EMLSAT00000000319, EMLSAT00000000319-696166 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000319
Unique NameEMLSAT00000000319-696166
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1049supercontigLSalAtl2s1049:45437..48451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000319 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000319EMLSAG00000000319-683085Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001477EMLSAE00000001477-710405Lepeophtheirus salmonisexon
EMLSAE00000001478EMLSAE00000001478-710406Lepeophtheirus salmonisexon
EMLSAE00000001479EMLSAE00000001479-710407Lepeophtheirus salmonisexon
EMLSAE00000001480EMLSAE00000001480-710408Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770491auto770491Lepeophtheirus salmonispolypeptide
EMLSAP00000000319EMLSAP00000000319Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000319

>EMLSAP00000000319 ID=EMLSAP00000000319|Name=EMLSAP00000000319|organism=Lepeophtheirus salmonis|type=polypeptide|length=178bp
MPKLRKTQRRQKYKFDMNRRRVNAKLNKHQKGRLKMHNPTIKEHWDNSIA
FTENIDNLGIVMKPNKAFPVISAKDALLKKKPKRSKKSSRGPKGAVTSLQ
EQMEKEMKECSKSHYRFSEDQLKFITHMLDKHGDDYEAMATDPMNHYQET
ANKIRRKIQNFIESPTYFAPYAKERGLI
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mRNA from alignment at LSalAtl2s1049:45437..48451+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000319-696166 ID=EMLSAT00000000319-696166|Name=EMLSAT00000000319|organism=Lepeophtheirus salmonis|type=mRNA|length=3015bp|location=Sequence derived from alignment at LSalAtl2s1049:45437..48451+ (Lepeophtheirus salmonis)
CGCATGTGTTCCCTTTTTATAAATGTAAATAAACAATTACGCAGTTTAAA
TTTGTATATATTCCAGCGTGATACGTTTTGACGGAAAAGTTTAAGAGATA
TCAGTTCTGTAAGACTTTTTTTAATTAGAGTATTTAAATAAATTATAATT
ATTGGTTAAATATATTCCCTTTCAGAGAGGATCATCATGCCCAAGCTACG
TAAGACTCAGAGGCGACAAAAGTACAAATTCGATATGAATCGAAGAAGAG
TCAATGCAAAGCTCAATAAACATCAAAAGGGGCGACTAAAAATGCATAAG
TGAGTAATTAATTACTAATTTATTAAAAATGAACGATATTAATGAAATGC
TCTTTTTTTTAAAATCATCCAGCCCGACTATAAAGGAGCATTGGGATAAT
TCCATAGCCTTTACGGAAAATATTGATAACTTAGGGATCGTAATGAAGCC
AAATAAGGCCTTTCCCGTCATTTCTGCTAAAGACGCACTCCTTAAAAAGA
AGCCTAAACGCTCAAAAAAGTCTTCCCGAGGTCCTAAAGGGGCAGTCACA
TCCCTTCAAGAGCAGATGGAGAAGGAAATGAAGGAGTGTAGTAAGAGTCA
TTATCGGTTCTCTGAAGATCAGCTTAAATTCATTACCCACATGCTGGATA
AACATGGAGATGATTATGAGGTAACTTTTGGAAGGGTTACTAATCCACTT
ATTTATTGTGTTTTGACACAAAAACAATCCTGAACTAAAATGTGCACTTG
GTAGAGGGCAAAACCAAAGTTATGGTCAATTATACATATTTTTGAGCACA
AAAATTGTCATTGGAAATCATTTCTCTACTAAATCATTTACTAACAAAAT
CAGAATATCTTCCCAAAACTTGTTTTATGTAATGGCAGTAACACCAAGCA
GGTTAAAAACCACCGCCAAGACTTCACAAAGCATTTAAGCTCCCTCCAAA
TACTTTAAATGTATCTCAGGTTTTTTGAGAGTGGATCTATATCCTTTGGG
AAATTTTAGAGGTATTTTTTTAKCCTGCTTGGTTGCCCTGCCGTAGTCTT
AACCAACCCATGGGCCTGGAGTTTATTTTGGAGCATTTGGAAGGAGTCTA
TACTGCCCTCAGTTTGTAAAAGCTATTTAGATGAACTAAGTAGTTCTGGA
AATCTAATCTGGGAAAACTCATTTATTCTGTGGATGCAAGGGTAAAAACT
GATAAACATACGGATAATAGGTTTTACAGCTAATATATACTTTGTCAAGA
AGCGGTACAGGTTTTTAACCTACTTGGTGTCTTTGTTGTTGCCTAATCAA
TCCATGAGCCCGGGGTTTTTATTCATAAAAGTTAGCCATAGTTGGTAGAA
AAATAGAAATGTAATCCAGGCTCCATTTTGAGAAAAATCCTTCGGGCGAC
TTTCCTGTTGACGGCCCACATATCAGACATCTTCTTGGACTATTAGAAAT
TGACAATAATTTGTCGACTAATACAAATGTAATCCAAGCTTAATTATATT
GAACATTCATTTTATTGATGCCCCTTATTATGACCCCGATATATACATTT
TCAAATAAAATCAATGATTTTTCACAACTTAAATTGTAATTTTCGGGCAT
CATAAGGATTAATCAGAATAATTTGTTGATAGAAATTAATCTAGACATTA
GAGAAAAATCACGATAGCTTGCTTTTGAGCTCACAAACTACATATGTCTA
TAATTTAATCATTAAGCATATATCTATGTACATATTAATTACATTTTTGG
AATCGAGTTTTTGATGCACTTTGCATTATAAGAATAAGAATATTTTCATT
CTTTTCCAAAATGTGATTATATTTAATTTTTATATTTATAAATATAATAT
CGTTATTTCTAGGCCATGGCCACGGATCCTATGAACCATTATCAAGAGAC
AGCCAACAAAATCCGTAGGAAAATACAAAATTTCATCGAATCTCCAACGT
ATTTTGCTCCTTATGCTAAGGAAAGGGGACTCATCTAAAGAAAATAATGA
TATTTTAAATAAACATATATTCCGACTCAACATTCAGCGCATTTTCTATA
TAAAAATTATTTGTTAAATACATTGATTTTACACCAAATCAATAGGAGTC
TTTATTAATCAGTGCAGTGCTGTGCTCCCAATCCACGACTGAAACATAAA
TACAAACCTAATTAAAATTATAAACCTGCAGAATTGTGACCACATCCATG
AAGTATTATTATGTTTAGTATTTGGCGCTATATTCTACATTATTGTGCTC
TACAATCGTTAATTTTTACTTATACACTCCAGACCAGGCATGTGGACTAC
CGTGTTTGCCATGTTTTCTTAGGACTTGGGCAAGTCTAAATTTAGTGGGA
GTTCCCAGGCCTTCCTTCTGTTTTGTTTATTATTCATAAAAGTTAATTAA
GCCCCTGTCAGATTGGCGCATGAGAGCTCGTCAAAAATTTCCTGGTAGAT
AAAAAAATACCATTGAAAGATATAATTATCAATGTCGAGAATGGACCTCG
ACTACGAGGATAAACAGCCTTTGACGCCATAAAAAAGTATCTTCCTATAT
ATTCCTCGGATTTTCGTGACCTTGCGTACACATAAGTGTCAATGCAATCG
TCACAAGGGAGCGTCGAACGATTGTTCTCTAATGTGAAATTCATTTTATG
TGACCAGAGGGTATCAATGAAGGAGGATCTTCTGAATGCAATCCTTTTCT
TGAGAGCGAAGTAGGATATGTACAAAAATGTTAAGCAATGAAGATAATAT
TATCTGTTGTTCTTATGAAAATCATGTCATAACTTAATAATACTTAAGTT
TCTATTACTCATATACGTTTGTGAATGGAACACTTTGCAGGGTATGAGTG
TTTTTCATCTTTTTGTCGTAGCATTCATCAATACTTGTATTGGGGGTTAC
AGATTTGGGCGTTGAGAGATATGAAGACAACGTTTCAACGTATTTGTCCT
TTTTATTGTGATTGTATTTCCCTGATTGCTTTTATCCCAATAAACATAAA
ATTTCAATTTGATAA
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