EMLSAT00000000300, EMLSAT00000000300-696147 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000300
Unique NameEMLSAT00000000300-696147
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1044supercontigLSalAtl2s1044:33440..34684 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000300 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000300EMLSAG00000000300-683066Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001376EMLSAE00000001376-710304Lepeophtheirus salmonisexon
EMLSAE00000001377EMLSAE00000001377-710305Lepeophtheirus salmonisexon
EMLSAE00000001378EMLSAE00000001378-710306Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770004auto770004Lepeophtheirus salmonispolypeptide
EMLSAP00000000300EMLSAP00000000300Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000300

>EMLSAP00000000300 ID=EMLSAP00000000300|Name=EMLSAP00000000300|organism=Lepeophtheirus salmonis|type=polypeptide|length=308bp
MNQDYSIIKINDEVGHGLVALRRFREGETILREKPLVSSQFSWNRQYGYA
ACAFCLTPLETAQENIFRLTDDPNILLPHTQCCETRSGFHSACPECNERY
CSTHCLEEDAKAQHALLCQNQPLMDLEELWKGMHYPPESCSITLMAKILA
RLCLHSDHFSHVLSRFCQDPIVGQEMTHKLLGQKYASQLECLREATLRVF
SSKPEVAPYLTSDGFIRLFALVARNGQVIEFPFNNFELVLNAKKDINEGE
EICISYLDECMLESSRHSRRKYLKENYMFLCKCIKCEAQINDPDVTSEEE
MSSDENEN
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mRNA from alignment at LSalAtl2s1044:33440..34684+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000300-696147 ID=EMLSAT00000000300-696147|Name=EMLSAT00000000300|organism=Lepeophtheirus salmonis|type=mRNA|length=1245bp|location=Sequence derived from alignment at LSalAtl2s1044:33440..34684+ (Lepeophtheirus salmonis)
GCACATGCCTTCGGTTTCTTCTACTCCAAGTGCTTTTGTTTTTCTCCAAC
ATCAATATGAACCAAGACTACTCTATTATTAAAATCAACGATGAAGTGGG
ACATGGACTCGTTGCATTGAGAAGATTTCGCGAAGGAGAAACGATTCTTC
GTGAGAAGCCTTTGGTTTCGAGCCAGTTTTCCTGGAATCGGCAGTACGGG
TATGCAGCATGTGCCTTTTGCCTTACTCCTCTCGAAACGGCTCAAGAAAA
CATCTTCCGACTCACAGATGACCCCAACATCCTTCTTCCGCATACGCAAT
GTTGTGAGACACGCTCTGGATTTCATTCTGCGTGTCCTGAGTGCAATGAA
CGATACTGCTCAACTCACTGTCTGGAGGAGGATGCAAAGGCACAACATGC
TCTTCTTTGTCAAAATCAACCTTTAATGTAGGTCCAACATTCCTCAAATA
ACTTCTATCACGTAACATTTGCATTATAGGGATCTGGAAGAACTTTGGAA
GGGGATGCATTATCCTCCCGAATCATGTTCCATTACCCTAATGGCCAAAA
TCCTTGCTCGCCTTTGTCTTCATTCAGATCATTTTTCCCATGTGCTATCC
AGATTTTGTCAAGATCCTATAGTAGGTCAAGAGATGACCCATAAACTACT
CGGACAAAAGTATGCTTCTCAATTGGAATGTCTGCGTGAAGCGACTCTTC
GAGTCTTTTCTTCCAAACCAGAAGTAGCTCCTTATCTAACGTCGGATGGC
TTCATCCGCCTTTTTGCTCTTGTGGCAAGAAATGGTCAGGGTATCGGTTC
CTCTCCCTTCGGTCGCTGGGTTAAAAATGTTGAAAAACTTCGCTTTCCAT
CTGAAAATGAAAAGGCGGGATTCGATAATCTCATTGAAAATATATTTACT
GTACTGGATAGAACCGTGGGCTTGGACTTCCTTAACAGTGAAGGCTCAGG
ACTCTATGAACTACAAAGTGCATCCAATCATAGCTGTGAACCTAACGCAG
TCATAGAGTTTCCTTTCAATAACTTTGAACTCGTACTCAATGCCAAAAAA
GACATCAACGAAGGGGAAGAGATCTGCATTTCTTATTTGGATGAGTGTAT
GTTGGAAAGTTCAAGACACTCGAGAAGAAAATACCTTAAAGAAAATTATA
TGTTCCTGTGCAAATGTATAAAGTGCGAAGCACAGATCAATGACCCTGAT
GTAACCAGCGAAGAAGAAATGTCAAGTGACGAAAACGAAAATTAA
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