EMLSAT00000000366, EMLSAT00000000366-696213 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000366
Unique NameEMLSAT00000000366-696213
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1053supercontigLSalAtl2s1053:57010..58418 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000366 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000366EMLSAG00000000366-683132Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001681EMLSAE00000001681-710609Lepeophtheirus salmonisexon
EMLSAE00000001682EMLSAE00000001682-710610Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770887auto770887Lepeophtheirus salmonispolypeptide
EMLSAP00000000366EMLSAP00000000366Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000366

>EMLSAP00000000366 ID=EMLSAP00000000366|Name=EMLSAP00000000366|organism=Lepeophtheirus salmonis|type=polypeptide|length=131bp
MRGIYIGIVLATCVYWSNAQQFAPAPINSQADCQCQCIALSFYDEYGQQQ
GNCRSTFNGAQWCYVENDGXSSCPXLKRSTRYRGKYYSNHACITLPAYSP
ECLGFVIYNEGNSGIQNSAPPIAVAGSRGTI
back to top

mRNA from alignment at LSalAtl2s1053:57010..58418-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000366-696213 ID=EMLSAT00000000366-696213|Name=EMLSAT00000000366|organism=Lepeophtheirus salmonis|type=mRNA|length=1409bp|location=Sequence derived from alignment at LSalAtl2s1053:57010..58418- (Lepeophtheirus salmonis)
ATGAGAGGAATATACATTGGAATCGTTTTAGCTACTTGTGTATATTGGTC
TAATGCACAACAATTTGCCCCAGCTCCAATTAATAGCCAAGCAGACTGTC
AATGCCAATGCATCGCACTCAGCTTCTACGACGAATACGGCCAGCAGCAA
GGAAATTGCAGGAGGTACAATCCTATTTTATAATTACCTATGCGTGATAT
TTAAGTTCACACGTAAGATTGTTTGTCAAACTTTACACACAACTAATTCC
TGGAAACAGACAGTGAGAACAAAATTAAGTTTATGTCCAGAAAATAATAA
CTGAAATCAACATTTTTCATTCAAGATGGGTGGAGGGATTGGACCCCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCC
CTATGTGATTTATTTTAGCACTTCATGTGTTTTAATATTATTTTCCTAAT
GTAGCACCCTCTKCCTTTTTGCACCCTATTCATTACAGGGGGGYCCTATG
CRRCCCCCCCCCCCCCTGMGACRCCKCTTCTAAATMTTCCKTGGAATAAT
AATTATTGTTATATTTTTTATATATAGCACGTTCAACGGAGCTCAATGGT
GTTATGTTGAGAATGATGGCTAKAGTTCGTGCCCCGKTCTTAAACGTTCT
ACACGGTATCGAGGAAAATACTACTCTAATCATGCTTGTATTACCCTTCC
TGCATACTCGCCGGAATGTCTTGGTTTTGTTATATACAATGAAGGTAATT
CTGGAATACAAAATAGTGCTCCACCAATAGCTGTGGCAGGATCAAGGGGT
ACCATATAA
back to top
Add to Basket