EMLSAT00000000290, EMLSAT00000000290-696137 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000290
Unique NameEMLSAT00000000290-696137
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1042supercontigLSalAtl2s1042:95472..98859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000290 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000290EMLSAG00000000290-683056Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001330EMLSAE00000001330-710258Lepeophtheirus salmonisexon
EMLSAE00000001331EMLSAE00000001331-710259Lepeophtheirus salmonisexon
EMLSAE00000001332EMLSAE00000001332-710260Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772002auto772002Lepeophtheirus salmonispolypeptide
EMLSAP00000000290EMLSAP00000000290Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000290

>EMLSAP00000000290 ID=EMLSAP00000000290|Name=EMLSAP00000000290|organism=Lepeophtheirus salmonis|type=polypeptide|length=660bp
MTSSSQQVEDPRFAELIRPIKDLTANFNIPLSQFLDMYYSDLRDGISGLS
STPMDSQSKVNFAQAGLLIQGTVSVYSRKVEFLWQNVLKMLEFLAQRQSV
QDEMEMGDCPSNTEEXGGSSKRKNKLLKKDSLLFHGDFLPLPCNFSPHTL
MKDSSLQNNHINFIAITPCQLIQKEGKETAPHHTRVNIYSKSTNETLGPK
DDFRVNSQYCSVTGVIGQGIVGPTNLPDLSISLCVEKNNDDLPSSPPLLE
EINEVHHFEGEFHSEEPDCIEPIEEDLPISEVHNNTDSLRRSKRQILKDS
IVEERDEKLSLTQIWAPLNPHEVSNQEKNVSKKRRTTLLSRRPKLAPEKS
TASLSKKTLSEYYNNIKCATHRPKREAIANIPPELTREAFEEEKRRKSMK
KKLKITEQCPEGQDDCDNQETDNSPDENDGDAAQDWNEGDAPDPHEHFPL
LQTPSSPSLVNEIRGQNSYEELVVKRVATYVAQSQNYIESTDLAKRVSSW
HEHIRPKLEAVESRGSFNIHSYGTKVIESFPNDDRKTSISFGSLVNDVET
EEISRYFLSCLMLANTSNLELESNGMNNLFLTLLTKKRHHEELMASQEEP
VLTKSSSRKRVMLNPSNTTVSESIHQEIMDELNELPDQGLSQKEVFVIPR
PVKLNKHVYQ
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mRNA from alignment at LSalAtl2s1042:95472..98859+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000290-696137 ID=EMLSAT00000000290-696137|Name=EMLSAT00000000290|organism=Lepeophtheirus salmonis|type=mRNA|length=3388bp|location=Sequence derived from alignment at LSalAtl2s1042:95472..98859+ (Lepeophtheirus salmonis)
CAATAATACAATGTATAAAATAGAAAAGACAGAGACTGAACGGCACATTG GCCATCATTGGACTTGACTGTAGTTTGTTGATATTTGATTATTTATTATT GTCTATTGAAACCAAGTTGAGTTGAGCTGAGCTAGAAACATCTTTAAAGT GGTGTAAATTGGGCGGGAAAGTAGGCAGTAAGTAATGTCATAATAATGAT TTAAAATGACTTCATCGTCTCAACAAGTGGAGGATCCGCGATTTGCGGAG CTTATCCGCCCCATCAAGGATCTCACGGCCAATTTCAACATACCTTTGAG CCAGTTCTTGGATATGTATTACTCGGATCTTCGGGATGGAATATCAGGAC TCTCCTCTACTCCCATGGATTCTCAAAGCAAGGTCAACTTTGCCCAGGCA GGCCTACTTATCCAGGGAACTGTCTCTGTTTACTCCAGAAAAGTGGAATT TCTGTGGCAGAATGTTCTGAAAATGCTGGAGTTTCTCGCTCAAAGACAGT CTGTTCAGGATGAAATGGAAATGGGTGACTGCCCTTCGAATACGGAAGAA GMCGGTGGGAGTTCAAAGAGAAAGAATAAACTACTCAAAAAAGACAGTTT ATTATTCCATGGAGACTTTTTACCTTTGCCTTGCAACTTTAGTCCACATA CCCTGATGAAGGACTCGAGTCTTCAAAATAACCATATCAACTTTATTGCT ATCACACCTTGTCAACTTATTCAGAAAGAGGGTAAAGAGACTGCCCCCCA TCATACACGCGTCAATATCTACTCAAAGTCTACAAATGAAACACTTGGCC CTAAAGATGACTTCAGAGTTAATTCTCAATACTGTTCTGTCACAGGTGTC ATTGGACAAGGAATTGTTGGTCCTACCAATCTACCTGATCTCTCTATTTC ATTATGTGTCGAAAAAAACAACGATGATCTTCCATCTTCCCCTCCTCTTT TAGAAGAAATCAATGAAGTGCATCATTTTGAGGGAGAATTCCATTCAGAA GAGCCCGATTGCATTGAACCCATTGAGGAGGATTTACCCATTAGTGAGGT GCATAACAATACAGACTCTCTTCGACGATCAAAACGCCAAATATTAAAAG ATTCTATAGTGGAAGAAAGAGACGAAAAACTTTCTTTGACACAGATATGG GCACCTCTGAATCCCCACGAAGTTTCTAATCAGGAAAAGAATGTCTCTAA AAAACGACGAACTACACTTTTGAGCCGTCGACCTAAACTGGCTCCTGAGA AAAGTACTGCTTCTTTGTCTAAAAAAACACTTAGTGAATATTATAATAAT ATTAAATGTGCTACTCATCGTCCAAAAAGAGAAGCTATTGTAAGATATAA TTGTTGGAAGATTTTAAATGTAGGTTCTAATATATATATATATTTCATGT TAAGGCAAATATTCCTCCTGAGCTCACACGAGAAGCATTTGAGGAAGAGA AAAGACGTAAGTCCATGAAGAAAAAATTGAAAATTACAGAACAATGTCCA GAGGGTCAAGATGATTGTGACAATCAAGAAACGGATAATTCACCTGATGA AAATGATGGAGATGCAGCCCAAGATTGGAATGAAGGGGATGCACCCGATC CTCATGAACATTTCCCATTATTACAAACCCCTTCTTCTCCTTCACTAGTT AATGAGATTCGTGGCCAAAATTCTTATGAAGAACTTGTTGTTAAGAGGGT AGCGACTTATGTTGCTCAATCACAGAATTACATCGAATCGACGGATTTGG CCAAGAGAGTTAGTTCTTGGCATGAACATATTCGCCCGAAGTTGGAAGCT GTAGAATCTCGAGGATCATTTAATATTCACTCTTACGGTACTAAAGTTAT AGAATCCTTTCCAAATGATGATAGGAAAACGTCCATATCATTTGGGTAAG TGTGTATTACTAATACTTATATAAGTATATCTATTTATTTTTTACCATTT CTCATTAGTTCACTTGTTAATGATGTTGAGACAGAAGAAATCTCGCGATA TTTTCTTTCATGTTTGATGTTGGCCAATACATCTAACTTAGAGTTAGAAT CCAATGGAATGAATAACTTATTTTTAACACTTTTGACGAAGAAAAGACAT CACGAAGAGCTCATGGCTTCCCAAGAGGAACCTGTTTTGACCAAATCATC AAGTCGTAAACGTGTTATGCTCAATCCGTCGAACACTACAGTTAGTGAGT CGATCCACCAAGAGATAATGGATGAACTGAATGAACTTCCTGATCAAGGG TTGTCCCAAAAAGAAGTATTTGTCATACCTAGACCTGTGAAACTAAATAA ACACGTCTACCAGTAATTATGATAAGTCGTCACTATGTACCTGAATTAAA AATAATAATAAATACGAAATACTTTGTATGAGCACTAAATATTTATATAT ATATATTTCTTTTCTTTTTTTTTGATATTGAAATAAAATATCACGTTATT AAAAAGCATACATAAGGTTTATTAACAATAACGAATTAAAGTTAAGCTAT AGGAAGGGTAAATGCCTAAATTAATACTGTCCAGGACCAGACAAGGACTT CTCCATGAATTTTCTTTTGGCAAAGAACGTCCACCATTTGGAAGGTTTAC CATCTGGGGTGTCGAAGACCCTCTCTACAACACGCTTGCCAGTTTCTTGT CGAAGTTGGAGGAAATATTGTCGCATGGAGTCCGCTTCTTTGGTAGTTGC AGGTTTGGCATATACTCCGTTAAGAGGGAATCCCGCTTCTCCTGGYATGT TGAACCGAGAAATGGCAAGGGAGTACATTTCTTGAGTGCCTTGAGCCTTG TCCGTACATTTTTGGAGGCGTTTGAGACACTCCGTGATGTAAAGGGTCAG ATAAATCATGACTCGATCCACTTCGGACCTAGAAAGAAGGACAATCTCAA TTTACACAGTCTCTAGTCACTTAGGGACATTTACTTAATCTCATAGTTCC GGAAGAACACGTTCGCTTTGAAGAAAAACAGGGTTTCATCTATGATGTCG GGTTCCTTGGAGGTTTTAGGTAGTGCTGGCGCTGGACCACGCTGATCCGT TTTAATTGGCATAAGACTCATATTCCCAATTTTATTGGGGCCTTCTTTAC ATTGAGAATGGTACGCAGGCATCTCGGAACGCAAGGTTTAGAATAGATTA GTTTTTACTTGATAGTCTTAACACTTAATTCTTCCTTTAGACGATATTTT CACTGACAAAGAGCTTAAGTTTATTCCGTTGTAGTATCGTATTATTATTA ATTAAGTAGGAGGCGTATGAGGTTCTATCAAGACAATCAATATAATAATA TGTATTATATATATTTCATTTTTGTGTAGTGGAGGCAGGGAACTATGGGG AGACTGAAATCAATTTTGACTGATACCTTTTATTCGCG
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