EMLSAT00000000276, EMLSAT00000000276-696123 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000276
Unique NameEMLSAT00000000276-696123
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1041supercontigLSalAtl2s1041:88294..89557 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000276 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000276EMLSAG00000000276-683042Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001274EMLSAE00000001274-710202Lepeophtheirus salmonisexon
EMLSAE00000001275EMLSAE00000001275-710203Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771816auto771816Lepeophtheirus salmonispolypeptide
EMLSAP00000000276EMLSAP00000000276Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000276

>EMLSAP00000000276 ID=EMLSAP00000000276|Name=EMLSAP00000000276|organism=Lepeophtheirus salmonis|type=polypeptide|length=309bp
MRGSFRTLASHPGLHSASAPGILSLDVNANDTSKILTGGADRSATVFNKD
TEQIVANLKGHSKKISRVIYHPSSDDTVITASHDTTVRVWHVPSSQTLKI
LRIHDGPVTGLSLHATGDYILSTSTDRYWAFTDLRSGRLITKVTADSSAG
GASSSVALTCAQFHPDGLIFGTGTSDSEIKIWDLKEQQNVANFPGHNGSI
TALSFSENGYYLATAADDACVKLWDLRKLKNFKTIALEDGYEVRDLCFDQ
SGTYLAVAGTDVRIYQCKQWQELRVFNDHTAMATGVRFGKHANYVASTSM
DRTLKLYGL
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mRNA from alignment at LSalAtl2s1041:88294..89557+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000276-696123 ID=EMLSAT00000000276-696123|Name=EMLSAT00000000276|organism=Lepeophtheirus salmonis|type=mRNA|length=1264bp|location=Sequence derived from alignment at LSalAtl2s1041:88294..89557+ (Lepeophtheirus salmonis)
TTTGGTGTCTGGTGAAGATATGCGAGGTAGCTTCCGTACCCTTGCATCCC
ATCCTGGTCTACACAGTGCCTCTGCTCCTGGTATTTTGTCTCTAGATGTC
AATGCTAATGATACAAGTAAAATCCTTACTGGAGGTGCAGATAGAAGTGC
CACTGTTTTTAACAAAGACACGGAGCAAATTGTTGCCAATCTCAAAGGAC
ACTCTAAAAAGATATCAAGAGTCATATATCATCCATCTTCAGACGACACT
GTCATTACCGCTTCTCATGATACAACTGTTCGTGTCTGGCATGTGCCTTC
TTCTCAAACCCTTAAAATTTTACGAATTCACGATGGACCTGTCACTGGAT
TATCTCTTCACGCTACGGGTGACTATATCTTGTCCACATCCACGGATCGC
TATTGGGCATTCACTGACTTGCGAAGCGGMCGACTTATAACTAAAGTCAC
AGCTGATTCATCGGCCGGAGGAGCTTCTTCCTCTGTTGCACTGACTTGTG
CACAATTCCATCCTGATGGTCTCATTTTTGGCACTGGCACATCAGATTCA
GAAATTAAGATTTGGGATCTGAAAGAAGTGAGTCATCATAAGAATTATAA
TAGTTTTACTGACGAGTTTTTCAGTTTTTAATTTAATTATTAATTAATTG
ATTTTTAACACTAATAGCAACAAAACGTAGCTAACTTCCCTGGACATAAT
GGTTCAATCACTGCGCTTTCGTTTTCTGAAAATGGTTACTATTTGGCTAC
TGCTGCAGATGATGCTTGTGTAAAATTGTGGGATTTGCGTAAATTGAAGA
ACTTCAAAACAATTGCATTGGAAGATGGTTACGAAGTACGAGATCTATGT
TTTGATCAAAGTGGTACCTATTTGGCAGTTGCTGGTACTGATGTTCGTAT
TTACCAATGCAAGCAATGGCAAGAACTTAGAGTATTTAACGATCATACAG
CCATGGCTACAGGAGTCAGGTTTGGAAAGCACGCAAATTATGTTGCATCT
ACTTCTATGGATAGAACTCTTAAATTATATGGTCTCTAATTTAATTATTC
TTTGTAATTCTTAATGATTTTTTTAAATTGTATGCACTCTTGAATTACGT
AGTTAAGGAATAAAGTGAAATATAATCAAGGGTTGAACATCATCCTGAGT
TTTGGCTTCTTTTGAAAATATTTACTGTGACAGCAAGGTTATAATTAGGC
ATGCGACTAATCAAATAATTATTTGAATAATTCTTATTGTCTTTCCTCAA
GACCTACATAATAA
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