EMLSAT00000000259, EMLSAT00000000259-696106 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000259
Unique NameEMLSAT00000000259-696106
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s103supercontigLSalAtl2s103:1015218..1016337 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000259 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000259EMLSAG00000000259-683025Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001199EMLSAE00000001199-710127Lepeophtheirus salmonisexon
EMLSAE00000001200EMLSAE00000001200-710128Lepeophtheirus salmonisexon
EMLSAE00000001201EMLSAE00000001201-710129Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780261auto780261Lepeophtheirus salmonispolypeptide
EMLSAP00000000259EMLSAP00000000259Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000259

>EMLSAP00000000259 ID=EMLSAP00000000259|Name=EMLSAP00000000259|organism=Lepeophtheirus salmonis|type=polypeptide|length=219bp
MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFAN
AHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLV
ETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSAR
ILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFR
AACFCHRQLVDIGFVCSIK
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mRNA from alignment at LSalAtl2s103:1015218..1016337+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000259-696106 ID=EMLSAT00000000259-696106|Name=EMLSAT00000000259|organism=Lepeophtheirus salmonis|type=mRNA|length=1120bp|location=Sequence derived from alignment at LSalAtl2s103:1015218..1016337+ (Lepeophtheirus salmonis)
ATGAGTCCATCAGAGTCCACGGGAAGCGGAGGAGACAGCAAAGCTCAACT
CCTCATTATCGTCATGGATATGAATCCAAACCAGAAGCTATTCCTCCACM
ATCCAACCGCCCTAACCTCTGTTCTGGACAATCTTCTCTGCTTCGCAAAT
GCACATCTCATGCTTCACCCGAGCAACGCACTAGCCACCCTTGGAAGCAT
GGCCTCCGGATCCTATTTCCTCTATCCKCCTCCGGATGATCCAGCAGCAG
ATAACGAAATACGACAGTTGGACGGACAATATGAGTTATTCACTCTTGTG
GAAACAACGGTTCGCTCAAAGTTCATTGAGCTTCTCCAGTCTGAAGCGGG
CATCTCCTCTCAAACAGATTCCCCACTCTCTGGATCCCTTGCCATGGCCC
TCTCATACATAAATCGCCGCAGAAAAGAAAATATGGATTTAAGCGCACGG
ATCCTGGTTATAACGGCTTRAGGGGACACGGCATCACAGMATATGAACTA
CATGAATGTGTTTTTTACTGCTCAAAAATTGGATGTCCTACTCGATACCT
GCATGCTTCAAATCGATTCTCCACTCTTACAGCAAGGAGCGGATATAACT
GGGGGCATGTATTTCAATGTTCCAGATAACGCGGCCTTGCTTCAATTCCT
TCTTTGGATCTTTCTGCCCTCTGCAGAAATGCGTCCACAACTGGGACTTC
CATCTGCTAACAAAGTTGACTTTAGGGCTGCTTGCTTCTGTCATCGTCAA
CTTGTGGATATTGGCTTTGTGTGCTCCGTTTGTTTATCCATCTTTTGTAA
ATTTAGTCCGATTTGCACTACATGCCAAACTATTTTCCGTGTTCCCCCAC
CTTTAATGGGAGSKAAAAGAAAAAAAGTCACGCACACGGTTCGTCGTCTG
TTTTAAAGAGAAAATAATCTGTTCAGTAGTACCTATTTTGTATTCTACAC
CGCATTTGGGGTATGAAGGAGACGGCGGAGAGAAGAATCAGGGAGTAAAT
TGATATGTTTTGGCTGGGCCTTCAAATCCCTGCATTTTTAAACAATGGAA
ATGGGATAGAAAAGTGAAATACATATATATATATGATATCTTAAGTTCAA
TATTTTTATAGATCAAATAA
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