EMLSAT00000000279, EMLSAT00000000279-696126 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000279
Unique Name	EMLSAT00000000279-696126
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1042	supercontig	LSalAtl2s1042:100504..106238 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000279 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000279	EMLSAG00000000279-683045	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000001280	EMLSAE00000001280-710208	Lepeophtheirus salmonis	exon
EMLSAE00000001281	EMLSAE00000001281-710209	Lepeophtheirus salmonis	exon
EMLSAE00000001282	EMLSAE00000001282-710210	Lepeophtheirus salmonis	exon
EMLSAE00000001283	EMLSAE00000001283-710211	Lepeophtheirus salmonis	exon
EMLSAE00000001284	EMLSAE00000001284-710212	Lepeophtheirus salmonis	exon
EMLSAE00000001285	EMLSAE00000001285-710213	Lepeophtheirus salmonis	exon
EMLSAE00000001286	EMLSAE00000001286-710214	Lepeophtheirus salmonis	exon
EMLSAE00000001287	EMLSAE00000001287-710215	Lepeophtheirus salmonis	exon
EMLSAE00000001288	EMLSAE00000001288-710216	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto772129	auto772129	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000279	EMLSAP00000000279	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1042:100504..106238+

protein sequence of EMLSAP00000000279

>EMLSAP00000000279 ID=EMLSAP00000000279|Name=EMLSAP00000000279|organism=Lepeophtheirus salmonis|type=polypeptide|length=1438bp
MESKTLRTRKRNKSLKESAKLVLESIPQIPIHVTEIKKLILKDQPSVETR
ELRDGNLLSVLTNGSTGRNPTFFKAFGHDDVFGLKSCIPEGGTTLEVVEK
VPSGDEGGVSQEEGVLYVQLPEGHPIISNSTPEQEEDDEDEEVEQESSPP
PVSYRDEGNSQASTSPDGGENATQLKDTQTKLSIEEAIEKADIIFEDISL
KNKGLALESSNEHKSDIRSENSKSSHNLRPKRTLRSVHPITTTFSSSQSL
TKKKKKFSISSSIIPNTGSGNYKKSSITSNGDIEIHYKPNRNDLLMAQAT
TMKEVLSSIHGFSLSKVKAGNKKTGSKKLSNVASIQLAREGSLDFESPES
ILGQVNLRTLLNKATFLKLPPSYQYKLMQLLPQVDFVREDCPNLEETIKL
RQSGLNNEFFAKASQEWRERLHKGDFSSDVVQRNKQDIEKDKSKIDPWKF
RNFEPIWGMTKNFDLEDSLPEIDIPLKNALSNQELKVDTINDSSSSEDEP
LMKRCKYSRNDEVNDIKENYDEFSIEEARNIFDKNKESDTRLKEEENEEG
IDNYEVPISNVVIEEEVDTSEPGDVIIESVDEFQPVFIQDLEEKEKKLDS
SSSFIVEEANHNLVEPNSSIIEEVMDESMDIPVLSIKEEDVIYKHDLDVD
EXSPNTIXATLSFTKGSGEKSSHLSXLSTNQLLPTIIELPTVPLPQSALP
PNVLNSSSNSVILQPNPMVSLPTEPLPPNSPAIISRISPASSRSPTPMLD
SRTSPLFEEEFITPMPNAKELRILDLDSNFFCGSSTTIKARSQASSTPPP
SLPSVIKTPTTTTTICTPILKRPKTPVTISCPIPSTIYTSANCKSRTHSG
NVNLERSYEICKAVVAKSVNRTQVEPKLGPPPQTSAPAMGKIVVRRTASP
VVSQSVGSGQTVIVRSLSGQNVSNQQMVLVSQNHTGQQILRPIRGVMRLP
VKTNQPNVAQMRPSPLFIQQPQQPRRDVLTLNQMVQGLPPNATVIQQGHG
GPTVIRIPVSSFQGNVAQPMIVKRLQSNAIVPQGSVVVSSSGGSPVVLPR
TLVSVAPTTRIVRPTQVITTSTSTPITFRHVSSKSPRFSGVRTPLPTTLS
LPTVPISVDEISNHIPPEQRALFQKPLPPPLKTIANRGTAGLTSGVNTPL
PQIQLPSEPVPITSPEILQFTSQQLQRSTPSPQLRLIPSSSSIIVPQERD
TTFDIEEGKDITSLLEEVNNSHITAEIPIRDYNSSIHGNGSNSQQPVVLH
LNEHPTVTGNEGKIVLVQSSNGQLLAVPANQLGQRIVGPPRASSAPPPAV
ASPPTLNRPSSVDASKFVFVQQNHQEKLIQSKVEHEMLPPSFPNKNISKP
PQQRIVTLGGNSGKPQTVTFKTVGVVPLIPKHTESSSKRTCNVKAMIICK
QCGAFCHNDCIGPSKVCVSCLIRIGGGERSGKTTDKMD

mRNA from alignment at LSalAtl2s1042:100504..106238+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000279-696126 ID=EMLSAT00000000279-696126|Name=EMLSAT00000000279|organism=Lepeophtheirus salmonis|type=mRNA|length=5735bp|location=Sequence derived from alignment at LSalAtl2s1042:100504..106238+ (Lepeophtheirus salmonis)
AGTTCTCTTGTCTATTTGGCTTTTTTCTTCATTTTGTAAATAAGAAAAAA
GAAGGAAGAAAGAGAGAGAGAGAGAGAGAAAGGAAGAAAGAGAGAAGAAA
AGAAACAGAGTGAAGAAAAGTAAGATTTTGACTCTGTTGGATAATTAAAG
TGTTTATAAGTGAATTCTAATAATTAAAATGTGGATGATTTAATGATGAT
TCGTAAACGGAAGAAGGATCCATGGAAGTCAATTACATGATGCGTGAATA
TGGAGTCGAAAACACTACGAACTCGTAAAAGGAATAAATCCTTGAAGGAA
TCAGCGAAATTAGTGGGTTTCTATTGATTGTTGTTGGTGTAATCCTTGTA
ATCCTTGGTTTATGCTCCGTTTTCCCTTACAGGTTCTGGAAAGCATTCCA
CAAATACCGATCCATGTGACTGAAATCAAGAAATTAATCCTCAAAGATCA
GCCTTCAGTGGAAACGAGGGAACTGAGGGACGGGAATCTCTTGTCCGTTC
TCACAAATGGCTCCACGGGGAGAAATCCCACCTTTTTCAAGGCCTTTGGT
CACGATGATGTCTTTGGTCTCAAATCTTGCATTCCTGAAGGAGGAACAAC
TCTGGAAGTGGTGGAAAAAGTGCCTTCTGGGGATGAAGGAGGAGTGTCTC
AAGAGGAAGGAGTTCTCTACGTTCAACTACCTGAAGGACATCCCATTATT
TCAAACTCTACTCCCGAACAAGAGGAAGACGACGAAGACGAAGAAGTCGA
ACAAGAGTCGTCCCCACCACCTGTTTCCTATAGGGATGAAGGCAACAGTC
AGGCTTCAACTTCACCTGACGGAGGAGAAAATGCTACTCAGCTCAAGGAC
ACTCAGACTAAATTGTCTATTGAGGAGGCTATTGAAAAGGCAGACATTAT
ATTTGAAGATATCTCTCTCAAGAATAAAGGACTCGCACTAGAGTCCAGTA
ATGAACACAAAAGTGATATACGATCAGAAAATAGTAAATCATCTCATAAT
TTAAGGCCTAAAAGGACTCTYCGTAGTGTTCACCCCATTACGACTACTTT
TTCCTCTAGTCAATCCTTAACTAAAAAAAAGAAGAAATTTTCTATTAGTT
CCAGTATTATACCAAACACAGGATCCGGAAATTATAAAAAGTCTTCAATC
ACTAGCAATGGAGGTATAGTTGTGTTGCAAAACTATAAAGTGAATTCAAT
TTTCATGACGTCAAAACAATTTAAACTTAATTTATTCTAGTTTCCACAAT
TATTATTTGCCACAAGCAATTTCTTGTTACATAACTTTCAACGTTCAATT
CACTGTTTCAGATTTACCCTGCATAATTATTGGGTTATTTTCATTTCTTT
TTTGTGTTTTTATAACGTGAAAACCAAAGCAATTTTTAATTTATTATTAT
TATTTTTTTTTAGATATTGAAATTCATTACAAACCTAATAGGAATGATCT
CTTAATGGCCCAAGCTACAACTATGAAAGAAGTTTTATCATCGATACATG
GTTTCTCCTTATCTAAAGTAAAAGCGGGCAATAAAAAGACTGGCAGTAAG
AAACTGTCAAATGTTGCATCAATTCAATTAGCTCGTGAGGGTTCTCTTGA
TTTTGAATCTCCGGAATCTATTCTTGGTCAAGTTAATCTTCGAACTCTCT
TGAACAAAGCCACATTTCTTAAACTTCCTCCAAGTTATCAGTACAAACTA
ATGCAGCTCCTCCCTCAAGTTGATTTTGTCAGAGAAGATTGTCCTAATCT
TGAGGAAACTATTAAGTAAGAGTCAGAGTTCACTTTTCTTGCTTATTGTT
ACGCTCCCTTTTTATTTAGATTAAGACAATCTGGTTTGAATAACGAATTC
TTTGCCAAAGCTAGCCAAGAATGGAGGGAGCGTTTGCACAAAGGTGATTT
TTCCTCAGATGTTGTCCAAAGAAATAAACAAGACATAGAAAAGGACAAAT
CTAAAATAGATCCATGGAAGGTAAATATAAATTGGAACATAATTTGTCGA
TTTTTATCAATTTTAAATGTATCACTTACAGTTCCGTAACTTCGAACCAA
TTTGGGGAATGACTAAAAATTTTGATTTAGAAGATTCTTTACCAGAAATA
GATATACCTTTGAAAAATGCATTATCAAATCAAGAACTGAAAGTAGATAC
TATTAATGATTCAAGCAGTAGTGAAGATGAACCATTAATGAAACGGTGTA
AATATTCCAGAAATGATGAAGTTAATGATATTAAGGAAAATTATGATGAA
TTTTCGATAGAAGAAGCGAGGAATATTTTTGACAAAAATAAGGAATCAGA
TACTAGATTGAAAGAAGAAGAAAATGAGGAGGGAATTGATAATTATGAGG
TACCGATCAGTAACGTAGTAATTGAAGAAGAAGTTGATACATCTGAGCCA
GGCGATGTTATAATTGAAAGTGTGGATGAGTTCCAGCCTGTTTTTATTCA
AGATTTAGAAGAAAAAGAAAAAAAACTAGATTCTTCATCTTCATTTATCG
TTGAAGAAGCTAATCATAATCTTGTTGAGCCAAATTCTTCCATCATTGAA
GAAGTTATGGACGAGTCCATGGATATTCCTGTTCTTTCTATAAAAGAAGA
AGACGTTATTTATAAACATGATTTAGATGTCGATGAACKCTCGCCCAACA
CTATARCAGCCACTCTTTCGTTTACCAAGGGAAGTGGGGAAAAATCTTCA
CACCTATCARCCCTTTCAACAAATCAACTTCTTCCTACAATAATAGAACT
ACCCACTGTTCCCCTACCACAAAGTGCTCTCCCTCCTAACGTGCTAAATT
CTTCATCAAATTCTGTGATATTACAACCTAATCCGATGGTGTCTCTTCCT
ACCGAACCTTTGCCACCTAATTCTCCTGCTATAATTTCCAGGATTTCTCC
AGCTTCGTCTCGATCTCCTACTCCAATGCTTGATAGTAGAACTAGCCCTT
TGTTTGAAGAGGAGTTCATTACTCCCATGCCAAATGCAAAAGAACTACGT
ATTCTTGATTTGGACAGTAATTTCTTTTGTGGTAGTTCAACTACAATTAA
AGCTCGTAGTCAGGCTTCATCTACTCCTCCCCCCTCTCTACCTTCAGTTA
TCAAGACTCCAACGACGACAACAACAATTTGCACTCCTATTCTTGTAAGT
ATTTTTTGTAAATAAAATATATTGCTCAAATTGATTAATGCATATTTATA
ACCATTCCCAAATACAGAAAAGACCGAAAACACCAGTTACAATATCTTGT
CCTATTCCGTCCACCATTTACACCTCAGCTAATTGTAAGAGTAGAACACA
TTCTGGAAATGTTAATCTGGAGCGTTCTTACGAAATTTGTAAAGCAGTTG
TTGCTAAATCTGTGAATAGAACTCAAGTTGAACCCAAACTAGGGCCTCCT
CCTCAAACATCAGCTCCTGCCATGGGCAAAATTGTTGTCCGGCGAACTGC
TTCCCCTGTTGTTTCACAATCAGTTGGAAGTGGACAGACCGTGATTGTAA
GAAGCCTTAGTGGTCAAAACGTTTCGAACCAACAGATGGTTTTAGTTAGT
CAAAATCACACAGGGCAGCAAATTCTTAGACCTATTCGTGGAGTTATGAG
GCTACCTGTTAAAACAAATCAGCCTAATGTAGCTCAAATGAGRCCATCGC
CTCTTTTTATTCAACAACCTCAACAACCACGGAGAGATGTATTAACGCTG
AACCAAATGGTACAAGGTCTTCCACCTAATGCGACTGTTATTCAGCAAGG
GCACGGAGGACCAACTGTTATTAGAATACCAGTTTCCTCATTCGTAAGTT
CGAAATAGTTTCTTTCTGATTATTATTTAAAATTGTAAATAATTTTTATG
TTAAATTCTCTTTTAGCAAGGAAATGTTGCACAACCGATGATTGTCAAAC
GGTTGCAATCAAATGCAATTGTTCCTCAAGGATCTGTAGTTGTTTCATCA
TCCGGTGGATCTCCAGTTGTTTTACCTCGAACTTTAGTTTCCGTAGCTCC
CACAACACGTATTGTTAGACCAACTCAGGTTATAACAACTTCTACTTCAA
CTCCTATAACTTTTCGACATGTTAGTAGTAAATCTCCACGATTTAGTGGT
GTGCGTACTCCATTACCAACCACTTTATCTTTACCTACGGTTCCAATTTC
CGTAGATGAAATCAGTAATCACATTCCTCCAGAACAGCGTGCTTTATTTC
AGAAACCATTGCCGCCCCCTTTAAAAACAATTGCTAATCGTGGGACGGCA
GGACTCACTTCAGGAGTTAATACTCCTCTGCCTCAAATACAGTTGCCTTC
AGAACCTGTTCCAATTACATCTCCTGAAATCTTACAATTTACATCTCAAC
AACTTCAGCGCTCAACTCCATCTCCTCAGCTTAGATTAATTCCTTCCTCG
TCTTCAATCATTGTTCCACAAGAACGAGACACAACTTTTGACATAGAGGA
AGGAAAAGATATCACCTCATTGTTGGAAGAAGTAAACAATAGTCATATTA
CAGCTGAAATTCCAATTAGGGATTATAACTCATCGATTCATGGAAATGGA
TCCAATTCCCAACAGCCAGTAGTGTTACATGTACGTATAATTCCTTATTT
AATGGTTATTACACAATTAGAATCCTTACCCTAAGCAAGTAAATATATGT
TTTGTCTTTTTTCTACTTCAATTTTAGTTAAATGAACATCCGACAGTTAC
TGGGAATGAAGGAAAGATAGTTTTGGTTCAAAGTTCAAATGGGCAACTTT
TAGCCGTTCCTGCAAATCAGTTAGGTCAACGTATAGTGGGACCTCCGAGA
GCATCAAGTGCTCCACCTCCTGCTGTTGCCTCACCCCCAACTCTCAACCG
ACCATCTAGCGTTGATGCATCTAAATTTGTCTTCGTGCAGCAAAATCATC
AGGAAAAACTAATTCAGTCCAAAGTAGAGCATGAAATGCTACCTCCATCA
TTTCCTAATAAAAACATTAGCAAACCACCTCAACAACGCATTGTGACCTT
AGGCGGAAACAGTGGAAAACCTCAAACGGTTACATTTAAGACAGTTGGAG
TTGTACCCTTGATTCCGAAACACACTGAATCCTCTTCTAAAAGGACTTGT
AATGTTAAAGCAATGATTATATGTAAACAGTGTGGTGCATTTTGTCATAA
TGACTGTATAGGACCCTCTAAAGTTTGTGTTTCTTGTTTGATTAGGTGAA
TTTTTTTTCTTATGGCTCCTCCCGGTATTATTCACATAAAGACTATATTG
TTTTATTAATTATTATTATTCATATTACTTTCTTCACAAATTGAATCTGG
ATTCCTTCATTCTTTGGACGTTAATATATATATACATATATATATTTTTC
TTAAACTAGTTGTTGTATTTTTTAAACAATATTAATATTATAATAATAAT
AATAATAATAATGATCTTCTATATAATCATAATCATTATTATTACCATTA
TTACTACATATATATTCATTATATTATCAGTATATGTATTCATTTTCTCT
CCCTAAATTGTAACTTGTACTTGTAAGTCATATTTTATAACTTTCTATTG
GTTTTAATGTATCACAATACAGGCGTTACTATGAGAAAGATAACTACTCA
ACATTTTAATCATTATATTTTGTTGAACAAACATGCACAGCACATGTCAC
ATTTTGTTATTGAAGTGATACATTTTACTTTTATAGGATCGGAGGTGGAG
AAAGGTCGGGAAAAACCACTGATAAAATGGATTAA

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