EMLSAT00000000340, EMLSAT00000000340-696187 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000340
Unique NameEMLSAT00000000340-696187
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:644215..645528 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000340 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000340EMLSAG00000000340-683106Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001585EMLSAE00000001585-710513Lepeophtheirus salmonisexon
EMLSAE00000001586EMLSAE00000001586-710514Lepeophtheirus salmonisexon
EMLSAE00000001587EMLSAE00000001587-710515Lepeophtheirus salmonisexon
EMLSAE00000001588EMLSAE00000001588-710516Lepeophtheirus salmonisexon
EMLSAE00000001589EMLSAE00000001589-710517Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779083auto779083Lepeophtheirus salmonispolypeptide
EMLSAP00000000340EMLSAP00000000340Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000340

>EMLSAP00000000340 ID=EMLSAP00000000340|Name=EMLSAP00000000340|organism=Lepeophtheirus salmonis|type=polypeptide|length=318bp
MPNIKVFSGSSHPDLTQKLCDRLGIETGKVVTKKFSNLETCVEIGESVRG
EDXYIVQSGCGEVNDNLIELLIMINACKIASAERVTAVIPCFPYARQDKK
DKSRAPISAKLVANMLSVSGADHIITMDLHASQIQGFFDIPVDNLYAEPA
VLKWIKENIPEWRDAIIVSPDAGGAKRVTAIADRLNVDFALIHKERKKAN
EVASMVLVGDAKGRVAILVDDMAXXCGTMSHAAEKLMEAGATKIYAILTH
GIFSGPAINRINAACFEAVVVTNTIPQDKHMAECQKIQCIDVSMMFAEAV
RRTHNGESVSYLFSNVPY
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mRNA from alignment at LSalAtl2s104:644215..645528-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000340-696187 ID=EMLSAT00000000340-696187|Name=EMLSAT00000000340|organism=Lepeophtheirus salmonis|type=mRNA|length=1314bp|location=Sequence derived from alignment at LSalAtl2s104:644215..645528- (Lepeophtheirus salmonis)
ATGCCCAATATCAAAGTATTTTCAGGTAAAAACTTACTTTTGAGCTGACA
CGGAATATAATCCAGATCTAACCTCAATATTCTCCGTGACTCCCTAGGAT
CTTCCCATCCGGATCTCACGCAAAAGTTGTGTGACCGTCTTGGTATAGAG
ACAGGGAAGGTTGTCACTAAGAAATTCAGTAATTTGGAAACATGGTAAGG
TCCTCAATTGCTAAATAGATCACAAAAGGTGCATTTATGTCACTCACAGC
GTGGAAATCGGAGAGTCTGTTCGTGGAGAGGACGMCTATATCGTCCAATC
TGGTTGTGGAGAAGTAAACGACAACCTCATCGAACTTCTCATCATGATAA
ATGCATGTAAAATTGCATCTGCCGAACGTGTCACTGCTGTCATTCCCTGC
TTTCCATACGCGAGGCAGGATAAAAAAGACAAGAGTCGTGCTCCAATTAG
TGCAAAACTTGTAGCTAATATGCTCTCTGTCTCCGGTGCAGATCATATCA
TCACAATGGACCTTCATGCCTCACAAATACAGGGGTTCTTTGATATCCCC
GTTGATAACCTATATGCAGAGCCCGCTGTTCTTAAATGGATTAAGGAAAA
CATTCCAGAATGGAGAGATGCCATAATTGTTTCACCAGATGCAGGAGGAG
CTAAAAGGTACAATCAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATAGTGAATTCTATAGAATATCTGCAAGGAACGCATTTTGATGCA
TGTCTTATTTTAGGATTGATTGATTGATTCAACTCACTCCTTTTATTTTA
TGGTTTTTATCATTCAATTTACATATTTTTAGAGTTACAGCGATCGCAGA
TCGACTCAACGTAGACTTTGCATTAATTCACAAGGAACGAAAAAAAGCAA
ACGAGGTTGCAAGCATGGTATTGGTAGGGGATGCCAAAGGACGGGTGGCC
ATATTAGTTGATGATATGGCAGRTAMTTGTGGTACAATGTCACATGCAGC
AGAGAAATTAATGGAAGCTGGAGCTACGAAAATTTATGCTATTTTAACGC
ATGGAATTTTTTCTGGTCCAGCCATTAATCGAATCAATGCAGCTTGTTTT
GAAGCAGTTGTTGTGACTAACACCATTCCACAAGATAAACACATGGCGGA
ATGTCAAAAGATACAGGTTTGTTTGATAATTACTAATAAGTTCCTTGGAT
CAATATCATTTTTTTTTATAGTGTATCGATGTATCCATGATGTTTGCTGA
AGCAGTTCGTCGTACTCATAATGGCGAATCTGTATCCTATCTATTCTCTA
ATGTTCCATACTGA
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