EMLSAT00000000270, EMLSAT00000000270-696117 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000270
Unique NameEMLSAT00000000270-696117
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1041supercontigLSalAtl2s1041:57715..58816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000270 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000270EMLSAG00000000270-683036Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001254EMLSAE00000001254-710182Lepeophtheirus salmonisexon
EMLSAE00000001255EMLSAE00000001255-710183Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770926auto770926Lepeophtheirus salmonispolypeptide
EMLSAP00000000270EMLSAP00000000270Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000270

>EMLSAP00000000270 ID=EMLSAP00000000270|Name=EMLSAP00000000270|organism=Lepeophtheirus salmonis|type=polypeptide|length=345bp
MTKGRKGSQSSSIFLPRKSTLLWIILTICLLYGIHLLRSTNSRTVNLKEL
LSVSIEAARRGGYEVKKVREKADIGEKSKGETHEGANNPVTDGDMLSHRA
MYNGILKAFPNIHIVSEESDPKPYDLDKIQMPPLRNTEVEEIISDGFYDI
PIEDIDVWIDPLDATQEYTENLNKYVTTMVCVAIKGKPVLGVIYKPFEDV
LVWGWAEDVNKVNHVLREDFLKSKLGNSSKNNRFIVSRSHAGDVDQTAKK
VFGQDTVTTPAGGAGYKVLEVIKGHQDAYIHVTLIKKWDICPGNALLRAL
GGNLTTLKGEEVNYSDKDEKNKGGVLAALHDHDRYVRAFREYKNP
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mRNA from alignment at LSalAtl2s1041:57715..58816-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000270-696117 ID=EMLSAT00000000270-696117|Name=EMLSAT00000000270|organism=Lepeophtheirus salmonis|type=mRNA|length=1102bp|location=Sequence derived from alignment at LSalAtl2s1041:57715..58816- (Lepeophtheirus salmonis)
ATGACCAAGGGAAGAAAAGGCTCACAGTCTTCCTCCATTTTTCTACCTCG
CAAATCAACATTACTATGGATTATTCTCACAATTTGTCTCTTATATGGCA
TACATTTACTTCGCTCTACGAATTCAAGAACAGTGAATCTCAAGGAGCTC
TTGTCTGTTTCCATTGAAGCAGCTCGGCGTGGAGGATACGAAGTGAAGAA
AGTTAGGGAAAAGGTGTGATATTATTATTTTATTTCAAATTGAAGAGTAC
TTTAATAATTATACGAATACTTTTTAGGCAGACATTGGTGAAAAGTCTAA
GGGAGAAACACATGAAGGTGCTAATAACCCTGTCACCGATGGGGATATGC
TCTCTCACCGAGCAATGTACAATGGAATCCTCAAGGCTTTTCCTAACATA
CACATCGTGTCTGAGGAAAGCGATCCGAAGCCCTATGATCTGGATAAAAT
TCAAATGCCTCCTTTGAGGAATACAGAAGTAGAGGAGATTATATCTGACG
GTTTTTATGATATTCCTATCGAGGATATTGATGTCTGGATTGATCCTCTT
GATGCGACACAAGAATATACTGAGAATCTCAATAAATATGTCACAACCAT
GGTCTGCGTTGCTATAAAGGGAAAACCAGTTTTGGGTGTGATATATAAAC
CATTTGAGGATGTTCTAGTCTGGGGATGGGCTGAAGATGTAAATAAAGTA
AATCATGTATTAAGGGAGGATTTCCTAAAGTCAAAGCTTGGCAATTCTTC
TAAAAATAATCGTTTTATTGTCTCGCGTTCGCATGCTGGGGACGTTGATC
AAACGGCGAAAAAGGTATTTGGTCAAGACACAGTTACGACTCCYGCTGGT
GGAGCTGGCTATAAGGTTTTGGAAGTAATAAAAGGGCATCAGGATGCTTA
TATTCATGTAACTCTCATAAAAAAGTGGGATATTTGTCCAGGTAATGCTT
TATTAAGGGCATTGGGAGGGAATCTAACGACCTTAAAAGGTGAAGAAGTT
AATTATTCTGACAAGGATGAAAAAAATAAGGGTGGAGTTTTGGCTGCTCT
TCATGATCATGATCGATACGTTCGTGCATTTCGGGAATACAAGAATCCTT
GA
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