EMLSAT00000000374, EMLSAT00000000374-696221 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000374
Unique NameEMLSAT00000000374-696221
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1057supercontigLSalAtl2s1057:52882..55452 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000374 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000374EMLSAG00000000374-683140Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001711EMLSAE00000001711-710639Lepeophtheirus salmonisexon
EMLSAE00000001712EMLSAE00000001712-710640Lepeophtheirus salmonisexon
EMLSAE00000001713EMLSAE00000001713-710641Lepeophtheirus salmonisexon
EMLSAE00000001714EMLSAE00000001714-710642Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770757auto770757Lepeophtheirus salmonispolypeptide
EMLSAP00000000374EMLSAP00000000374Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000374

>EMLSAP00000000374 ID=EMLSAP00000000374|Name=EMLSAP00000000374|organism=Lepeophtheirus salmonis|type=polypeptide|length=750bp
MPSLIDLAHSVESNNLYGRPFEFDPKSQGPHKRRNCTDTCCFLLFFIAVS
CWIAIGVFGVIYGDPERIFHPINSFGRQCGRGRNSNRKYLFHFDFTRCLN
SKVITYGCPSRQICVKQCPLYSYSVFNDLETMTDIGVKTHFKKFCAPMSN
KQWETLSAPSLTEQEFCPSWTVPSYHFFKVCLPRFNDSSIDKLKSQIVVS
SSIEQIQINGDDLIKSVSSFGSYISSKFFVERFFNDLYAVWTLVLGAFLF
TGVISFLWIIMLRFFAKVLIWASLILLVVLIATVLTLNAIKVKWSYQNQA
NSATIFKIVYTQDYLQRIFSLTWIWIFVMSILCILLLLVIVXAYTLRKKL
KLAIKFIEIIGKAVHQMFLTSIYPVLPIAFQIGIIFWFGLIIVTWCSMSL
PSFKVLSTEFNMKSSIPSCKCENPDTNIGFQPGDKCNPKAFDLKCKRLCP
ELLCQFTEFQISIQLLMVYCYNIFLLYWCTNFCMGHSQMVLSGVFSKWYW
TWDKESAPNTQLFLSLYQVNIFHCGTLAFGSLFITPLRLPRLLIRFMVGS
ARNSSLVIRRIFEFLCRCCFECFEVFLKYITRNAYIVCAVRSTNLLTSGN
EAYNLIIRNEGRATISNTTVDFALFSVKLAIVSFVTFSSFWILRIWYDYH
GLMPLVFISVGSYLICSYFFGIYSTAMDTIFLCFLEDLERNNGSKAKPYY
MPIKLRKVMRKMTKINKKSRTQLSELQEIRNSNVHNDNDETKTKENRNSP
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mRNA from alignment at LSalAtl2s1057:52882..55452-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000374-696221 ID=EMLSAT00000000374-696221|Name=EMLSAT00000000374|organism=Lepeophtheirus salmonis|type=mRNA|length=2571bp|location=Sequence derived from alignment at LSalAtl2s1057:52882..55452- (Lepeophtheirus salmonis)
ATGCCAAGTTTAATTGATTTAGCTCATTCAGTTGAATCGAATAACTTATA
TGGGCGACCTTTCGAGTTTGATCCAAAATCCCAAGGACCTCATAAACGAA
GGAATTGTACCGATACATGTTGCTTCCTTTTATTTTTCATTGCTGTTTCA
TGCTGGATTGCAATTGGAGTATTTGGAGTAATATATGGTGATCCAGAGCG
GGTGAGTTTTATTAACTTTATAGATAGAGAGCATTCAATGTAAAATAGCG
GATGGTTTGTTTTTTTTTTCAGATATTTCACCCGATAAATAGTTTTGGAA
GGCAATGCGGCCGAGGAAGAAATTCAAATCGTAAATACCTGTTTCATTTT
GACTTTACAAGATGTTTAAACTCAAAGGTTATTACATATGGATGTCCATC
AAGGCAAATATGTGTCAAGCAATGTCCCTTGTATTCTTATTCCGTTTTTA
ATGATCTAGAAACAATGACGGATATTGGTGTAAAAACACATTTTAAAAAA
TTTTGTGCTCCAATGTCAAATAAACAATGGGAGACTCTATCAGCTCCAAG
TTTAACTGAACAAGAATTCTGCCCTTCATGGACAGTACCAAGCTATCATT
TTTTCAAAGTATGTCTACCACGTTTTAATGATTCTAGCATCGACAAATTG
AAGAGTCAAATAGTTGTATCTTCTTCAATAGAACAAATTCAAATTAATGG
AGACGACTTAATAAAATCTGTTTCTTCATTTGGATCATATATTTCCTCCA
AGTTTTTTGTGGAGAGATTCTTCAATGATCTCTATGCAGTCTGGACTTTA
GTACTCGGAGCATTTTTGTTCACAGGAGTAATAAGTTTCTTATGGATCAT
TATGTTACGTTTCTTCGCTAAAGTATTGATTTGGGCAAGCTTAAGTACGT
AGTTTTTAAAATATATATTTTTCATCTGACAAATATTAATATCTTATACG
TATTTTGATTTTAAGGGTAAATGAATGAATATTTTTAATGATGCTTTATT
TTAACAACTAGTTTTTTTTTTTTTGTATGTTTTTGTTTGTTTCAACATTG
GTTTTAGAGAACACTTTTTTTATTTATTTCAGTACTGCTTGTGGTTTTAA
TAGCGACAGTTTTAACACTAAATGCTATTAAGGTAAAATGGAGTTATCAA
AATCAAGCTAATTCTGCAACTATTTTCAAAATTGTATATACTCAAGACTA
TCTGCAACGAATTTTTTCTTTAACTTGGATATGGATTTTTGTGATGTCTA
TCTTGTGCATTTTATTGCTACTTGTTATAGTAMTAGCCTATACACTCCGA
AAAAAATTAAAACTAGCCATAAAATTTATTGAGATCATTGGAAAAGCAGT
ACATCAAATGTTTTTAACATCTATATATCCTGTTTTGCCTATAGCTTTCC
AAATAGGTATAATTTTCTGGTTTGGACTCATCATAGTTACTTGGTGTTCC
ATGAGTCTTCCTTCATTCAAGGTTTTAAGTACAGAATTTAATATGAAGAG
CTCCATTCCATCTTGCAAGTGTGAAAATCCAGATACAAATATCGGATTTC
AACCTGGTGACAAATGTAATCCAAAAGCATTTGATTTAAAATGTAAAAGA
CTATGTCCTGAACTTTTGTGTCAATTTACTGAGTTTCAAATATCCATTCA
ATTATTAATGGTCTACTGTTATAATATTTTTTTGCTTTATTGGTGTACTA
ATTTTTGCATGGGCCATTCACAAATGGTGTTATCTGGAGTTTTTTCGAAA
TGGTATTGGACATGGGATAAAGAATCAGCTCCAAATACTCAACTTTTTTT
AAGCTTGTATCAAGTCAATATTTTTCATTGTGGCACTCTAGCATTTGGTT
CATTATTTATAACACCCCTTAGGTTACCGAGACTACTTATTAGATTTATG
GTCGGGTCAGCAAGGAATAGCAGTCTTGTAATAAGAAGAATCTTTGAGTT
TTTGTGTCGATGTTGTTTCGAATGCTTTGAAGTATTTTTGAAATATATAA
CGAGGTAGGTATTTTAGCAAGTTTGTTATTAATTTTACTTAAATAATAAT
TATTATGTATTAGGAACGCATATATCGTATGTGCTGTTAGAAGTACAAAT
CTTTTGACATCCGGTAATGAGGCGTACAATTTGATAATCAGAAATGAGGG
GCGAGCAACGATTTCAAATACTACTGTTGATTTTGCACTCTTTTCAGTAA
AGTTAGCAATTGTTTCATTTGTCACATTTTCTTCATTTTGGATTTTAAGA
ATCTGGTACGATTATCATGGTCTTATGCCTCTGGTTTTTATAAGTGTTGG
GAGCTACCTTATTTGTTCATATTTTTTTGGTATATATAGCACTGCAATGG
ACACAATATTTTTATGCTTTTTGGAAGATTTAGAAAGAAATAATGGCTCA
AAGGCGAAACCTTACTATATGCCCATCAAACTAAGAAAAGTCATGAGAAA
AATGACCAAAATAAATAAAAAATCCAGGACTCAATTATCTGAATTACAAG
AAATTAGAAATTCTAATGTTCATAATGATAATGATGAAACAAAGACAAAG
GAAAACAGGAATTCGCCATAA
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