EMLSAT00000000336, EMLSAT00000000336-696183 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000336
Unique NameEMLSAT00000000336-696183
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:462993..464207 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000336 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000336EMLSAG00000000336-683102Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001566EMLSAE00000001566-710494Lepeophtheirus salmonisexon
EMLSAE00000001567EMLSAE00000001567-710495Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777899auto777899Lepeophtheirus salmonispolypeptide
EMLSAP00000000336EMLSAP00000000336Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000336

>EMLSAP00000000336 ID=EMLSAP00000000336|Name=EMLSAP00000000336|organism=Lepeophtheirus salmonis|type=polypeptide|length=361bp
MGWMNPTRSEVVIRYSTPKGHVTMRMESAEASFGLSIPLEGLMGRVRKGQ
PLDGCTAIEEAPNRQEEDPLWFVILVRSSNCTFSEKVKAATKGNYSGAII
YNNNSDKVLHMGGTGSYLTPSVFIGLTDGEVILHKYLYYQSVNASVTLYP
DDPFDLNVYLLPFAIVIGICFLLMLGIVIFKCVQDHRRNRRHRLPKSALK
NLPIIRYNEESSPYDTCCICLDDYINNDKLRILPCDHAYHKNCIDPWLVK
NRRICPQCRKKVFCQGQEDTDEEETTTERDSLLSNVRSITINGDNESLGQ
TSSNDSSLEYQTPPEYQRPPTETTDVMHVAIVHSQDSSSSSSESENDGIS
RSRTTESEIVT
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mRNA from alignment at LSalAtl2s104:462993..464207+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000336-696183 ID=EMLSAT00000000336-696183|Name=EMLSAT00000000336|organism=Lepeophtheirus salmonis|type=mRNA|length=1215bp|location=Sequence derived from alignment at LSalAtl2s104:462993..464207+ (Lepeophtheirus salmonis)
ATGGGTTGGATGAACCCCACAAGATCCGAGGTAGTCATCCGATATTCCAC
TCCTAAAGGACATGTAACGATGAGAATGGAATCTGCAGAGGCCTCTTTTG
GACTCTCAATTCCTCTCGAAGGTCTTATGGGTCGTGTACGAAAGGGTCAA
CCTTTGGATGGTTGTACAGCTATAGAGGAAGCTCCAAACCGTCAAGAAGA
AGATCCTTTGTGGTTTGTCATCCTCGTGCGGAGTTCAAATTGTACATTTA
GCGAAAAAGTGAAAGCTGCTACTAAGGGAAACTACTCAGGAGCCATTATA
TATAACAACAACAGTGATAAAGTCCTTCATATGGGAGGTACAGGCTCTTA
TTTAACACCTTCCGTCTTTATTGGGCTCACTGATGGCGAAGTGATTCTGC
ATAAATATTTATACTATCAATCAGTGAATGCGAGTGTCACTCTTTACCCC
GATGACCCTTTCGATTTGAATGTGTATTTATTACCATTTGCTATTGTAAT
TGGAATATGCTTTTTATTGATGTTAGGAATTGTTATATTCAAGTGCGTTC
AAGATCATCGCCGAAATAGACGACATCGATTACCAAAAAGTGCTCTCAAA
AATCTTCCTATTATTAGATATAATGAAGAAAGTTCTCCATACGATACTTG
TTGTATATGTCTGGACGATTATATCAATAATGATAAACTACGTATTTTGC
CCTGTGATCATGCATATCATAAAAACTGTATTGATCCCTGGTTAGTTAAA
AATAGACGGATATGCCCCCAATGTAGAAAGAAAGTTTTCTGTCAAGGACA
GGAAGACACAGATGAGGAAGAAACTACTACGGAGAGAGATTCATTGCTAA
GTAATGTAAGATCCATTACTATTAACGGAGGTACTTTTCATGCTGGAGGA
ACATATGCGGCTGSTCTAGCAGAACAAGTCTCTCKTAACTCTCSGCGAAA
CTTTAGAACGAGATTCAATTTGTTTTCAAGATATCGGCGCTTAGAAGATA
ATTATTTAGACAACGAATCTTTGGGACAGACCTCTTCAAATGATTCATCT
CTTGAATATCAAACACCTCCTGAATATCAAAGACCTCCAACTGAGACAAC
AGATGTCATGCATGTTGCAATAGTTCATTCACAGGATTCTTCATCATCTT
CATCTGAGAGTGAAAATGACGGAATCAGTAGAAGTAGAACCACTGAAAGT
GAAATAGTTACATAA
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