EMLSAT00000000282, EMLSAT00000000282-696129 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000282
Unique NameEMLSAT00000000282-696129
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1042supercontigLSalAtl2s1042:34410..35413 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000282 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000282EMLSAG00000000282-683048Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001296EMLSAE00000001296-710224Lepeophtheirus salmonisexon
EMLSAE00000001297EMLSAE00000001297-710225Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770040auto770040Lepeophtheirus salmonispolypeptide
EMLSAP00000000282EMLSAP00000000282Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000282

>EMLSAP00000000282 ID=EMLSAP00000000282|Name=EMLSAP00000000282|organism=Lepeophtheirus salmonis|type=polypeptide|length=130bp
MAVVILILVPILKIPMXLFSLIRSXRHSSPLSIVMSWTRMMLRIAVQGGE
GLKAQSPMLLLFXHLLVILQPLIQKERVDPCMISDLVIPKWMKLEDIPGK
SCLGSSYVQFLLCNYIFNHNNYSLLLISFW
back to top

mRNA from alignment at LSalAtl2s1042:34410..35413+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000282-696129 ID=EMLSAT00000000282-696129|Name=EMLSAT00000000282|organism=Lepeophtheirus salmonis|type=mRNA|length=1004bp|location=Sequence derived from alignment at LSalAtl2s1042:34410..35413+ (Lepeophtheirus salmonis)
ATGTCTCATGGCAGTAGTAATACTCATCTTAGTTCCAATTTTGAAGATCC
CTATGKCACTCTTCTCTCTCATCCGAAGTCRCCGCCACTCATCTCCACTA
TCCATAGTCATGAGTTGGACACGGATGATGCTCAGGATAGCAGTCCAGGG
GGGAGTTGTGGTGGGMCTTCCTTCTCCTTTCTTTTAATTATACATATATT
AATTCTTTCAATTAATTATTCAGAATGTTTGACTAACACTATTCTTTATT
ATAGGAGGGCTTGAAAGCTCAAAGTCCAATGCTGCTGCTCTTCCKCCATC
TTCTGGTAATTCTACAACCGCTAATACAGAAGGAAAGGGTGGATCCTTGC
ATGATCTCCGATCTCGTGATTCCAAAATGGATGAAGCTCGAGGACATTCC
AGGTAAATCATGTCTTGGGTCATCTTATGTCCAGTTCTTACTTTGCAATT
ACATTTTTAATCATAATAATTATTCATTGTTATTAATATCATTTTGGTGA
AGGCTTCAAAGGATACAGAATATATTGCCTACAATTTAATTTGTACATAG
AGTTGAGAGCAATCAAAGGGGGGTATTTAACTATTGAAACTTATTTTAAC
TAGAGAAAGAAGGAAGTAGTATGGATTACTTCCGGAAGTGGAAGAGTCAC
AGTCAATGGTGGATTAAAGTGGGGATTTATTGTTTTTAAATCATAATATG
TTATTTGATTTTCCGTTTTCTATGACTTCTTAGGGATCTGATCTCCTACT
ACTTAGAAATAATGCCATATGTATTAAATATTCATTGCAAAAGCGATACC
TACATACTGTAGCTACTAATAGTAGAGGTACATACCTCCTACTTTATTGC
AAAATATCGAATCTACCGGAAACACAGACTGAGTCAGGTAGTAGTCATCG
CAACAGCAAGGCGGCAGTGTATTCCTACAACCTACTCTGTTCTAAGTCAC
ACACAAAAATACAATTTATTTTACATACATAGGCTACATACAGTTATGCA
AAAG
back to top
Add to Basket