EMLSAT00000000373, EMLSAT00000000373-696220 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000373
Unique NameEMLSAT00000000373-696220
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1056supercontigLSalAtl2s1056:375758..377626 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000373 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000373EMLSAG00000000373-683139Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001706EMLSAE00000001706-710634Lepeophtheirus salmonisexon
EMLSAE00000001707EMLSAE00000001707-710635Lepeophtheirus salmonisexon
EMLSAE00000001708EMLSAE00000001708-710636Lepeophtheirus salmonisexon
EMLSAE00000001709EMLSAE00000001709-710637Lepeophtheirus salmonisexon
EMLSAE00000001710EMLSAE00000001710-710638Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777017auto777017Lepeophtheirus salmonispolypeptide
EMLSAP00000000373EMLSAP00000000373Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000373

>EMLSAP00000000373 ID=EMLSAP00000000373|Name=EMLSAP00000000373|organism=Lepeophtheirus salmonis|type=polypeptide|length=217bp
MSELSAIGDYFATAMNKAIKSVFIVTFKMASFYGLNSYIIQREYCYGSVV
PVAGQFLVAIPAVLALWFSKGRIDSAICLVHCHLAPMCLVDVSIFAEVKR
GIHPWITGFSIGGGIYCFRVHGAIYGPFIVCAVYVVLTVYTGFMAIDHPA
ENIASTTFKNFKFQTVGHYTVEKLGQTTVLGPVSEVPGYGAKNELSIKYW
IQRKNNKKCHKNDAFCL
back to top

mRNA from alignment at LSalAtl2s1056:375758..377626-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000373-696220 ID=EMLSAT00000000373-696220|Name=EMLSAT00000000373|organism=Lepeophtheirus salmonis|type=mRNA|length=1869bp|location=Sequence derived from alignment at LSalAtl2s1056:375758..377626- (Lepeophtheirus salmonis)
ATGTCTGAACTTAGTGCTATTGGAGATTACTTTGCTACTGCTATGAACAA GGCAATAAAAAGTGTTTTCATAGTAACCTTCAAAATGGCTTCCTTCTATG GCCTTAACTCATACATTATTCAGCGCGAGTATTGTTATGGTTCCGGTACT TGCAGCATATTTTTTTGGTAGTTGTACCTGTTGCTGGTCAATTTCTTGTT GCAATTCCAGCAGTTCTTGCACTTTGGTTTTCCAAGGGTCGTATCGACTC AGCAATATGCCTAGTACATTGCCATTTGGCTCCCATGTGTTTAGTAGATG TATCCATTTTTGCTGAAGTTAAAAGAGGTATTCATCCTTGGATTACTGGT TTCAGTATCGGGGGTGGTATTTATTGTTTCAGGGTTCATGGAGCTATTTA TGGACCATTCATAGTTTGTGCGGTGTATGTGGTCCTTACAGTTTATACTG GATTTATGGCAATAGATCATCCTGCTGAAAATATCGCATCTACGACATTT AAGAATTTCAAATTTCAAACGGTCGGACACTATACTGTGGAGAAATTGGG TCAAACGTTAGCCAAAACATTAAGAAAATTTTCTTTTCTTGATATACAGG GAAACAAACTATTAAAAATTGCGTTAATTAATCATAACAACATTAAATTT GGATATCATAAAGATATAATTTGTGACTATTATTGTTGAAATATTAAACA ACATCATTTTTTATAAAAACTTGTATCAAAGAATAATTACTTTAAACGAA CTTATGGTACTAAAAATATAGTCAATAACGTTGATGAGATTGAGTGTGAT ATATGAGATAACAGCTGATATTACATTTGTATACCTTAAATTGAAAGAAG GGAAATAGACAAAGCAAACAAACAACTTAAATGTGAACAAATTAATCAAA CCTTGACTAAAAATTGTAGAATTTCAGATTAGTTCCAAGAAAAAATATTT TTGCAAAAACAAATTGCAATTATTCTAAATATTGTTTCGAAAAAATATGA ATGGTTTTTCTAGCATTAATATCTATTTATTAAAATTGGGATACAGAAAA TCTTAGTTTACTAACTAAGGTTAAAAATAATCGGTTATATCTGAGTCAAT TACACATGTATACTTAATTCTAAAAAAAATACACAGCCCAATCTCTTTTT TTAGTGGAACACATTAATTGGCAAACAATAGAATATCAACACAACTAAAT AAATATATTATCTGTAAGTTGAGATAGGACGGTTCTTGGACCCGTATCTG AAGTACCCGGGTACGGTATAAATAAACTTGTATTATCCGAAAAGTTTTGA GATCCGAAACGGATTCGAGCACTCGAACTATAAAGGAACATAAAAAAGAT ACAAAGGATTTTTTGGATGTAAAAATACCTAAAGTATCTTAAATACTTAA TCCTAGTTAAAAAAATGATGGATTTTGGGGACTAATATAAGGGGGCTAAT ACTTTACCTAAACACAAAAACTGTTTTTTTTATAGCTCAATGGGCATAAA TAGGGGGTTAAGTGGTAAATCAAAAAATTACTGCCATCTCAACAGCTATA CGAATAACTACGTTTTTTAAACTTATTCAAAATCAAAAAAGTTATGAGCA AAAAAAAGAAATCAGTAAAAATTGCAATTTATTTTTATTTTAGGAGCAAA GAATGAACTTTCAATTAAATATTGGATTCAGAGAAAAAATAACGTTTGTA GAAATTTGCCTAGAGATTCGTTTGCAAATATATATTTGACTCATAAAAAT TGTTGTTTGACTGAAATATCTTTCCTTTTCAATTTTTTTATTTCTTTTTT TTTCTCCTTTTTTATCAAATTTCAATTTTTTAGAAGAAATGCCACAAAAA CGATGCATTTTGTTTATAA
back to top
Add to Basket