EMLSAT00000000260, EMLSAT00000000260-696107 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000260
Unique NameEMLSAT00000000260-696107
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s103supercontigLSalAtl2s103:1017149..1018491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000260 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000260EMLSAG00000000260-683026Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001202EMLSAE00000001202-710130Lepeophtheirus salmonisexon
EMLSAE00000001203EMLSAE00000001203-710131Lepeophtheirus salmonisexon
EMLSAE00000001204EMLSAE00000001204-710132Lepeophtheirus salmonisexon
EMLSAE00000001205EMLSAE00000001205-710133Lepeophtheirus salmonisexon
EMLSAE00000001206EMLSAE00000001206-710134Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780263auto780263Lepeophtheirus salmonispolypeptide
EMLSAP00000000260EMLSAP00000000260Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000260

>EMLSAP00000000260 ID=EMLSAP00000000260|Name=EMLSAP00000000260|organism=Lepeophtheirus salmonis|type=polypeptide|length=169bp
MTTTPPDVPLTDSWVDLSGPFNVSTSPLRVTPIPFGGEQDYLRMLREAQR
ESSRSSNKVSPISSAFMSLSSTCRNTPIQSPKSRPNTPNPDMTFYPDDLD
DVYVNRIKNEDSSKSLNNNIASDLIWDWSSRSKEWKTVHGNGSSGRSRKS
SSSRFGFANVVEVMIFLNK
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mRNA from alignment at LSalAtl2s103:1017149..1018491-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000260-696107 ID=EMLSAT00000000260-696107|Name=EMLSAT00000000260|organism=Lepeophtheirus salmonis|type=mRNA|length=1343bp|location=Sequence derived from alignment at LSalAtl2s103:1017149..1018491- (Lepeophtheirus salmonis)
AAATTCATTGATTACTCCACCTTTGGCATGACTACCACACCGCCTGATGT
TCCTTTGACTGGTAAAGGTTTTATAAATGATCTCTTTATATAAGTAATAT
CCACTCATTTCTTTTTTTTTTGTGTGCCTTCTAGATTCCTGGGTTGACCT
TTCTGGCCCATTCAATGTCTCCACATCACCACTTAGAGTAACTCCAATCC
CTTTCGGAGGTGAGCAGGATTATTTAAGAATGTTAAGAGAAGCACAAAGA
GAGTCTAGTCGTTCATCTAACAAAGTATCACCAATTTCATCGGCGTTCAT
GTCTTTATCCTCAACATGTCGTAACACTCCAATTCAATCGTAAATATATA
CATTGTGTAGTAAAGAAAAACATATTTTGCTTCATACATTTTTATTATGT
TTTAGACCTAAATCTCGGCCCAACACGCCAAACCCTGACATGACCTTCTA
TCCTGATGACTTAGATGATGTTTATGTCAATCGTATTAAAAATGAAGACA
GTAGTAAGTCCTTGAACAATAATATTGCATCAGACCTCATATGGGATTGG
TCCTCCAGATCAAAGTAAGGGGTTTTAAGGAACTAATCTTGTTATATATA
TGTTTTTAATGCGAATTTTCAATTGACTTTTCTAGGGAATGGAAGACTGT
TCATGGAAATGGTAGCTCTGGAAGAAGCCGCAAATCTTCCTCTTCAAGTA
AGCCAAGTATTCGAAATCCAAACTCTATGAAGAAGAAATACTTTTCGAAA
AAATTGGCATTGACTGTAGTTTTGACGAATCTTATTTCATTGATTATTGG
AGCTGGAATAGGGTATGAAAGTCCTTTGTCTTATATATGTATACAGGGCC
GGTTTAAGCGTGAGTGGGTCATGGACGAAAGATATATGTGCGGGGCCCTT
TTCTTTCTTACCTTTTTAAAAATTTGACTTTAATTGCGAATCTTATTTTT
GTAGAAAATAAATTGTGCCACTTCTTATAATTAATTTTAAGGGTCAGCTA
TAATATTTATGGGAGGCAAATCTGGAGAGTATGATTGAAAAAACTTAAAT
GGCTAAATTGGGTATTTTTTTCAAAAATAAGACATTTCTACCCTAAATTG
TGTATCTGAAGTCACAGGGTTTAGGATGATCTTATACAAGGTTTAGCATT
TTTATTCCTAGGGAATATATATATATTTATTTATTTTTTTACAAAGTTAT
ATCCAGCACGGAGCTCGAAGTAATGCCCACTATAACCGGCACTGTGTTCA
CATATTTAACAAGTTGTTAATCTGAATTTTATTATTTTTTCAGGGTTTGG
CTTTGCAAACGTGGTGGAAGTAATGATTTTCTTAAACAAATAA
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