EMLSAT00000000292, EMLSAT00000000292-696139 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000292
Unique Name	EMLSAT00000000292-696139
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1044	supercontig	LSalAtl2s1044:11340..17740 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000292 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000292	EMLSAG00000000292-683058	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000001336	EMLSAE00000001336-710264	Lepeophtheirus salmonis	exon
EMLSAE00000001337	EMLSAE00000001337-710265	Lepeophtheirus salmonis	exon
EMLSAE00000001338	EMLSAE00000001338-710266	Lepeophtheirus salmonis	exon
EMLSAE00000001339	EMLSAE00000001339-710267	Lepeophtheirus salmonis	exon
EMLSAE00000001340	EMLSAE00000001340-710268	Lepeophtheirus salmonis	exon
EMLSAE00000001341	EMLSAE00000001341-710269	Lepeophtheirus salmonis	exon
EMLSAE00000001342	EMLSAE00000001342-710270	Lepeophtheirus salmonis	exon
EMLSAE00000001343	EMLSAE00000001343-710271	Lepeophtheirus salmonis	exon
EMLSAE00000001344	EMLSAE00000001344-710272	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto768980	auto768980	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000292	EMLSAP00000000292	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1044:11340..17740+

protein sequence of EMLSAP00000000292

>EMLSAP00000000292 ID=EMLSAP00000000292|Name=EMLSAP00000000292|organism=Lepeophtheirus salmonis|type=polypeptide|length=608bp
MRVVQIRTGRVLRLALWAFFILIFLGLIYSHFNLSSEIISREDFLNAKRN
ANLKPRYEAHKSYPEEIPRFLGIGNLGNYEKSNDRIVRPRNGPGEAGKXX
KLKASQRKEEDRLKSVYGFNQLVSDEISLNRTIPDIREKECAFWDYPTRL
PTASVILVLHNEGWSTLFRTINSVINGSPPQLLKEVVLVDDKSELEHLHE
QLDAEIQKPYYKGKVVVVRNEEREGLIRSRNNGALAAKGDVVIFLDAHCE
VNKNWLPPLLAPIHENRRTLSVPVIDGINWDDFSINSVYAEGSHSRGLFE
WGMLYKEGNLPIKESTKRRYHSEPYNSPTHAGGLFAIDREWFKELGWYDP
GLYIWGGENFELSFKTWMCGGRSVWVPCSRVAHVYRGHSCSSCHSGSLGN
KFGGQPTTMRNYKRVIETWFDDEYKESFYTREPMAKFVDMGDISEQLALK
KKLNCKSFDWFMKEVAYDVLEKYPKLPPNAKWGEFRNEATNLCLDTRGQH
PPEKTLASSCHGMGGNQMFRLNTEGQLTSGEWCQTADSSGSVSIQWCSFG
SVSGPWEFKENLRQIYHRTYKMCLALLPDSNSLVLRSCDKDNSHQKWSIK
TLKPYWSS

mRNA from alignment at LSalAtl2s1044:11340..17740+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000292-696139 ID=EMLSAT00000000292-696139|Name=EMLSAT00000000292|organism=Lepeophtheirus salmonis|type=mRNA|length=6401bp|location=Sequence derived from alignment at LSalAtl2s1044:11340..17740+ (Lepeophtheirus salmonis)
TTAAGGAGCTACGTGTAATGACTGTCCATGTATATTTAATTGACTGACAT
TTTGAGTTAAAGGTGTTTCATATTTTGTTGAGGATATTATTAATTAATAG
GCAGATTATGTGTCGATAATCATTGGGAGTAGGGAAGAGACTATTCATAT
AGTATATAGAAAGTGTTTAAGTGATAGGAAAAAGTAAGTAACAAATGGCT
TCAGTGATTGTATGAGTATATATAATACTGACAATGGGAGCAGGATATTG
GGAATTGAGTTGGATTCTATATTAATAATATTTATTGTGTAGTAATTAGT
AATTAGATTTCACTCGTCTAGCTAATTCTCTCTCTGTGTCTTTTTCTGTT
TGGTTGCCTCTCTTTCTTTATTTCCTTTCAATGAAGTGAAGCTGCCGCGA
GTGTTACTTATTAAATTTTCGATCGGCGCAGCCCTTTAATAAAAAAGTTA
AATTCCTTTAGCTCTGCTGAGTGCAGAAGCAGCTACAAGCAACTGAGCTG
TTGTAGTAATAGTAAGTAGTTAAATTGAACTCTCACTCTTTCTCTTTTAA
GAAGCGGTGTTTGACACGTCGTAGTCGTGTCTCTGGAGGACGAGGAGGAG
GATGAGAGTTGTTCAGATCAGGACAGGCCGTGTTCTCCGTTTGGCTCTAT
GGGCTTTTTTCATCCTCATCTTTTTGGGATTGATCTATAGTCACTTCAAT
TTGAGTTCGGAGATCATTTCTAGAGAAGATTTCCTCAATGCCAAGCGTAA
TGCCAATCTCAAGCCGCGGTACGAGGCTCATAAGTCATATCCTGAGGAAA
TCCCAAGGTTTCTAGGCATTGGAAACTTGGGCAATTACGAAAAGTCAAAC
GATAGGATCGTGAGGTGAGAGATCATGATTAAAATAATCATTGATTCATA
TTTATTTCATCCTTTATTAATCAGGCCACGAAATGGTCCTGGAGAGGCTG
GKAAGKCCCMTAAACTCAAGGCCTCACAACGGAAAGAAGAAGACCGTTTA
AAGAGTGTCTATGGATTTAATCAACTCGTCTCAGATGAAATCTCCTTGAA
TAGAACAATACCTGATATTCGGGAGAAGGAATGTGCCTTTTGGGACTATC
CAACTCGTTTGCCAACTGCTTCCGGTAACTCATTATCCATCAAATATAAT
GAGCAACACTTATGCCACTAATTAATTATCATTACTTTTCTTCATATCAT
TAGTCATTTTGGTACTACACAACGAGGGATGGAGCACTCTATTCAGAACG
ATTAATTCTGTCATTAATGGGTAAGGAATTCAGATATGATTTAGATAGAT
ATATAAATAGGAATAAACTATAATCCATTAATTAATTAATTCACAGCTCT
CCTCCACAATTACTAAAAGAAGTTGTACTCGTGGATGATAAGTCTGAGCT
GGAACATTTACATGAGCAATTGGATGCCGAGATTCAAAAGCCCTACTATA
AAGGAAAGGTCGTCGTCGTTCGAAATGAAGAAAGAGAAGGACTTATTCGG
AGTAGGAATAATGGGGCTTTGGCAGCTAAAGGAGATGTAGTTATCTTTTT
AGATGCGCATTGCGAAGTCAACAAAAATTGGTTGCCTCCTCTCCTTGCAC
CTATTCACGAAAACAGGTATGTACTTCATTAACTATCAATGATTTAGGCT
ATTATTATTATCATATTGATTGTAAGTATATCCATATAAATCAACGACTG
TATTTATTTGGATGTCATAAATTTATTTATAGAGCGGGAATCATTTTTCA
TTGCGACATTGATATCTAATTACATTTATTTTGAAATATTTTTTTAGGAG
AACACTCTCAGTACCAGTCATAGATGGCATCAATTGGGATGATTTCTCAA
TCAACTCTGTTTATGCTGAAGGCTCACACTCAAGAGGTCTTTTTGAATGG
GGCATGTTATATAAAGAAGGGAACTTACCCATCAAAGAGTCTACCAAAAG
ACGATACCATAGTGAGCCCTATAATTCACCAACTCATGCTGGAGGTTTAT
TCGCAATTGATAGAGAATGGTTCAAGGAACTAGGATGGTATGACCCAGGT
ATAAACGGTTATAATTAATATTTATTCGCAACTTGAAACAACTTTTGTAA
ACTGTCTCCTCCTTCTGTGTTTTTTTTTTAATTTTCAAAAACTGTTCATT
TTTTTAAATACTCCATGTACATCGAATCTTGTTGTTTTGATACCTCTTAT
GAATTTGATCATTAGGTTTATATATATGGGGTGGTGAAAATTTTGAACTC
TCATTTAAAACATGGATGTGCGGAGGAAGATCTGTTTGGGTTCCATGCTC
AAGAGTGGCGCATGTTTATAGAGGACATTCCTGTTCATCTTGTCACTCTG
GATCCCTAGGTAACAAATTTGGAGGGCAGCCTACTACTATGAGGAATTAT
AAGTAAACACCCTTTTTTTCTTATCCATCAAATTATATATTCTTTGTGAG
TCAAAAATGAACACTTGTGTCAATTTATAGACGTGTAATTGAAACTTGGT
TCGATGATGAATATAAGGAGTCCTTCTACACACGTGAGCCTATGGCCAAA
TTTGTGGATATGGGGGATATTTCTGAGCAGTTAGCTTTAAAGAAAAAACT
GAATTGTAAATCCTTTGATTGGTTTATGAAAGAGGTAGCCTATGATGTGC
TGGAAAAATATCCCAAACTTCCTCCAAATGCTAAATGGGGAGAATTTCGA
AATGAAGCCACGAATCTCTGTTTAGATACACGAGGACAGCATCCTCCAGA
GAAGGTACGTTATCACGACTACCTCTCATCATTCAAAGTTTTTATTTTTA
ATTGCTTAGACCCTTGCCTCTTCATGCCATGGAATGGGAGGAAATCAAAT
GTTTAGGCTCAATACAGAGGGACAATTAACGTCCGGAGAATGGTGCCAAA
CTGCAGATTCAAGTGGTTCTGTATCAATTCAATGGTGTTCATTCGGCTCA
GTGAGCGGACCATGGGAATTCAAAGAAAACCTTCGACAAATTTATCATAG
AACATATAAGATGTGTTTAGCTTTACTACCTGATAGCAATAGTCTCGTTT
TGCGATCGTGTGATAAGGATAATTCCCACCAAAAGTGGAGCATCAAAACG
CTCAAGCCTTATTGGTCGTCTTAAAACTCTGTAGTATGTAGACTCTAATC
ATTGATCTATTATGATTAGTTTAATTTTGCATTTGAAGCCACCTATCTGT
GATGTATTTCAATTTATTTTGTTATTTACGTATGTACTTACATCCATATT
CAATTTTTACCTCTATTTTTTAATGATTTTTATTTTGTTACCATTAATGT
AAAGTAATATAATACTATTATTGTTTGTTGTGAATTAATTATTGTGATGT
CGAGTATTAAGCTGTGAATCTAGCGTCAGGATATGAAAGTGCGTCTAAGT
GTGATCCAGGGCTTTCTATTATCTCTGAATGAATTATAAATACACCCGAT
AACATTTAACATCTAATTTTTGGATTGAATCATGATTTAAGGATTCCTTA
GTATGTAAGCTACTCATTTTTTAGCATCTTCATACTGTTGGAAATAGTTT
TTTTTTTAACCTGTATAATATCCTTTTACGATAGAATTTGTTGGAAAAAC
ATTTACTAAAAATGTTCCAGTCATTAAAGTAGTTAACTTATGATTAAGGA
TCAATAAATTGAAGAAAATAATGTGACTGTATCCTAAAATATTAATAGGA
CGAAAAGACACAGGTGTACAAATGTTTATCTTTCTATATGTATAGATCAA
ATGATATAGAACTAACATTGATGCGTTTACACACTTTATTATATACAAAT
AAAGCAAGACTTTTATAATACATGCTTACACACTTCTATGTAAATTCGTT
TAAATATTTATATAAAAAAATGTAAATTAACAAATTAGATATACACATTC
ACATAAATAATAAATTAACGAAGGACGTATAATTGTCGGATTATTTTCTA
ACGACATTCTAGTTCCATAGAAAACATGATTTCCTACATTTTCTTAGGGT
ATTGTTGTTTCAATGACTTATTTTCTCTATACATTATATTTATTAATGTA
AATCGATGTCAAAATGCAACAAATATGCTAATTGGATTCTCCCCATTCCT
TAGAATACATAATCTGCTCCAGCCATTTCAATGGCCCATCTAAACTTATC
CCTTTGAGTTTTGTTATACACTTTCTCAATGGGTACATCAAATTTCTTCG
ACCATGCGACGGATATACGTGGATCCAAATAATTCAACTTGGACGTACCT
AATGCGATTGTTTTATTTTCTTCTTTGTCTACAGCCTGCGTTTCCAATTT
ATCTAGTTGTTCGACAGTTCTCTCGAGAGCTTTTTTCTTTTTATCCATCA
CAACCTTTTCAGAGGTTGAGCCTCCGTTTTTGTAGGCTTTTTTGGCTTGT
TTTAAATCTTTTTCTGCTTTTTCAMCAGCCTCTCTTTTTGCTTTGATTTT
ATCTTGAAGATTTTGCATAGATTTATCGTGCGTCTTGGGGGCAGCTCTTT
GATGGTTACATAGAATAGCAACTTTTCTGTTGGCTCGATTATATGAAAGC
ATCTAAAATTGAAAGAAAAATTAATGATTGACAACACTTGATATACACAA
TGTTAGCAAACTATACTATTGAAAAAACTTAATTATATGGCTTGATGTTA
AGAAATTTCAGAATTCAATGGAAATTAACAAATACTTACTTTTGCTGGAA
CATTATCATCTGCCTCAGTCAATTCTTCTAATTGATCCTGCAGAGTGAAC
GATGCATTAAACGTACGAAATACTTTCGCAGTAAGTCCTTTCATCAATGA
ATTTAGATATTCATTTAATATTGTTGTATTGAGTCTATCAAAAAGATCGT
CTTCACCTCTCTTATTTTCCATAAAAAGTTGCACATTTTTAAAAACGCGT
TTCTCAACTGGTACAATGTTGTGATATCGAATCGAATCTTTACCCAGAAA
ATCGAATTCTACGCAATAATCTTTGCCTAATACCATAAATGTCAATATTT
TTAATCATTATCCACTTTTATTAAAATAATATAGATTATTACCGTCTTTA
ACTGTATGTAAAGTGATGTGCTCAACTCTCAAGGAACAGCAACCAACTGT
ATCAGCCTGATCTTCATCTTTTTCATTACCAGCTCTTAGAGCCAATTTGT
CAATAAAGTAGAGAGCAACTGACCTTTGACGGACTCTCATTTCTTTAGAC
TTAAAGTCCACTGTGTAATCGTCCCTTATCTTCTCAATCTTGGATTTTAA
TTCACGCGCTTTTTCATACTTTAACATATCCTTTTCCCCTTTTAATTTTG
AGGAAGGATTTAACATGACGTATTTGATTTGATTTTGAATATTTTCGGTC
CATGAAGCCAACCAAGTAACCTGAAACACAAAATAATTAATACACATTCT
AATACTCCTTTTGTGAATAAACAAATAGACATACAGTATTGTCATGTCGA
ACTTCTTTCCATCTGTGCCCTGGAGGAGGTTCAGGGAATTTAGAATCCTT
GGAGCAATTGATAATCACATCCTCCGGTACAACACGTCTTTTTAACATAC
CCTGTTTAGGATGCTCTCCACGTCCACGAAATAAACCCGGAGGCTCAATA
CGGAAATTACCGATTTTTTCATTGTGATTATCAATAACGCAGATTCCAAA
TTCATCTTGTATTGCTGCATTTTTTTCCTTCTCCGCCTTTTTTTCTTCCT
TGCTACGATTTTTACGTTCTTCCGATACCTTCTTGTAGTATGTATTGATT
TCTCTGAAGTCACACTTACTCAAATTAGTTATGATATCTCTTTCTTCTCT
TGTCATTACTTTACGCCAATCTTTAAAAAAATTTCGGTTGAACACTTCCT
TTTCTGTATATTCATGTTCAATCWTCCTTGCATAGAAYCCCGCCACTTCT
TCCGTCTCGGACGATAGCTTCATTTTTTTATCATTATAATAAAAGTGTAC
ACCCTTTGGCAAACGATCATAGTCGGGAGCGAAAAGTGGACCTAAATGAA
TTATTTTTGAATAAAAAAAATAGATAAGTTTAACTATATATATATAAATC
ATTACCTCTATGCTGCAAAAATTTCCACTTGGTTCCATCATCTACTTTCT
CTTCTTCCCACCATTTCCAAACTTCAACTTTATCTTCCTTTTTCTTACGG
CCTCCACTTTTAGTAGGACTTACTACTTCATGCTTTACTTTGTGATTTTT
CTTGCTGCTTTTTGACTTTTTGCTTACTTCAACTCGTTCAACTTTCTTTA
CTTTGGGTTTTTTCCTTTTCGAAAGTGGAACATCATCTTCAGAATCCTCA
TCTCTCGATTTCCTTTTCTTATTCTTAGATTTTTTGGCCTAAAGATTAGA
AAAAAAAAGATAAATACAGCAACTCAAATAAAAATGGTTAGCAAGTTTTA
A

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