EMLSAT00000000343, EMLSAT00000000343-696190 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000343
Unique NameEMLSAT00000000343-696190
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:671412..673075 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000343 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000343EMLSAG00000000343-683109Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001597EMLSAE00000001597-710525Lepeophtheirus salmonisexon
EMLSAE00000001598EMLSAE00000001598-710526Lepeophtheirus salmonisexon
EMLSAE00000001599EMLSAE00000001599-710527Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779254auto779254Lepeophtheirus salmonispolypeptide
EMLSAP00000000343EMLSAP00000000343Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000343

>EMLSAP00000000343 ID=EMLSAP00000000343|Name=EMLSAP00000000343|organism=Lepeophtheirus salmonis|type=polypeptide|length=409bp
MNHDRPSVLPRSCRERVQALSHYLSAKEDYDIVLLQEVWTDEDYKTLKKN
LILSGGPFKFSHYFDNGIIGTGTCIFSKSRIRFTTFHSFGLNGYPQSISH
GDWFAAKGLGIAVLYIDGFEIHVYVSHYHAEYNPENDIYLGHRVVHALES
AQWIQLTSASADLTIYAGDFNTEPDKVPLKLLKYITSLKDSWEEVHGSNA
NEEGATCETYYNSFTPESVKQACPEGKRIDYIMYQAGADTDVVTKDCILP
LSKRVPGKNYSYSDHEAVESTFRIRRKMDSNKCPLVDYKRSLSVKCQSER
FEVVTEALEIIHRSEGLVSYNGTKYLMIASGLLILLILSLLPSLIESSIQ
QYMDLAMFFPRLIVTIIMTFYLIMGFAFNRRELNELRSTKSSLKVIFDLD
KLCDESSKL
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mRNA from alignment at LSalAtl2s104:671412..673075-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000343-696190 ID=EMLSAT00000000343-696190|Name=EMLSAT00000000343|organism=Lepeophtheirus salmonis|type=mRNA|length=1664bp|location=Sequence derived from alignment at LSalAtl2s104:671412..673075- (Lepeophtheirus salmonis)
ATGAATCATGATCGCCCCTCTGTGCTACCTAGGAGCTGCCGAGGTAGTTG TACAGTATGACTCAAAAAGTAAACAACTTATGTATGTTTAGTAATACATA TGATTTCGGCAAGTATCTTAATAAATGATGAGAGGTGCTGAGCCCGAAGT ACTTCCTCTTGGCTTAGATAAATGACGATGAGCCGAACTTAGCGTTTGCA ATATGCATACACGTGTCGTATACGTACTTACTTATTGAGAGTATCCCGTC CGTTGAAAGAAAGAGAGAGTAAACACTAAACTTTAAAGTGAAAAAAAAGA AGTGGCTGSTTTATTTTYTGGATTCAGGRTGGRAGAGGRTTGGAAGGAAA TTAAAGWATTCAGTCTTAACTTTTTTGGTCTATATGGAATTTCTGCGAAA AGAAAAGAACGTGTGCAGGCACTCTCTCATTATCTGAGTGCGAAGGAAGA TTATGACATCGTCCTCCTTCAGGAAGTTTGGACGGATGAGGACTATAAAA CCCTTAAGAAGAATCTTATTCTTAGCGGAGGTCCCTTTAAGTTCTCTCAC TACTTTGATAATGGAATCATCGGAACAGGAACATGTATCTTCAGCAAGAG CCGTATTCGGTTCACTACCTTCCACAGCTTTGGATTAAATGGATATCCTC AATCTATAAGTCATGGAGATTGGTTTGCTGCCAAAGGATTAGGAATTGCT GTCTTATATATTGATGGCTTTGAGATTCATGTCTATGTGTCTCATTATCA TGCAGAGTATAATCCTGAAAATGACATTTACTTGGGTAAGGAATAAAACT TCATAAGTCATTTTCACAAATTGTATTGTATTTGAACTTAAATATTACTA TGCAGGACATCGAGTGGTACATGCATTAGAATCTGCTCAATGGATTCAAT TGACATCCGCTTCCGCAGATTTGACTATTTATGCTGGGGATTTTAATACA GAGCCCGACAAAGTTCCGTTAAAACTACTCAAGTATATAACTTCACTAAA AGATTCTTGGGAGGAAGTCCATGGTTCCAATGCGAATGAAGAAGGAGCTA CATGTGAGACTTACTACAACTCATTTACGCCAGAATCCGTTAAACAAGCT TGTCCTGAGGGGAAAAGGATCGATTATATTATGTATCAAGCTGGTGCAGA CACGGATGTGGTAACCAAGGATTGCATTTTACCTCTGAGCAAGAGAGTAC CTGGTAAAAATTACAGCTACTCGGATCATGAAGCCGTAGAGTCTACTTTT CGTATAAGACGTAAAATGGACAGTAACAAATGCCCTTTGGTTGATTATAA GCGTTCATTGAGTGTCAAATGCCAGTCAGAAAGGTTTGAAGTTGTGACTG AGGCTCTGGAAATTATTCATCGCAGTGAGGGGCTTGTATCATATAATGGA ACTAAATATTTGATGATTGCGTCTGGTTTATTGATTCTTCTGATACTTTC GTTATTGCCGTCCTTGATTGAGTCGTCAATTCAGCAATATATGGATTTGG CCATGTTTTTTCCCAGACTTATTGTTACTATAATCATGACGTTTTACTTG ATAATGGGATTTGCATTTAATAGAAGAGAGCTCAATGAACTGAGATCTAC CAAATCTTCTTTAAAAGTTATTTTCGATTTGGATAAGCTGTGTGATGAGT CTAGTAAATTATGA
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