EMLSAT00000000295, EMLSAT00000000295-696142 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000295
Unique NameEMLSAT00000000295-696142
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1044supercontigLSalAtl2s1044:21011..25112 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000295 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000295EMLSAG00000000295-683061Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001356EMLSAE00000001356-710284Lepeophtheirus salmonisexon
EMLSAE00000001357EMLSAE00000001357-710285Lepeophtheirus salmonisexon
EMLSAE00000001358EMLSAE00000001358-710286Lepeophtheirus salmonisexon
EMLSAE00000001359EMLSAE00000001359-710287Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769512auto769512Lepeophtheirus salmonispolypeptide
EMLSAP00000000295EMLSAP00000000295Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000295

>EMLSAP00000000295 ID=EMLSAP00000000295|Name=EMLSAP00000000295|organism=Lepeophtheirus salmonis|type=polypeptide|length=715bp
MFYRDQDAEVLVRSCNTTQCINPHHYNEHTTYVFLRTLGRRIANKRDTEG
SKVFLHVLLKKLNPREIKIMTKGFSGDRKDCFPVCAKSFPSRGEICVRQL
KEYVQHLLYKTFRFHHVEGELCLLSSDRCSLSRGKYRETLLCFNPWHFEF
FSFDAENRNKYRYSKSKEHICEPRLVVTLSFSKYMCRLCWTEVSDPCVTS
SFNDENDFENDIQFLNSEDRNPELTNYSSIPQASVQSSPVASNITDSQVV
ESISFSPVPLDPPIVNVIPEASEKKYIELKVPAVVAEYPLSETSEATKTF
SQSNTQSISDKSSETSLVIQKSNKTTKTASPVLREKSTRKRKIQAIFQCW
KCLFKFTTNSELENHPCSGSLRYDEDDEIEETAKEDNFQVKIEQLDHDYG
VSPPLKKKSKEDGNVLGNEVSIKEEVIDEEDYEKCMFDEKVEKSSAAVSE
KSSECISSLEPEVLASTIYTCQFCGFCNSDISALSVHTDKCKSLGLRPLP
GLSQEKAVSSASGGGSSCSEQCTESLSHPSCLDGKDCICPYCGVTFADLQ
ELRLHAMKVKCRSIQCGVCSKFYATTRTHQHHECDGLKFKESDGIIYFKI
NNLNSSSWLVDCGECGLTVPSRHVLLQHQSARVNSCDKCKTNFSSVCKFI
SHPCLKDDFGEEFNLKVLSSLKTGNNPSKKFIKVTDLNQTIKCGVCGKMF
INLTALEAHRSKAHI
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mRNA from alignment at LSalAtl2s1044:21011..25112+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000295-696142 ID=EMLSAT00000000295-696142|Name=EMLSAT00000000295|organism=Lepeophtheirus salmonis|type=mRNA|length=4102bp|location=Sequence derived from alignment at LSalAtl2s1044:21011..25112+ (Lepeophtheirus salmonis)
ATGAAGTGCATAATATTATTAAAATGAGATGGGATCGCAACGCTCGATTG ATCAACGGGTTTGCAGCTTGAAAGATATGTTAAGCGAGGACTATTTTGAA CCGTTGTATTACTAGCTTTATTACTTCGTTATTCTTTTTTTTCAAGAAGA AGCTGCTGAAAAAGGGATTTAGAGGGACTTGGCGCTTAATAATAAATTAG TACATACAACAAATACGCGGAATAATAATTATTTATTAATTACTGATAAC TTCTAGGGATGAGGATCCTCCTGGATTTAGAGGATCGTCCTTTCCTTTTA AAACAACTAAGCAAACTCTATCATGAACTCCCAACGGATCTCCGCTCACG CAAATCTCTTTTMCCCGCCTCAGAGCTTATTTTGGAGGCAACTGAATACA TTTCCTATTTGAAAAGCACGGTAATTAGTAAATGTCCAATCAATGATTCC TTCATGCTTTTTAATATATATTATTTGTATTTTCTTAGAAAGTGATAACC AAGGAGACGTGCCCATTTACATCCGAGGCTGAACAAATCCCAAAGGAAAT CACAGAGAAGTTTGCTGGAAACTATCCTTTCTTCTACGATGGACTCAAAA AACTCAAAACAATCGAGGAACTCAAAGTCCTTGCCAACTTAATGAAGGAC CCCCTCGTCTCTCCCCTCAAACTCCCTTGTTATCCCTTGGAACTCAACAC AGTCCCAAGGGCGCATATCATTGTATACAAAGCCTTTAGGTGAAATCTCA TCATTTTCCTTCATTCTCTTATTAACAATGTTTTATAGGGATCAAGATGC GGAAGTTTTGGTGCGCTCCTGTAATACAACCCAATGTATAAATCCTCATC ACTATAACGAACATACTACCTATGTGTTTCTTCGTACATTGGGGCGTCGA ATTGCCAATAAACGAGATACGGAGGGCTCAAAAGTCTTTCTACATGTACT ATTAAAAAAGTTAAATCCCCGTGAAATCAAAATTATGACAAAGGGATTCT CGGGTGATCGAAAAGACTGTTTCCCGGTTTGTGCCAAATCATTTCCTTCT CGTGGAGAAATCTGTGTTCGACAATTAAAGGAATATGTTCAGCACTTGCT CTACAAAACATTTCGTTTTCATCATGTTGAGGGTGAGTTATGTCTCCTAT CATCAGATCGATGTTCTCTCTCTCGAGGAAAATACAGAGAAACGCTTTTG TGCTTTAATCCCTGGCATTTTGAATTTTTTTCCTTTGATGCGGAAAACCG CAACAAGTATCGATATTCAAAGTCAAAAGAGCATATATGTGAGCCCAGAT TAGTTGTCACGCTTTCCTTCTCAAAATATATGTGTCGTCTATGTTGGACT GAAGTGTCGGATCCCTGTGTCACTTCTAGTTTTAATGATGAAAATGATTT CGAGAATGACATACAGTTCCTTAATTCTGAAGACAGAAATCCTGAATTGA CAAATTATTCCTCTATACCTCAAGCATCTGTACAATCATCGCCAGTTGCA AGTAATATTACTGATTCTCAAGTAGTTGAAAGCATTTCATTTTCGCCTGT GCCACTTGATCCTCCTATTGTTAATGTAATACCAGAAGCTTCAGAAAAAA AATATATAGAACTTAAAGTTCCTGCCGTAGTAGCTGAATATCCTCTATCC GAGACCAGTGAAGCAACCAAGACTTTTTCTCAGTCCAATACACAATCCAT CAGTGATAAATCTAGTGAAACAAGTTTAGTGATTCAAAAAAGTAATAAAA CGACCAAAACCGCATCTCCTGTGTTACGTGAAAAAAGTACTCGTAAGAGA AAAATCCAGGCTATTTTTCAATGTTGGAAATGTTTGTTTAAATTTACTAC GAATTCAGAGCTAGAGAACCATCCGTGCTCTGGAAGTCTAAGATATGATG AAGATGATGAAATTGAGGAAACTGCGAAAGAGGATAACTTTCAAGTCAAA ATTGAGCAATTAGACCATGACTATGGAGTTTCTCCACCTCTGAAGAAAAA GTCTAAAGAAGATGGCAACGTACTTGGAAATGAGGTTTCTATTAAAGAAG AAGTCATTGATGAAGAGGATTATGAAAAGTGTATGTTTGACGAAAAGGTC GAAAAGTCATCAGCTGCTGTATCAGAAAAGTCTAGTGAATGTATTTCATC CTTAGAACCAGAAGTATTAGCCAGTACTATTTATACTTGTCAATTTTGTG GATTTTGTAATTCTGATATATCTGCTCTAAGTGTTCATACAGACAAATGC AAAAGTCTTGGACTTAGACCTTTGCCTGGTCTTTCACAGGAAAAAGCTGT TTCCAGTGCTTCAGGTGGGGGTAGTAGTTGTAGTGAGCAATGTACTGAAA GTTTATCTCATCCTAGTTGTTTAGATGGCAAAGATTGCATTTGTCCGTAC TGTGGTGTTACTTTTGCCGACTTACAAGAACTCAGATTACATGCGATGAA GGTTAAGTGTCGTTCGATCCAATGTGGCGTGTGTAGCAAATTTTATGCCA CAACACGAACTCATCAACATCATGAATGTGATGGTCTTAAGTTTAAAGAA TCTGATGGAATCATTTATTTTAAGATTAATAATCTTAATTCTTCCAGTTG GGTAAGTTTAGACGCTATTTTTTTTTAATGCAGTATTTTGTTAAATAATT ATTATTCAAATAGTTGGTGGACTGTGGAGAATGTGGATTAACCGTTCCAT CAAGACATGTACTTCTCCAGCATCAGTCGGCTCGTGTAAACTCTTGTGAC AAATGCAAAACAAACTTTTCATCTGTTTGTAAATTCATCTCGCATCCCTG TCTTAAAGATGATTTTGGTGAGGAATTTAATCTAAAAGTATTGTCGTCCT TAAAAACAGGAAATAATCCCTCAAAAAAATTTATCAAAGTGACTGATTTA AACCAAACAATCAAATGTGGAGTTTGTGGAAAGATGTTCATAAATCTTAC TGCACTCGAGGCACATCGAAGCAAAGCTCATATTTAGGAATATTTCATAT TTATATTTTGTGATATTTAGATAATTATTTTTCTATTATATAAGAAATTA CCTATATAAATTATATTATATACATAACCATGTTAAATTTATTATTTATG TTATTCACTCAAGCATTATTAAATGAATTAATTATACATTTAAAATGATT TCTTTTTTGTTTCTTTCATCGCGCAAGAAAATAAAATATTCGATAAATTG TATCAATCATGTTCCTTTATTGGCTTTTATGCCTACCTTCCATTTCCTGT AACAAGGATCTAACTATAATACTTTTCCTCGAACTGGAAGAAATGTTCTG AATAACGTAGTCCTGAACCCAATCTGGATTATTCTTATACAGTATAATTA AAATAGTTTTTCCCTGTTTCTTCACTTTATTTTCCACATTCTGAATTGCA GAGACTCCAAACCGAGTTCCTCTTTTAACTAGCCTTGTAGGTAATAATTC CTTCCGCCCTTGCATTTGTAAATACCACAAAACTATCTTGGCTTTCATTT CATCGCATTTGGGGGGCAAATCCTTTCCTGTTGTGGCCTTCTCGCTTAAT GGTCTGAGAATCGTCTTTTGAAATTCATCTGACTTATGAAGGCTCTTAAT TCGAATAAGGTTTTGGATACTTCCTTCACTCAAAACTGAGATTTTTGTGT TGGTAACGTCTGAACTTTTTAAAATTAAATGAAATAAGGATTCTTCTGCT GAATAAATTAAATCATCCAAAGGTATTGAATACCTTGATGCGAAATCATT ATAAAGGAGCATCATCAAATTTATTCCATCCCTGAATATCTTAATCAACT AAAAAGAAGAAAACAATGTTATTTAATTATCAATAGATAATATAAATAAT AATTATTAATTGCTGGTTTACTAAATCTTTCAATAGTCTCATTAGTATGT CAGAGGTTGCCTTAAATACTTTTTTTGAAGAATGAGGAGAATGGTTATTA CGCAAGGATTTAAAACGTTTCAAAATTTCTTCAGAACCTTCCATTCTGAT TATTGCATGCTTATTGACAGATTTGGCTATTCTCTCTTGTCCATAAACAC TAATTGCCAAACTCAACTCCTTTGCAACTGAGTCATTGATTTTCAACTTT AC
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