EMLSAT00000000253, EMLSAT00000000253-696100 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000253
Unique NameEMLSAT00000000253-696100
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1037supercontigLSalAtl2s1037:203199..205046 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000253 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000253EMLSAG00000000253-683019Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001162EMLSAE00000001162-710090Lepeophtheirus salmonisexon
EMLSAE00000001163EMLSAE00000001163-710091Lepeophtheirus salmonisexon
EMLSAE00000001164EMLSAE00000001164-710092Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774438auto774438Lepeophtheirus salmonispolypeptide
EMLSAP00000000253EMLSAP00000000253Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000253

>EMLSAP00000000253 ID=EMLSAP00000000253|Name=EMLSAP00000000253|organism=Lepeophtheirus salmonis|type=polypeptide|length=209bp
MCRILFALNFDIKKINESNKTELRVLDDIKIPIASDLESKKQILASVVST
SLQTKVQSNIAKKRTDICINYGEEGTVIDLHMVELMEIQHRFKADTFPFR
DSVIDHGSCHPEIPTKLTKCYILTMKKLKSTLDSGVFYKSAEEREKSVTA
EWRFIEDHIQKVCDVTHKSFVWISQKCIDPLSLDCLASKGTLGLHRNMRR
NFLLLPVML
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mRNA from alignment at LSalAtl2s1037:203199..205046+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000253-696100 ID=EMLSAT00000000253-696100|Name=EMLSAT00000000253|organism=Lepeophtheirus salmonis|type=mRNA|length=1848bp|location=Sequence derived from alignment at LSalAtl2s1037:203199..205046+ (Lepeophtheirus salmonis)
ATGTGTCGGATTCTATTTGCATTAAACTTTGATATTAAAAAGTTTGTTCA AACTACTTTTTAGTTTCCAAAAAGTCAACTTTTTTCAACTCTACTTATTA AAAATTAATCAAAGTTTCTAAAACCTTTTCATATCAACATATTTGGGGTT CAGCTTATGTTAAGAATATATAATATTATATATAGATGGATAAAACTATC AAACTAGAAATACTACCCATATAACTTTCATAAATGATTCATAATTTTTC TTTTCTAACATATATCTTTTTAAGGAAAGAGAAGTATTAAACATATCAAA TTATGCAGATGTGTTGAAACTTGTTTCAATTATAACTTTATATGCTAAAA ACAAAAAAAGGTTTCAAGATTTTTGAATGAGATTTNATTTTGATTTTTTG AATATAAAATTGTGATATTTTTTGTAACAAGAATGATTAGAAAAATAGAA AAACTGCTATGTCTTTTCCTGTAGTTTATAAGAATTCATTTTTTGTGTTC ATCGCTCAATTATACCGGACCAACTGTTATTATTCATTTAAGTTTCAAAA TTTGTGGCAGAAAATAATACTTTTACCTAACTCCATCTAAGTCAAAATAG ATTATTTCAAATATATATATATATAAATGACAAAGAAAATACTATTCACG TATGACACAAAAATAAAACACCCAAATAATTTAAGGAAAAAATATATAGA AAACTTTAGAAAGATTGGTAATTCAGGTAAAAAAAAATATTTGCTTGTCA AATTATTTGAAAACGTCAAGTACCGAAGAACCTCTAAACATGGATTACTA CTCGTATGGCATAAACTTTATATATTTAATATTTCGAAAAAAAAACCTTT TATACACAAGTCTAGCGTACATAATTACGTATAAAAATAATTCGTATACA AATAAATTGAAGTATTTATTCAACTTTATAAAAGCTTTAGTATGTATACA AACTCATTTACTATCAATAACAAAAAGTGAGTGACTTTATTTCAAAATGT GTATATTTAGTTTTTTATTTAGTCATATTTTATAAATATTTATGACAATT GATTGGATCAGCCACTCATTCTGTTCTCTTTTTCAACTAAATCACATTAT TTTTATGAATGCTATTAACATATGAAGAAATAACGTGGTGATGGAACCGC GTCCACTGCTCTACTCTTTGGAGAATCAATCAAAATGGCAGAGATGTACA TATGTGAATGAGGGAATACATATTCGGATTGTTGTTGAAGGATTAATGAA TCCAACAAAACGGAACTTCGAGTCCTCGATGATATCAAAATCCCCATTGC AAGTGATCTTGAATCCAAAAAACAAATCCTAGCGAGTGTGGTCTCTACTT CCCTTCAAACAAAGGTTCAGTCCAACATTGCTAAAAAGCGCACAGATATC TGCATTAACTACGGTGAAGAAGGCACTGTGATAGATTTACACATGGTTGA ACTTATGGAAATACAACATCGTTTCAAGGCAGATACGTTTCCCTTTAGGG ATTCTGTTATCGATCATGGAAGCTGTCATCCTGAAATTCCCACAAAGCTG ACCAAGTGTTACATTCTTACGTGTAACACAAGTCTTGAGTATGAAAAAAC TGAAGTCGACTCTTGACTCTGGGGTCTTTTACAAATCTGCTGAAGAAAGA GAGAAGTCGGTAACTGCTGAGTGGAGGTTCATCGAGGATCACATACAAAA AGTATGTGATGTAACCCATAAGTCATTTGTCTGGATTAGCCAAAAATGTA TAGATCCTCTATCTTTGGATTGTTTGGCCAGTAAAGGTACTTTGGGTCTC CACCGAAATATGAGACGGAACTTCTTGCTTTTGCCTGTCATGTTATAG
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