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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1053 | supercontig | LSalAtl2s1053:94623..99252 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000364 >EMLSAP00000000364 ID=EMLSAP00000000364|Name=EMLSAP00000000364|organism=Lepeophtheirus salmonis|type=polypeptide|length=675bp
MCVSHFGWRLLLGILSFSQWAHGEIHVLLDSTKEAQLDWNRFPSSGTPGW
VEESYTDFDKSINWRCYVACDVGYPNVNNWLRTPLVRXRGVARLYIEIKF
SVRNCRLFPGEALQCKETFRLYASSSSSSSGGDSWDQADYTMLDRIAADE
GRITSNDEMIINTEVRSLDVSNMKRGLYFLFQDEGACLTLLAVKVYYLTC
PRVVLNLAQYPETPTGKGVASIERXQGKCVPHAVPKGDLFNLCQADGSWA
YSSGTCLCVEGYEAHNLTGLCAPCPIGKYKAGKGNVQTCTDCPARSKAIK
MGSGLCECDPGYYRGAEEPLSVPCRRPPGSPRDLKFKFLGPRTAVLNWNA
PLEERNKDTKYRAECYQGCADNSVHFDRKEIPFYETNVKVSDMDFGKTYI
FRIYAVNAVSNVSGRLDNYSEISIRTDDIDPLSKDADHTPNEEYISNNMN
INVDQVHSHKVVLSWNWPKKDEKEDFLLRYYEVKYFPRHSEHNNSQTIVT
RNKKAEIDRLKEASTYGFRVRVKSGDGNHHHWSRFSSPPVYQTTLDSFET
PIFVGEHHQSGSSGVVVDRSSVIIGSIXAVIVTLLLVALLFFFVRKGGSS
GWIKWLSSIKMTRYSENFASAGIKDMTEVAKITLAQLQQDLGITLVGHQK
KIMECWQRYKQLPFQNYLCFVVKGP back to topmRNA from alignment at LSalAtl2s1053:94623..99252+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000364-696211 ID=EMLSAT00000000364-696211|Name=EMLSAT00000000364|organism=Lepeophtheirus salmonis|type=mRNA|length=4630bp|location=Sequence derived from alignment at LSalAtl2s1053:94623..99252+ (Lepeophtheirus salmonis)
ATGTGTGTGTCCCATTTTGGATGGAGACTCCTTTTGGGGATACTGTCCTT
TTCCCAATGGGCCCATGGCGAGATTCACGTTCTCTTGGACTCCACCAAAG
AAGCCCAATTGGATTGGAATCGGTTCCCCTCATCTGGGACTCCGGGTTGG
GTGGAAGAGAGTTACACAGACTTTGACAAATCCATCAATTGGCGCTGTTA
TGTGGCCTGCGATGTGGGATACCCCAATGTGAACAACTGGCTTCGAACCC
CCTTGGTTCGGAGMCGCGGAGTGGCGCGCCTTTATATTGAAATCAAGTTC
TCTGTGCGGAATTGCCGCCTCTTCCCAGGAGAAGCGCTTCAATGCAAAGA
AACGTTCCGCCTCTACGCGTCCTCTTCTTCCTCCTCCTCGGGAGGCGACT
CGTGGGATCAAGCAGACTACACGATGCTGGATCGGATTGCAGCAGATGAA
GGCAGAATCACCTCCAACGACGAAATGATCATCAACACGGAAGTTCGCTC
CTTGGATGTCTCCAATATGAAGCGGGGCCTTTATTTTCTGTTCCAAGATG
AGGGTGCTTGCCTCACGCTGCTCGCCGTCAAGGTCTATTATCTCACGTGT
CCTCGAGTCGTTCTCAACCTGGCTCAATATCCCGAGACACCCACTGGAAA
AGGAGTGGCTTCCATTGAGAGGGMACAGGGMAAATGTGTACCTCATGCAG
TTCCTAAGGGAGATCTCTTTAATTTGTGCCAAGCGGATGGGTCTTGGGCG
TATTCATCGGGTACCTGTCTTTGTGTTGAGGGTTATGAAGCTCATAATTT
AACTGGGCTTTGTGCTCCTTGTCCCATTGGTAAATATAAAGCAGGAAAAG
GTAATGTTCAGACTTGCACAGACTGTCCTGCGAGAAGTAAAGCAATTAAA
ATGGGTTCTGGTTTGTGTGAGTGTGATCCTGGATACTATCGGGGAGCAGA
GGAACCTCTTTCTGTACCGTGTCGGAGACCACCTGGATCTCCAAGAGATC
TTAAGTTTAAGTTTCTTGGACCTCGTACTGCTGTTCTTAATTGGAATGCT
CCATTGGAAGAGCGCAATAAGGATACGAAATATCGAGCCGAGTGCTATCA
GGGATGTGCTGACAATAGTGTTCATTTTGACCGAAAAGAGATTCCCTTTT
ATGAAACTAACGTTAAAGTTAGTGATATGGACTTTGGGAAAACGTATATT
TTTAGGATTTATGCAGTAAATGCTGTATCCAATGTGTCAGGAAGATTGGA
TAACTATTCTGAAATATCGATTCGTACAGATGATATAGATCCCCTGAGCA
AGGATGCTGATCATACCCCAAACGAAGAATATATTTCTAATAATATGAAT
ATTAATGTTGATCAAGTTCACTCTCATAAAGTSGTGCTATCTTGGAATTG
GCCCAAGAAAGATGAGAAAGAAGATTTTTTGTTGCGTTATTATGAAGTGA
AGTATTTTCCGCGTCATTCAGAGCACAATAACTCCCAAACCATCGTGACA
AGAAATAAAAAGGCTGAAATTGATCGTCTAAAGGAGGCATCAACGTACGG
TTTTAGGGTACGTGTCAAATCGGGAGATGGAAATCATCATCATTGGAGTA
GATTCTCAAGTCCTCCAGTGTACCAAACAACTTTAGATAGTTTTGAAACA
CCTATATTTGTTGGTGAACATCATCAATCTGGGTCAAGTGGTGTTGTTGT
AGATCGTTCATCTGTTATCATTGGCTCTATTKCAGCCGTAATTGTGACCC
TTCTTCTTGTGGCGCTTCTTTTCTTCTTTGTAAGAAAGGGAGGATCATCA
GGATGGATAAGTAAGTCAGAAAAAGAATGTTGTGATAGTTTGGACTATCG
TGGAATAGATTCCCACTTTGGAAATAATGAATCTCATCCTATTGTTAACT
CTTCACAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTC
AAACTCTTACATCACCTATTTATAACCCCATTTCCACTCCATACAAAACG
TATGTCGATCCTCATACCTATGAAGACCCTCACTTTGCTGTAAAACAATT
TGCAAAAGAAATAGACTCGCGATTTATTACTATTGAGGCCATTATCGGAG
GRGGAGAGKTTGGGGATGTTTGTAGAGGAAGGCTTAGTCTTCCAGATAGG
AAGGATATGCTTGTTGCTATAAAAACGTTAAAACCTGGAAGCTCAGAAAA
GTGTAGAGCGGATTTCCTAACTGAAGCCAGTATTATGGGACAATTTGAAC
ATCCTAACGTCATTTTTCTACAAGGTGTTGTCACTAAAACTAATCCTATC
ATGATCATCACAGAGTTTATGGAAAATGGCTCACTAGATACGTTTTTAAG
GGCCAACGACGGAAAATTTCAGGTAATTAAAAAAAAAAAAAGTATTATTT
TTGGTTAGATTTTTCTCAAACCTGTCACCACCAATTTGAGTAATGAATAA
CATTTTACCAAATTTTTCTGATATGTTATAGTTAATTTTCCTATGATATC
CTTAGCTTAAATAACCAAAACTATGTAGTAAAATTTAATCCTTATTTGGT
CCTCTTATACACTGAATATTAAACTAAATTTATAAAAAAAGTATGAAAGG
ACAATGTACACCGCAAATGTGGCCCGTCAGAACAAAATCAAGCTAGAATG
ATTTTTCTCCCAATTTTGTGGTACATTTGTATTCTTCGACAATTTCTATG
AATAAATTATTCTAATTAATCCTTTGTAGGCTCCTCAAATTGCACTTAAA
GTAGCCCAATTTGATCGTCACAATAAAAGAATTAGAAATTCATAGGTTTT
ATTTGAAAGACGATATCGAGGACCATATAAGTCTCTAAAATCAAATAAAG
GCTCTAAATTATAACTCAGATTCTTGGTATCTTAACTCATCTCACAAAAT
TGAATACATACCCTATAATTGACTTAAATATATCTAAAGAAATATTGGGC
TATATATGAAGTCAAAAATTAATTGGGATTTTCTCATTTTAGTTAAAGAT
TATATTTTTTATTCAAATGATTTAATGTTCTAATGATTAAATCATTTATT
TTTTAGGTGGTGCAGCTAATTGGAATGATGAGGGGTATAGCTTATGGTAT
GCAATACTTATCAGAGATGAATTATGTTCACAGAGATTTAGCAGCTAGAA
ATGTTCTTGTGAACTCACAACTTGTTTGCAAAATTGCGGACTTTGGACKG
AGCCGCCAAATTGCAGATTCAAATGTAGATGGAGCATATACTACACGCGG
CGGTAAAATTCCTGTTCGATGGACTGCTCCAGAAGCCATTGCATTCCGTA
AATTTACTTCCTCTTCTGACGTTTGGAGTTTTGGTATTGTAATGTGGGAA
ATCATGAGCTATGGTGAACGCCCCTACTGGACATGGTCAAACCAAGACGT
GATCAAAGCCATAGAAAAAGGTTATAGGCTCCCCGCTCCCATGGACTGCC
CAGAAGCCAATCACCAATTAATGCTAGACTGCTGGCAAAAAGAAAGATCT
CATCGACCTTCCTTTGGTTCAATTGTTAAGACATTAGATAAACTAATATG
TTGTCCTGAGACTCTTCGTAAACTCGCTTCAGATCCTTTACAAAACATAT
ATGGCAGTAACGTGCCTGATTACTCCGCATTTAGAAGTATTGAAGAGTGG
CTTAGTTCCATAAAAATGACTCGTTACTCAGAAAATTTTGCCTCCGCTGG
AATCAAAGATATGACGGAAGTTGCCAAAATAACTTTAGCACAACTACAAC
AGGATTTGGGTATAACCCTAGTTGGACATCAGAAGAAAATAATGGGTAGT
ATTCATGCCATGAGGGCACAATCTTCACTCAATGTGTCTGAAGGCTTCCT
TGTATAGTTACTCTCTCTCTCTCTCTCCTTGATATTATAAATTATACATA
TATATCTATTTTATATATACCATGTATTAAGTTTTGAAAAAGAAATCTTA
AGATATTTATATATTCAATGTACATACAAACTGTGATCATATCAATACTT
TTCTCTGCTATTTTTCTTCCTCTTTTATTTAGTTACAATTTAATTTTGTT
CACTTGATAAATATATATATCTATATTTAAAAATATTAATACAACTATGT
CTGACATTAAGATAATATTTAGTTTTAAATATTGACAAAATAGGAGGCAT
TCAAATGTATGGATAATATCGGATATTTTTCATATTATTTAATATTTATT
TATATTTTTTTTTTTCCACGAGGAAATACCGTGGAAACAGACAAATAAGC
AAGCACACCTCCAATGTTATATCTATTTTTTTTTTAACTATGTGCATTTT
TAATTATTTTTCTGTCATTAAAGGTTAGGCAGCCATCAATGGGGGTTTTA
TTTGCCCCAAATTAGTAATTCAGAGTTGAACCTTTTAACAGAAGCACTCA
ATATTTAGATGAATTATATTTCTTTTTTTATTATGGAATGAAATACATTA
ATTGATTAAAAACGTGTATTGTTCCCTTTGTGATATTGTATTTATAGGTA
TATATATTAAAGAGTGCTGGCAACGCTACAAACAGCTACCATTCCAAAAC
TACCTCTGTTTCGTTGTTAAAGGACCTTGA back to top
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