EMLSAT00000000252, EMLSAT00000000252-696099 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000252
Unique NameEMLSAT00000000252-696099
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1037supercontigLSalAtl2s1037:19267..21863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000252 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000252EMLSAG00000000252-683018Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001156EMLSAE00000001156-710084Lepeophtheirus salmonisexon
EMLSAE00000001157EMLSAE00000001157-710085Lepeophtheirus salmonisexon
EMLSAE00000001158EMLSAE00000001158-710086Lepeophtheirus salmonisexon
EMLSAE00000001159EMLSAE00000001159-710087Lepeophtheirus salmonisexon
EMLSAE00000001160EMLSAE00000001160-710088Lepeophtheirus salmonisexon
EMLSAE00000001161EMLSAE00000001161-710089Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769416auto769416Lepeophtheirus salmonispolypeptide
EMLSAP00000000252EMLSAP00000000252Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000252

>EMLSAP00000000252 ID=EMLSAP00000000252|Name=EMLSAP00000000252|organism=Lepeophtheirus salmonis|type=polypeptide|length=513bp
KICYLKKXTEPKSTEDDSDSNDDDDIDQYADTTRSVDLVEKETYEPRLKY
YLKKDLKNTRYTTSISDDGTSVLYSFQIKSTNVESILIELTRRGFGTDKD
TAVSVVQEHISLGSILSMAPSRNTLGKESEDNDESLKEDGFYLSVKSXLM
VAEVISRXXAGGNFTFDYCMLVILAGMIAFMGLIDNNSVTLVASMLVSIG
LFFGILVSLMILFDIYGLIDVSQWPSDEMLSRGRTKGLITGIFVAIPSGA
GIALSVLGGNAGSLVGVAISASLLPPAVNAGVFWAFSFLAAIYQGNDTNL
IRGYDGITSRPGLGCLQPTDIGISPSEARNDFLLLYHCDLAVEALICGFV
SLTLTILNIICIIFTGXAILRIKEVTPDKIPQTFSNFWKRDVKAHRNYYR
TLKTPLDNKKRRRELSIFEGDNAHNLDGSFLQNIYARAQNDEDYLDITRW
VAMPQPPPVSNEPKIDIHAKRFEEIMEQAVADEIRRSSTDYENGFSLAQI
SSQEEKKEGYHND
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mRNA from alignment at LSalAtl2s1037:19267..21863+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000252-696099 ID=EMLSAT00000000252-696099|Name=EMLSAT00000000252|organism=Lepeophtheirus salmonis|type=mRNA|length=2597bp|location=Sequence derived from alignment at LSalAtl2s1037:19267..21863+ (Lepeophtheirus salmonis)
AAGATATGTTATTTAAAAAAGAGNACTGAACCAAAAAGTACGGAGGATGA
TAGCGACTCTAACGATGACGATGATATAGATCAATACGCAGATACTACTC
GATCAGTGGACTTAGTGGAGAAGGAAACTTACGAGCCTCGGCTTAAATAT
TATTTAAAAAAAGATTTGAAAAATACTAGGTATACCACTAGTATTTCGGA
CGATGGAACCTCAGTGCTCTACTCATTTCAAATTAAATCTACCAATGTCG
AATCAATCCTCATTGAACTTACTCGCAGAGGATTCGGAACGGATAAAGAC
ACAGCTGTGTCTGTTGTTCAAGAGCATATTAGTCTTGGATCCATTTTATC
TATGGCTCCAAGTCGGAATACTCTTGGGAAAGAAAGTGAAGATAACGATG
AATCTTTGAAAGAGGATGGATTTTATTTGAGTGTTAAATCTAGMCTCATG
GTTGCTGAAGTTATATCTAGAATRSGAGCCGGTGGTAATTTTACATTTGA
TTACTGTATGCTGGTTATTTTAGCAGGGATGATAGCATTTATGGGTTTGA
TTGACAACAATTCTGTAACTTTAGTAGCATCAATGCTCGTTTCNATCGGT
TAGTTTAATATTTTATACTCTCATAAAAAATGGCATGATTCAATTTCAGG
TTTGTTTTTTGGAATATTGGTGTCCCTCATGATATTATTTGATATATACG
GTTTAATTGACGTAAGCCAGTGGCCTAGTGATGAGATGCTCTCAAGGGGT
AGAACCAAGGGTCTTATAACTGGTATATTTGTAGCAATACCATCAGGAGC
TGGAATTGCGTTATCAGTATTGGGTGGAAATGCAGGATCCCTTGTTGGTG
TTGCCATCTCTGCTTCTTTACTTCCTCCTGCTGTAAACGCTGGAGTATTT
TGGGCTTTTTCATTTCTTGCCGCAATTTATCAAGGGTACATAATTTGGCA
TGATCTATTCATTGATACTTATAACAAAAAATATATCTATTTCTAATTAA
GGAATGATACTAACCTCATCAGAGGATATGATGGAATTACATCACGTCCT
GGACTTGGGTGCCTTCAACCTACAGATATAGGAATATCTCCATCCGAGGC
TCGTAACGATTTTTTGCTACTTTATCACTGTGATTTGGCTGTAGAAGCCC
TTATTTGTGGATTTGTTAGCTTAACTTTAACAATTTTGAATATAATTTGT
ATTATTTTTACTGGCTAKGCAATCCTACGTATAAAAGAAGTAACTCCAGA
TAAAATACCCCAAACTTTTTCAAACTTCTGGAAGCGAGATGTCAAAGCTC
ATCGAAATTACTATAGAACCCTTAAGACACCTCTTGATAATAAAAAAAGG
CGTAGAGAATTAAGTAAGTTCATTCAAGAGTCACATTCGGTTTATATTCA
GAGTAACATACCTACATTGTTTCGTGTTTTTTTTTTTAAACATAGGTATA
TTTGAAGGAGATAATGCTCATAACTTGGATGGCTCATTTTTACAAAACAT
ATATGCTCGTGCACAAAATGATGAGGATTATCTGGATATAACACGATGGG
TAGCCATGCCACAACCTCCTCCAGTCAGCAATGAACCAAAAATTGATATA
CATGCTAAGAGATTTGAAGAAATAATGGAACAAGCAGTTGCGGATGAGAT
TCGAAGATCAAGCACGGATTATGAAAATGGATTTAGTTTGGCTCAAATAA
GTAGTCAAGAAGAGAAAAAAGAAGGATATCACAATGACTAAGGAAACATA
TAAATTTTATAATTAATCACTTAACAACGCATTTTTAATTATAGTATGTA
AATCATTCATTATTATTGAGTGTGCAGTATTGTATTGAAGTTCTATGATG
TGGCAGATTCGGGGCCTTCACCTCCAGGTACAAGCTGAAATATAAATAAA
AAAGTTATCATAATTATTTTTTTCCTTAACAAAGTGTAGAATTGAGAAAT
AAAACNATGATGTGGCAGATTCGGGGCCTTCACCTCCAGGTACAAGCTGA
AATATAAATAAAAAGTTATCATAATTATTTTTTCCTTAACAAAGTGTAGA
ATGAGAAATAAAACATCATTTGATGATTTACAGTCAAACAAGGGAAACTG
AAAATGAGGACCACTTAGTGCAAGTAACCTCTTAAAATAAGTTCCATATT
TTGTAACAATTCTAAAATTGAAAAATAGTGCAGTGACATGTTTAAAACAG
GATGCTGTCAAAACAGGGTTGACTGTATATAGCATTTCCACTGATGTCCT
AAATTCCAACATAATTGAAGCAATTGCCATTTTGGGAGCTCCAAGTTGAT
ATTTTTAAAAATGGACGCATTTTCAATAAATTCTGATGAAATATCATCAA
ATGGCTTTAAGTGTAAAAAATACTTAACACCTCTATTAAATATTACTTGA
TCCGAATCAATTAAATCCAAGTAATAACTATTAAAATCCGTTTAATTTGT
ACAATTATTACTATCTTTTTGATCGATTAGGGACGAGAAAAGTCGGAGAA
TAATATCTTATTCTTTCCATTTAAATAGTCAATTTTGATCTATTATATGG
GAATAAAATTTTATAATGACGAAATAGCCTATTTCATTACATTTCAG
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