EMLSAT00000000289, EMLSAT00000000289-696136 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000289
Unique NameEMLSAT00000000289-696136
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1042supercontigLSalAtl2s1042:77984..78444 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000289 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000289EMLSAG00000000289-683055Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001328EMLSAE00000001328-710256Lepeophtheirus salmonisexon
EMLSAE00000001329EMLSAE00000001329-710257Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771537auto771537Lepeophtheirus salmonispolypeptide
EMLSAP00000000289EMLSAP00000000289Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000289

>EMLSAP00000000289 ID=EMLSAP00000000289|Name=EMLSAP00000000289|organism=Lepeophtheirus salmonis|type=polypeptide|length=94bp
VPNRGYKDKEASPWKFQYPPFSNTSLPPLKIRKPRPIRLXRHDEFLPHLI
QNFESIHDLNRLQLSGEKNPGGHIQKNIPTEPIPWKYVAPRIGF
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mRNA from alignment at LSalAtl2s1042:77984..78444+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000289-696136 ID=EMLSAT00000000289-696136|Name=EMLSAT00000000289|organism=Lepeophtheirus salmonis|type=mRNA|length=461bp|location=Sequence derived from alignment at LSalAtl2s1042:77984..78444+ (Lepeophtheirus salmonis)
GTACCCAATCGCGGATACAAAGACAAGGAAGCCTCACCATGGAAATTTCA
ATATCCACCTTTTTCTAATACATCACTACCACCTTTAAAAGTGAGTAAAT
TGTACGCCCTTGCGACATCAATCACATTATAACTACATCGCTTTACAGAT
AAGGAAACCCAGGCCCATTCGTCTTCKCCGCCATGATGAATTCCTCCCTC
ATCTCATTCAAAACTTTGAATCCATCCATGACTTGAATCGGCTACAACTC
TCAGGAGAAAAAAACCCGGGAGGTCATATCCAAAAAAACATTCCCACAGA
ACCCATTCCATGGAAATATGTTGCTCCTAGGATAGGATTTTAATATGAAA
AGACTTTGATGTGTACAATGCATAGAGAGCTACCATCTTATTGAGTTACT
TAACAGATGTAAATTATCATGAGATATGGAATTGAATTCTAAGTGTGTAG
TTCAGTAATTC
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