EMLSAT00000000263, EMLSAT00000000263-696110 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000263
Unique NameEMLSAT00000000263-696110
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s103supercontigLSalAtl2s103:645619..649421 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000263 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000263EMLSAG00000000263-683029Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001215EMLSAE00000001215-710143Lepeophtheirus salmonisexon
EMLSAE00000001216EMLSAE00000001216-710144Lepeophtheirus salmonisexon
EMLSAE00000001217EMLSAE00000001217-710145Lepeophtheirus salmonisexon
EMLSAE00000001218EMLSAE00000001218-710146Lepeophtheirus salmonisexon
EMLSAE00000001219EMLSAE00000001219-710147Lepeophtheirus salmonisexon
EMLSAE00000001220EMLSAE00000001220-710148Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779097auto779097Lepeophtheirus salmonispolypeptide
EMLSAP00000000263EMLSAP00000000263Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000263

>EMLSAP00000000263 ID=EMLSAP00000000263|Name=EMLSAP00000000263|organism=Lepeophtheirus salmonis|type=polypeptide|length=322bp
MEFRKFFRSTSSLRDLILSLPPAARLGETVLINCNYHLQGEELYTVKLYK
GRHEFLQIVPDKTPPVKTFPRKGINIKDVSLDGNGKHIVGVNITLSDVNL
FTTGLYGCEASADSSFHTQLVRKYLTVLVQPADRPEVIGFKNTYQVGEKL
NMTCSLKNTFPSANITWFINGNRGLGFIKFYSTSTAQNSGLITSTSVLSL
HLQPMHFPNGRLTGKCVASILTMHWQSLDIDIKEEHPKAASVLSGDDDEN
KGVVEEDESGKISNSTIKRDETDELDETEDNHILVKVIDHHKNNSLRIGH
HCCSLWILILSFLVQMLITNAS
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mRNA from alignment at LSalAtl2s103:645619..649421+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000263-696110 ID=EMLSAT00000000263-696110|Name=EMLSAT00000000263|organism=Lepeophtheirus salmonis|type=mRNA|length=3803bp|location=Sequence derived from alignment at LSalAtl2s103:645619..649421+ (Lepeophtheirus salmonis)
ATGGAGTTTCGGAAATTTTTTCGAAGTTATTAGGTATCTACAAAAAGACA ATAAACATTTTTTTAACTTTGATTTGGTTTATGAAGTATTTTGCCAGTAC TTTTTGGACAAAATTTCCGTAGATATGAGGTCATAAGTCCCTTCCATTGT GAATAATAATAACTTCTTATATATTTAGCCTAAATATTTTTAAAGGGAAG CCTTATTTATCATTGGAAGTAAATTGCTCAATATTAAAAAGTCTATTAGG GATTGTACTGTATGTATACATTTATTAATTTGGGTTATTTTTTTGTATTA TTAGATTTTAAAAGTGAGGTCAGATTTGTACCTGTAAGCATCTTATTAAC AAATAAATATATTTTGTATTTGTTTATAAAAAAAAAGAGATAATAATATA CAAAATGATAAAACACATCCCAGCCACTGAAAAAAGTCGTATAGTCGAGG GATAATTTTAATAAATTTCCAAAGTTTTCAAGTTAACTTCATGATMCCTC MCAGCCACAGGTTCATCTTCAATGTCTTCTTCTTTTTTTTTGACATTTGG CCTTATTTTGACTAGCAATCGGTATTGTTAAGTACTGAAAAATGTACGAA AGATCATATGAATAATTATAAATTTATATATATAAGTAAACCGTGTACAA TTTATAGCAATCTTTATTTTTTAGAGAAGTCAAATATTTAAAGGAATATT TTATTTGTACAAAAAAGAAATTATTAAAGAATAGAAAGTCGAAAAAAAAA ATTAATTAATTAATTTTAATATTAAACATTTTAGTATTACCCCATACCGA ACCACGTACAGTGAAGGGTGTACCGCGGTTCGTACCGAACCGTATGTTTA GCCCTAAGATGTATTATTCAAATTGATCAATGGGTTTTTGTAATCTCAAT TGTCATTTAGTGATATGTTCCACTTCGTATATCATCACCATCAATGACAT TTGAAATTGTGTTTGAAGACCCTCCAATTAATTTGTCCAAGAAGTCATCT AATAGACTTTTGGGNNAAGATGTATTATTCAAATTGATCAATGGGTTTTT GTAATCTCAATTGTCATTTAGTGATATGTTCCACTTCGTATATCATCACC ATCAATGACATTTGAAATTGTGTTTGAAGACCCTCCAATTAATTTGTCCA AGAAGTCATCTAATAGACTTTTGAGCTTCTTACTGTGATATATAATCAAA ATTATATTCCTATAATAATCTCCATATCCAAATACATTAATCATCTGCCG TTGAAATATTCGGTTAACATGGGAAGAGAAATGACTTACACAATTCTGTT TGAATTAATATAAAGGCTGGCTGAGGAATATCAAGGATCTCTCTCGGATT TATTGTTTTTATGAAAGATGATGTTCCATGATTTTAAGTATTAATTAATT GCATTCTTTTTCTTCTCATTGTAGGGAGATTCTATTAAATATACGTCAAG CAATACATGTGACTGCTAAATAAGTTTAGTGGAAATTTACAAGTCAAATA ACTATGCAAGCAATAATTTTTGCAATAGCTTTTCCTGACGATGTAATTTT TSTAACAATTTGTTATTACCATCATAAAATAGTACTCACCATGGATATTA TAGGAAGTCATATGCTGTATTCTTTCCTGGTTGATATATTTATGGAATAA ATATATTGATATTTTGTATAACTGTAGAAATATATAAAAATTACCAGGAG TGTGATAAAGAAATGTTTGTCAAAATACAGGCTGTTTCTCAAAAGATTAT TGAGGATATTTTATAAATAGGTTGTCGAGTGTCAATCAAACATGACAATA ATTTAGAATTTTAATATTCTTAATTAGTACAAGTTTTTCACAGATCCTGT TATAAAACAAAATGAAAAGATTCTTTGAATTTGATGACTGTGTTGAAACT AATTTGGACTATGAAAGTGTCTTATGATTGGGTGTCATATTTTTTTAATT TTGATATTCTTATGTTAGCATAATAATAACTTTAATATATCTATTTTGTA TATAAAAAAATATAGGTAAGCTAAAATTATAAAATTAATATAATTTTATA CTTGACATTTTTTGATTTTATTTATTTTTAAATTTTCAAATATTACATTT TTTATTAATCCTTAAATATAACAGGGAATAAGAGATTCACAAAAAACAAA AACTTTTTTTTTTCATAATGCTTAATATGTGATTTAGCAAAGTATTTACT TGATCATTCACCACAATTTTTACTTTAACTTTGACATAGGTACATCAAGT CTACGTGATCTCATACTCAGTCTTCCCCCTGCAGCAAGACTTGGAGAAAC AGTTTTAATAAACTGTAATTACCATTTGCAAGGTGAAGAATTATATACAG TAAAGCTCTACAAGGGACGACATGAATTCTTACAAATAGTCCCTGATAAG ACTCCACCAGTAAAAACATTTCCACGAAAGGGCATCAATATTAAGGTACA ATAAATTAAACTAATTAATAAAAGTTTATCATGGGATTACGATGGCGTAT CTTTGATTGTTTTGACATCGATCAATATGAAAATTACCTGGATTATGGAC AACAGAGTGCACTATTGTTTATACTGTCAAAAAAGTACAATATTTTAATA TTTATATACAATTTTTTTCAGCTACAAATGTTAAGTAATTTTGACAGTAG TATTGTTTAAGGTGTCCATTAAACATAAATGAAACTACAAGTGTTTAGTT TAGAAAAAACAAAAAGATCCAAGTGCACAACCAAGTTGGATCTTTGTCAA CAAGATAAAAATCTATTAATCATGAACTAAAAATCATTTTATAAAAAGTT AATATATTTAAAGTACATATTAAATTAATAATTTTGTCGATAGGATGTAT CACTAGATGGGAATGGAAAACACATTGTGGGGGTAAATATTACCCTTTCA GATGTAAATTTATTTACTACTGGTCTATACGGATGTGAAGCATCCGCTGA TTCTTCTTTTCATACACAATTGGTCAGAAAATATCTTACAGTATTAGGTA AGTTTATTTTTTCTCTTATGAGACTATTATATCTTTATTTATTATTATAT TCAATAGTACAACCTGCAGATAGACCTGAAGTTATAGGCTTTAAAAACAC CTATCAAGTTGGGGAAAAGCTCAACATGACATGTTCGTTAAAAAATACTT TTCCTTCGGCAAATATAACATGGTTCATCAATGGGAATCGAGTAAGATTA TAAAAAAGGATTTTAAAAGAGAGTGTTGAAACTATGATATTTTTAATTCC TTACAGATTGACAAAAAAAGGGATTAGGATTTATTAAATTTTATAGTACA AGTACAGCACAAAATTCAGGACTTATTACCTCAACCAGTGTTCTTAGTTT ACATTTACAACCCATGCATTTTCCCAATGGAAGACTCACAGGAAAGTGTG TTGCCTCTATTCTCACGATGCATTGGCAAAGCCTAGACATAGACATCAAA GAGGAGCATCCAAAAGCAGCTTCTGTATTATCAGGAGATGACGATGAGAA CAAAGGAGTTGTAGAGGAGGATGAAAGTGGAAAAATATCTAATTCGACGA TTAAAAGGGATGAAACTGATGAATTAGACGAAACAGAAGATAATCATATC TTAGTAAAAGTTATTGATCATCACAAAAATAACTCCTTGAGAATTGGACG TAAGAAATTTATATGTTTTTTTATATTAAATTAATTTGAAAACTCTAAAT CTCCATTTCCAGATCATTGTTGCTCATTATGGATCTTGATTCTAAGTTTT CTGGTACAAATGTTAATTACAAACGCATCTTGACAAACTACATTAAATAC AGC
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