EMLSAT00000000334, EMLSAT00000000334-696181 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000334
Unique NameEMLSAT00000000334-696181
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:456867..457869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000334 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000334EMLSAG00000000334-683100Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001559EMLSAE00000001559-710487Lepeophtheirus salmonisexon
EMLSAE00000001560EMLSAE00000001560-710488Lepeophtheirus salmonisexon
EMLSAE00000001561EMLSAE00000001561-710489Lepeophtheirus salmonisexon
EMLSAE00000001562EMLSAE00000001562-710490Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777845auto777845Lepeophtheirus salmonispolypeptide
EMLSAP00000000334EMLSAP00000000334Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000334

>EMLSAP00000000334 ID=EMLSAP00000000334|Name=EMLSAP00000000334|organism=Lepeophtheirus salmonis|type=polypeptide|length=267bp
MFRNQYDSDVTTWSPQGRLFQVEYATEAVKQGSVIVGLKNKDQYAVLVSY
SRAPTDLSYPQKKVMTLDSHVGVAMAGLTADAKSLCRWMRTECNYSQHFK
DTPIRINVLMQELGHKMQLCIQGYNKRPYGVGFLVAGFDDMGPHIYQTCP
SANFYECKAMAIGARSQSARTYLERHMDSFPDCDLDALIKHGLLAARDTL
PNEVDLNRKNTSIAIVGKNKKFTVIENDAVDPYLANIEGERRGGGGGGAP
AVAPVEESGEGGAMDTD
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mRNA from alignment at LSalAtl2s104:456867..457869-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000334-696181 ID=EMLSAT00000000334-696181|Name=EMLSAT00000000334|organism=Lepeophtheirus salmonis|type=mRNA|length=1003bp|location=Sequence derived from alignment at LSalAtl2s104:456867..457869- (Lepeophtheirus salmonis)
ATGGTGAGACCTTTGAGTTGAAGGTGGTTTGAGAGGGGATTGTAGTCTAA
GTAAGGATGTGTGTTTGATCTCTTTCAGTTTCGGAATCAATATGACAGTG
ATGTAACAACCTGGAGCCCCCAAGGGCGATTGTTCCAGGTGGAGTATGCG
ACGGAGGCTGTGAAGCAAGGTTCTGTGATTGTGGGCCTCAAGAACAAGGA
CCAATATGCTGTTCTCGTGTCCTACTCGAGGGCTCCAACGGATTTGAGTT
ATCCTCAAAAGAAAGTAATGACGCTGGATAGTCACGTCGGMGTGGCGATG
GCGGGACTCACGGCCGACGCCAAAAGTCTTTGTCGGTGGATGAGGACGGA
ATGCAACTACTCGCAGCACTTCAAAGATACTCCCATTAGAATCAACGTTT
TGATGCAGGAGCTGGGACATAAAATGCAGCTCTGTATTCAAGTAAAATCT
CTCTTTTCATTTCACAGTGAATCCCTTAATCCATCCTTCTATTTCTATTC
ATTATTAGGGCTACAACAAACGTCCCTATGGAGTGGGCTTCTTGGTGGCC
GGCTTCGACGATATGGGACCTCATATCTACCAAACATGTCCCAGTGCCAA
CTTTTACGAATGTAAGGCCATGGCCATTGGCGCTCGTTCTCAATCCGCCC
GTACCTATCTTGAGAGACACATGGATTCATTCCCGGATTGCGATCTGGAT
GCGCTTATTAAACATGGCTTACTTGCTGCCAGAGATACACTCCCCAACGA
AGTGGACTTGAATCGAAAAGTATTTATTTTTTCAATCACTTTAGGTCTTT
ATAATGCGATCATTATTCTTATTTAGAATACCTCAATTGCCATCGTTGGT
AAAAATAAAAAGTTCACCGTCATAGAGAATGATGCTGTTGATCCTTACTT
GGCTAACATTGAAGGTGAACGACGTGGAGGTGGAGGAGGAGGTGCTCCTG
CTGTTGCTCCTGTTGAAGAATCCGGTGAAGGGGGAGCAATGGACACGGAT
TAA
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