EMLSAT00000000298, EMLSAT00000000298-696145 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000298
Unique NameEMLSAT00000000298-696145
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1044supercontigLSalAtl2s1044:30478..32926 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000298 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000298EMLSAG00000000298-683064Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001371EMLSAE00000001371-710299Lepeophtheirus salmonisexon
EMLSAE00000001372EMLSAE00000001372-710300Lepeophtheirus salmonisexon
EMLSAE00000001373EMLSAE00000001373-710301Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769895auto769895Lepeophtheirus salmonispolypeptide
EMLSAP00000000298EMLSAP00000000298Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000298

>EMLSAP00000000298 ID=EMLSAP00000000298|Name=EMLSAP00000000298|organism=Lepeophtheirus salmonis|type=polypeptide|length=401bp
MSFSVSRSLLSPLSNALFKRHNSSYMNFNDTQRMLMDTCRAFAESELMPK
AKLIDKEHRYPEECVKAMGELGLMAINTPEEYGGSGLGAMEYAIAMEEIS
RGCASNGVILSAHNSLYLDPINKNGTHEQKEKYVTPLTDGNQIGCFGLTE
PGNGSDAGAASTMAKLSDDGSSYILNGTKAWITNAPEAXCMVVFATTNIK
LKHKGITAFIVPKSIPGVSTGKKEXKLGIRGSSTSNVILEDAVVPKENVL
GGLGMGFKIAMQTLDGGRIGVAAQAQGIAQNALDTAVDYASKRQXFGVPI
AKLQMIQSKIADMAMRVEASRLLLYRAAAAKDAGMPYTKEAAMTKLFASE
TATWVAHQSIQVLGGMGFVTDMPSERNYRDARITEIYEGXXXXNSEDSDC
F
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mRNA from alignment at LSalAtl2s1044:30478..32926+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000298-696145 ID=EMLSAT00000000298-696145|Name=EMLSAT00000000298|organism=Lepeophtheirus salmonis|type=mRNA|length=2449bp|location=Sequence derived from alignment at LSalAtl2s1044:30478..32926+ (Lepeophtheirus salmonis)
TTGTAACATTTGAGTATGTCGGAAGATTTCAAAAAATACAAATTTATACC TAAGGCAAAAGACGTCACATTTATATAATATGTTTCAATCTTGAAATTTA TAAAAAAAATATTTCCTCTTAGCTTCTTGAGCAAGAAACATACTTAGAAG CGCCCTCTAAGTTGTTAACTTATTGAATTGACTTGACTCAAAAGCTAGGT TATCTTTGACAAGTGACAGGAGTGCATGTCCAGGAATCAATATGTCCTTC TCCGTTTCCAGATCCCTTTTGAGCCCTCTCTCCAATGCTCTCTTCAAGCG CCACAACTCCAGTTATATGAACTTCAATGATACGCAGCGGATGCTTATGG ATACATGTCGGGCCTTTGCAGAGTCGGAGCTTATGCCCAAGGTTAATTTC TTCTTTGTCCTCTATCTATACATACATCTTACACTTATTCCATTAGGCTA AATTAATTGATAAAGAGCATCGATACCCTGAAGAGTGCGTTAAGGCCATG GGAGAACTTGGACTCATGGCAATCAATACTCCTGAAGAATATGGGGGATC AGGTCTGGGTGCCATGGAATATGCTATTGCTATGGAAGAAATCTCTCGTG GATGTGCATCCAATGGAGTTATTCTATCCGCACACAACTCCCTCTATTTG GATCCTATCAACAAGAACGGAACTCACGAACAAAAGGAAAAATATGTTAC TCCTCTAACAGATGGAAATCAAATCGGTAAAAAAAGAAGAGTCTTTCTAT AACTTTTTATCTTATATAATATATTATCTAGGCTGCTTTGGTCTCACTGA ACCTGGTAATGGAAGCGATGCTGGAGCTGCATCCACCATGGCCAAACTAA GTGATGATGGCAGTTCCTACATTTTAAATGGAACCAAAGCATGGATCACT AATGCTCCCGAAGCCCWTTGCATGGTCGTCTTTGCTACCACTAACATTAA ATTAAAACACAAGGGTATCACTGCATTCATTGTTCCCAAGTCCATACCTG GTGTAAGCACTGGGAAAAAAGAAGWCAAACTTGGAATCAGGGGCTCATCT ACAAGTAATGTAATACTAGAGGATGCCGTTGTACCCAAAGAAAATGTTTT AGGGGGATTAGGAATGGGTTTTAAAATTGCCATGCAAACTCTTGATGGAG GACGTATTGGAGTTGCTGCTCAAGCGCAAGGCATAGCTCAAAATGCCTTA GATACAGCGGTGGACTATGCATCTAAAAGACAGNCATTCGGTGTACCCAT TGCCAAGCTTCAAATGATCCAATCTAAAATTGCAGATATGGCCATGCGTG TTGAAGCATCAAGGTTATTGCTTTATCGTGCAGCTGCAGCAAAGGATGCT GGGATGCCTTATACCAAAGAAGCTGCTATGACGAAGTTATTTGCTTCTGA AACAGCTACTTGGGTTGCACATCAAAGCATTCAAGTACTTGGGGGAATGG GATTTGTTACAGATATGCCTTCAGAACGTAATTACAGAGATGCAAGAATC ACGGAAATTTATGAAGGAANNNNNNNNNNAAATTCAGAGGATAGTGATTG CTTCTAACATAATGAAGGAATATGGACTATGAACCTTCAAATAAATTTAT TTTCAATTTCAATGCAATCATTTCTTTATAATTAAAATAATAGTTTTCCT ATTTTGAATCCTGATTACGGATTTTTCTAAATAAATATATATTTCTGACT GAATCTCTTTATTCGATGGACCTTATTTGAGTGAAACCCATAAAGTATAA TAGGTATAATTTTTAGATAGTGTTCAATTCTTTGATTTAAATTTGATATT CTAAAATCCTCAGATCTCAAACCACTCTTTCATATAGGTACACTTTTTAG GATTGATAGAACCAAGGGATTTTTTGCAGTCTTTAATAACAGGACAGATC CCACATGGTACTCTAACAAGGCCCGTAGGTGGTAGAAGGGATTCAGTTGC TCTATAATATTTTTTGGAATCCTCACTCGCAACGTTTTCTATTTTTCCAT CGTAGATAAGTGTGTCTAGAATCATTTCTATGTCGTTTAATTTGAGAGAG ATCTTTGAAATCCCCAATTCTGAGATGTACTTGAGAAGATCATCTGAGGA AGCACAGGAGGCGTGTTTCCCAGCAACAGGACCTGAAGGGCAATCTTTTG ATTTTTCTAGCTTAGTGTACAAATAACGAAAACATTGTTGATTGAGAATT TCCACAAACTCTGTTTCAAAGTCTTGATTGGAATACCAGGCTCCACCCGT GACAGATACATCCGGATCTAAGTCATAGAGCATGTACACTTTTTTCTTAG TCGCATTAACGGATTTGATTGCTTTGATCAATTTCTTCGTTTCCAGGGAT TTTAATACTTTATTTAGGGTCGTTTGTATGAGGTTGGATTTGAGGCGAAT ATCCCGAATCCATGTCCCTAAAAAAAAGAATAAATAAGTATAACAATAT
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