
AGTAGCAGGCATATTGAATAATAGTCGTACGTATATATATTTTTATTATA
TTTTCGTTACATCACGAATACTTCTGAGATCATATGATTAAAATGGCTTG
CTGTCTGATCCTATATAACTTTCATGCTCGAGAMCGGTCCTTGGAGCTAA
TCAGCCATCGAATTGCCATCACAAATCATAAAATAAGTTAACTCTGAAAT
CTAGATCTTCTCTGATTCGCTACAAGGACTGTTGTTTCAAATTATCTCTC
GCTTGAATAGAGGGTCAGCTATGCTTGAATCATATCAGAAAAACTTNATG
CGGTCTTGAATATTTCATATTCATAAAAAATAATTACCATTTCTAAATTC
ATCTTTTTTTTTCTCTCTCTCTAAGATCAAAAACTGTAAATGTATTGTTA
ATTGATCATATAAATTGTAAGATGTATTTTTTTTTACCATGTTCGAATTC
CATTTATTCGGAATATCTACCTGAGTACTTCCTACGTCTTAAAGACCTGG
AATTAAAGGGTAGGCTTTATCTAATGAAAATTGAAGATCTAGTAATTTTG
CTGGGGTTTTGTGAGGATTAGGGATCAGTTCAAAATTCAAAATTAAATGT
TATTGATCCATTTTGTATTATTGAAATTAATTGATAGTCAGAATTGGATT
TTTTTTCGACACAGTTTGGCACTCATTTTATCAAATAAAAACAAAAATCT
AAAAAAAATTAAATTTAAAGGATTATTGGTAGGCTTATTTCAATTTTTCG
CATTTGTGTAAAATTGTATTGTATTAACTGTTAACATCCTTTGTAAGCCG
ATGAAACATCAATAAAAAATCCAATAAATAACCCCATTTATCTAATTTAT
TTGAATGATGAAATCTGTCTATTTGGAAGTACGAGACGAATTATTTGTAT
AAGTTCTGTATGGATGAACTCTGGACATAAATAGAAGGTAAATAAATAAA
TATTTAATGAATCATTTTGTTAGTCCCTATCATTGTGTGATGATAAAAAC
ATTTATATACCCAGCTCGATGAGTATAAACAATGATTACTTAATTTATCC
TGATTTTTCCTTTGTTAAAAATTGCAAGATTTTTGACGCTGTTTAATCTC
ACACCTAACTACTATGCATCTTTTCCAGGTCATTTTGCAAGTTGGAATAT
TAAAAGTACAACCCAAATAATCCAAAATTTCTCGATCTGGAAACTGGATA
AAGACAATGTAAGTACCTTTATATTTAATGAATGCATTTGTTTGTTCCAA
TTATTGTGTGATGATAAAACNAGGTCATTTTGCAAGTTGGAATATTAAAA
GTACAACCCAAATAATCCATGATTTCTTGATTTGGAAACTCTTGATAAAG
ACAATGTAAGTACCTTTATATTTAATGAATGCATTTGTTTGTTCCAATTA
TTGTGTGATGATAAAACGTTTCTATACCCAGCTCGATGAGTAAAAACAAT
GATTATTTAATTTATCCTGATTTTTTCTTTGCAATTAATTTTACGATTGT
TGATACTTTTAAATCTCTGACTTCACCTGTTTTTTATTTTTCTTTTTTTC
AGGCAAGGATTCATTTTGCTAATAAAATTAGTTGTTAGTAGCGCTTAAAG
CCTTTTTCGATAGCTTAAATCTATGTATGGATTGATGTTTTTCTATTTTG
TGTAAGTTTCCGTCTTTTTTTTCAATTTTTTTTTCATGATGAAAATATTT
ATTTAATTCTAAACCTAGCTCTTTGATGCTCATATGATATTAATTAAAAT
CTGATAAAAATTTACAAGTCTTTATACAATATATCTCTAATCAATGAGTT
GCGGTCATTTATGTTTTAATTTGTTTGTATAATAGGTGTTACTTTTTTGG
TATTCGTTCTATATCTCCTAAAATCATAATATGAGGTAAGTTAAATTAAT
CAGGTAGTAATGCCCTGATAAACTTAGAAGGACTTAACCCTTTTATGTAT
AACAACTGAAAAAAATGCCCCACTTGAGTACATAGTACAATTTTTACTAT
TTCATATTACAAGAGTCTTATTGTCTAGCAGGTCACTTCAATTGCGTCTT
CTGTCTCTGGGAGGGAACATTTTTTGAGGTGAGATTGTTTATCTAGTCTA
ATTTCAGTTTTTATGATGATACACAATAACATTCTAAACCTAGCTCTCTT
TGAATCTCATAAATAATGATATGATTTCATTTTCTGATCAAACMAATTTG
GAGCAAATAATTTTTTTACGATTTTCTGGCCTGTTTTTTTAAAAATAAAT
ATGTTTAATTCGTAGGTCTTCTGTAGCCTTAGTAGTTCTGGTCATTTTGG
TCTCTTGAATATCGTCATTTATCTTTTTACTTAAGATGACGGGTTCCTTC
TTCATGGCGGAGAAGTTGAATTTGGAACATAAAACCGGTGGTACAAAGTG
TATGTATTAGTTTTTTTTTTTTTAAAGTATCTTTAGGATGACATTTTTTT
TTAAACTTGAAAATTTCTTGATTGTTTTAACGATTAGTCTTACTGACGAT
ACTATCATTAATTGATTGTAAATTATTGTGCGTATTAGTGGACTTATTTG
AATCTATTCTTAGGTAATCTAGCCNTTTACTCTATATGGCAGATTCTCAT
TGAAAGGAATCTGSGKAAYAACWTCAATTGGAGTGAAGGTGAGTTTAAAA
TAAAATAAAATAAAATATTATTATTTCTATGATGATAAAACTAAAACATT
CTAAACCTAGCTCAGTTTGAATCTAATAAATTATGATATAACTTAATTTT
CTGATAAATTAACTTTGAAACATACAATTTTAACGAATTATTTGGTCTGT
TTGTATTGAATTTACTTTTTATTTGTAGGTGTTTGCTACTATTGTGTTGC
CCGAGGCCGTGATATTTACTTGATTTGTAACATGATCATTTAATTCTGTA
TTTTGGATGAGTGAGGGTAAGTTTGTTTGTTAAGTTTATTTTAAGTTCTT
ATGATGATAAAACTTTAAACATTCTAAACCTAGCTCATTTTGAATCATTA
AAATTGTGATATTACTTAAATTTTCTGATAAATTAACTAGGTATTAAGAC
ATTTTATGAATTTTATATATAGCTGATTTAAAAAAAAAACCTCTTTAACT
TACAGGTGTCCGCTAGGATTTGGAATTGGATTTTGTATTTATTTGTGGGT
AACTTTCGTGAAAAATGGTAAGATCGTTTAATTTTTCAATAATAGTTCTT
CATTTGGAAAGTGTTCGTCTGCTTCTTTTTACTGACTTCATTATGTGGTT
ATATTTTTACCTAATTCGTGTACCATTAAATGAGTGGTAATGGTGCTAGG
AAGTGACCGCAAAGGATTCCAATTTATTTTATCAAGGTGTTAATTGAAGA
TGAGAGGAAATACTTTTTATTTAATGTATTCGAGGACCTTGCGTAATTTC
GGACCTTTATCTTTCATTAATTTGAAATAAATTATGATATTTT
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