EMLSAT00000000264, EMLSAT00000000264-696111 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000264
Unique NameEMLSAT00000000264-696111
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s103supercontigLSalAtl2s103:974376..978866 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000264 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000264EMLSAG00000000264-683030Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001221EMLSAE00000001221-710149Lepeophtheirus salmonisexon
EMLSAE00000001222EMLSAE00000001222-710150Lepeophtheirus salmonisexon
EMLSAE00000001223EMLSAE00000001223-710151Lepeophtheirus salmonisexon
EMLSAE00000001224EMLSAE00000001224-710152Lepeophtheirus salmonisexon
EMLSAE00000001225EMLSAE00000001225-710153Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780200auto780200Lepeophtheirus salmonispolypeptide
EMLSAP00000000264EMLSAP00000000264Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000264

>EMLSAP00000000264 ID=EMLSAP00000000264|Name=EMLSAP00000000264|organism=Lepeophtheirus salmonis|type=polypeptide|length=632bp
MTSLARLAXXVRKGIVKPGIASSTRGLHFTVNGQNNAKVNNDALSHVYPV
VDHEYDAVVVGAGGAGLRAAFGLVQEGFKTAVITKLFPTRSHTVAAQGGI
NAALGNMEPDDWRWHMYDTVKGSDWLGXQDAIHYMAKEAPAAVIELENYG
NIELNSAFFLLLLSFCMLLGMPFSRTTDGKIYQRAFGGQSYEFGKGGQAH
RCCCVADRTGHSLLHTLYGQSLRYDCNYFIEYFALDLLMQDGECVGVIAM
CLEDGSIHRFKSKNTVLAAGGFGKSYFSATSAHTCTGDATAMVTRAGLAN
QDMEFVQFHPTGIYGAGCLMTEGCRGEGGYLVNSEGERFMERYAPVAKDL
ASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPHDQLAQRLPGISETA
MIFAGVDVTREPIPVIPTVHYNMGGVPTNFKGQVIGHKDGSDFIVPGLYA
AGETACASVHGANRLGANSLLDLVVFGRACALTIAEEDAPGDKVPALKDN
AGEASVANLDSVRYADGSIPTAKLRLNMQKIMQNHAAVFRTGEVMREGIH
KMNDIWTQMKDLKVSDHRMDEYDYSKPLENQHAKPMEQHWRKHTLSHVDV
KDGKVDLDYRPVIDLTLDEKECSWVPPAIRSY
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mRNA from alignment at LSalAtl2s103:974376..978866-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000264-696111 ID=EMLSAT00000000264-696111|Name=EMLSAT00000000264|organism=Lepeophtheirus salmonis|type=mRNA|length=4491bp|location=Sequence derived from alignment at LSalAtl2s103:974376..978866- (Lepeophtheirus salmonis)
ATGACGTCTCTTGCCCGATTGGCTARTAMTGTTCGGAAAGGKATTGTCAA
ACCTGGAATAGCCTCTAGCACCAGAGGTCTTCACTTCACTGTCAATGGAC
AAAATAATGCCAAAGTAAACAACGATGCGTTATCACACGTCTACCCAGTC
GTTGATCACGAATATGATGCTGTCGTAGTTGGAGCAGGAGGKGCTGGACT
TCGAGCCGCTTTCGGCCTTGTTCAAGAAGGCTTTAAAACTGCTGTTATTA
CCAAATTGTTTCCAACACGCTCACATACCGTTGCTGCTCAAGGGGGCATC
AATGCTGCTCTTGGAAACATGGAACCTGATGATTGGCGTTGGCACATGTA
TGACACTGTCAAAGGTTCTGATTGGCTTGGAGRTCAGGATGCTATTCATT
ATATGGCTAAAGAAGCACCTGCTGCTGTAATTGAATTAGAAAATTATGGT
AATATTGAATTAAATAGTGCCTTTTTTTTGCTTTTGCTGAGCTTTTGTAT
GCTTTTAGGAATGCCATTTTCTCGAACCACCGACGGTAAGATTTATCAAC
GGGCATTTGGTGGACAATCCTATGAATTTGGCAAAGGAGGTCAGGCTCAT
AGATGCTGTTGTGTAGCTGACAGAACTGGTCATTCTTTACTTCACACTCT
ATATGGACAAAGTTTAAGGTATAATTGACTCATTAAATGAGTTATTGGGA
TTTACTATATACATAAATAGACACTTGTTAGAATGGAAGGGATTCACGTA
TTTTAACTTTAGTACCTGATACATGTACAAAATCATATTTGATAGTAAAT
AAACACCATCAAACTCAACTAAAATTCGACATGTATTTCTATACATTAAA
TATAGATTTGTTCTCAAATTGGTTTAACGATTAAACACCAATATTTGGAT
ATTAATAATATTAAATTGATATTCCTAAAAAATATAATTTTTATCAAAGT
ATCTTGTAGTGTTGTTCTATATACAAAGGCTTTTTATCGTTCCCTTTAAT
TGTTCACTTTTTTTTAAATACGATTTATCTCACTAAAACGTTCACTTTAA
CTCGTTCACTTTCTAACTTCTTTTTCGTTTTGTTTTGACTAGTTTCAGAA
AAATAAAATGCATTATAGTAAATCAACAAATTTTCAACATTTTTTAATAG
ATCTAGAAATGAATTTGAGGGTGTCCGGTACTTTTTCCTTGAACTATTTT
CACTTGTTTTTAAGCTACTTTCGCTGAAGGATATTTTGCCTTAAAATATA
AATGAATAATGTTTATTTTTGGGTTGAAATTGACTTTCCCTTTGAATTTT
TTAATCAAAATATGTAATGTGTATTACTATAAAACACGTTAGATGGTTTA
TTTTCTGTTGGACTAATGATGGAATTATTCTCTTTCCTCATATTATACTT
TTTTGTCAATCCATGAGTCTTTTCTCACATGAATTATCGATCATTTTTAA
TGATAATTAATATCAAAGTAGTGATTGGCACTTTTTTCGTTCGAATCGTT
GTCCTGTTATATTATTTTTATTTATTATACTAATTTTATTAACTGTTTTG
TCTCTAGTTCGAACTCATTACATTGTGATATTTCGATAGTTTATGTATTG
AAATGTTGGGCATAATTCTATCATTATTCACTTATATTTTTAGGTGAAAT
ATCCATGAGGCAAAAAAGCTTTAAGGCAAAAATACATAATTCCGAATTTA
AGGTACGGAATCATGAGCATACTCTCATTCAGTGAGGAGAACAATTGGAG
CAAAAACTTATACATATAGGGTTTTTCCTAACTTCAGCAAGGTTTTCTAT
AAAAAAAATAAGCTGGAATTAATAAGCTCACGGTTAATTGAATTGCAATT
CCCTTTTAATCTTTATTCCTTTGATGTGTTCCCTATTTTTATTTATTTCA
GATACGATTGTAATTACTTCATTGAGTACTTTGCACTGGATTTGCTTATG
CAAGATGGTGAATGTGTCGGAGTAATTGCCATGTGCTTAGAAGACGGATC
CATTCATCGTTTTAAGTCCAAGAACACAGTTTTGGCCGCCGGTGGTTTTG
GAAAGTCATACTTTTCCGCTACCTCAGCTCATACTTGTACTGGAGATGCT
ACTGCTATGGTAACCCGAGCGGGACTTGCAAACCAAGATATGGAGTTTGT
TCAATTCCATCCTACTGGTATTTATGGAGCAGGCTGTCTCATGACTGAGG
GTTGTCGAGGAGAAGGAGGCTATTTGGTTAATAGTGAGGGTGAAAGATTT
ATGGAGAGATATGCCCCTGTTGCTAAGGATCTAGCTTCTAGAGATGTAGT
TTCTCGTTCAATGACCATTGAGATTAGAGAAGGAAGAGGATGTGGTCCAG
AAAAGGATCACGTTTACCTTCAACTTCATCATTTGCCCCATGATCAATTG
GCTCAAAGATTGCCTGGTATTTCTGAAACTGCTATGATCTTTGCTGGAGT
GGATGTTACCAGAGAACCAATCCCGGTTATTCCAACCGTTCATTACAACA
TGGGAGGAGTGCCAACCAATTTCAAGGGACAGGTAATTTTTTAATTTTTT
GACGCTCAATCTCGCAATTAACATTTATATATATATATAAAAAATAATTA
CTTAGGTTATTGGTCATAAAGATGGAAGCGATTTTATTGTCCCAGGTTTG
TACGCTGCTGGAGAAACTGCTTGTGCCTCCGTTCATGGAGCTAATCGTCT
TGGAGCCAATTCTTTATTAGATTTAGTTGTATTTGGTCGTGCTTGCGCAT
TAACTATTGCCGAAGAAGACGCTCCTGGAGACAAAGTCCCAGCCTTAAAA
GATAATGCGGGTGAAGCTTCAGTGGCAAATCTTGACTCAGTAAGATATGC
TGATGGATCCATTCCTACCGCTAAACTTCGATTGAACATGCAAAAAATCA
TGCAAAATCACGCCGCTGTTTTTAGAACTGGAGAGGTTAGTTTTTTGTCA
TTAGTAAGCGGTCTAAGATAAGTGTTTTTATTTATCTATTTAGGTAATGC
GTGAAGGTATTCACAAGATGAATGATATTTGGACTCAAATGAAGGATTTG
AAGGTATCTGATCGTAGTCTCACATGGAATTCTGACCTTGTTGAAACACT
TGAATTGCAAAATTGTATGATTAATGCTGTACAAACCATCGTGTCAGCCG
AAGGGCGGGAAGAATCCAGAGGAGCACATGCTAGGTTAGTTCAATGAATA
TACATTAGTTTGGCCCGTTTTCGGATTAATATTTTCTTCACACGCACAAA
AGAAACTTACTGGCAAAGTTTCAGGGTTTCAGGCATTTTAATTTGATAGT
AATCGAACTTTTGTTTCGAAATCGGTAGTTTTAGGCCTCTTTTACTGTCC
CAAATGTGATGCTATCAGTTAGAAATTGTACTTTTTATATTTTTTAGTAT
GTCAATTATCTGTATAAAATAACTTCCACCTTGTTTAAAAAATTTAAAGG
GTCTAAGATGTGCTCAATTATTTGGGATTTCCCTGTTTTATCAAATATAA
TGCTCCTCATTTACAACTCTTACTTTAACTAGGGTTAAACTTTGCTGTTA
TGTTTTATAAATAGGTAAATTGAAAACCATTGAGAAATCTGAGACTGTGC
ATGGAAAATTGCCCTGGAGAAAATTGGCAATGAGAAAATTGGAGTTGGGG
AAATTTTTTTCTGACAAAATCAGAAACCACAAATCAGGTTAWAAACCAAM
SCCGCCACTTCACAATGCATGTAGGCTCTTTCCAAATGCTCCAAAATAAA
TCCCGGGCCCATGAGTTGATTAAAACTACGACAGGGYCACCAAACAGGTW
AAAAACCAAAGTCAACMCTYCAMAAGCCATTTCAGCGCCCTCAAAATACT
TCAAAATGAACCCCGGCCCATGGATTTTAAACTGATTAGTATTTTTGGCG
TAGCCTTAATCTACCCATGGTGCTGGGTTTATTTTGAAATATTGGAGGTT
GGGGGGGGGGGGAGGGGTCAAAATACATTGTGAAGTGTTGTTGGTGGTTT
TTAACCTGCTTGGTGGTTCTGAAATTGCATAAAACAAGATTTGGGCTGCT
GAGGTATTGTGTTTTTGTTAGTAATTGATGGGAAATTTTCATAATGGTAA
TTTTCCATACCAGACATTTTCTCCATGGCAGTTCCACCAAATGACAATTT
TCTCAAGGGCAATATTCTTAGAACCATCTTAAATCCCTTGAATTATTAAA
AACAAGGTGACTGACTTTCAGACTACATAATGTTTTATTACTCAAAATTT
CTTTCTTTCGATATTTTATCTATTTAGAGAAGATTTCAAAGACAGAATGG
ATGAATACGATTATTCCAAGCCTTTGGAAAATCAACATGCTAAACCAATG
GAACAACATTGGAGAAAGCATACTTTATCCCATGTTGATGTCAAGGACGG
AAAAGTCGACTTGGATTATCGCCCAGTAATAGACCTTACTTTAGATGAAA
AGGAATGCTCATGGGTTCCTCCAGCAATCCGATCTTACTAA
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