EMLSAT00000000377, EMLSAT00000000377-696224 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000377
Unique NameEMLSAT00000000377-696224
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1058supercontigLSalAtl2s1058:110779..111072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000377 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000377EMLSAG00000000377-683143Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001721EMLSAE00000001721-710649Lepeophtheirus salmonisexon
EMLSAE00000001722EMLSAE00000001722-710650Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772419auto772419Lepeophtheirus salmonispolypeptide
EMLSAP00000000377EMLSAP00000000377Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000377

>EMLSAP00000000377 ID=EMLSAP00000000377|Name=EMLSAP00000000377|organism=Lepeophtheirus salmonis|type=polypeptide|length=83bp
MLLKRRISKSRHFKSALLFLFLLQTTYSKSFYRQKRSAKRLFENLKEHFD
MSLEFQLRRIGLSSTTLKITSEFFVIEEMNYDT
back to top

mRNA from alignment at LSalAtl2s1058:110779..111072-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000377-696224 ID=EMLSAT00000000377-696224|Name=EMLSAT00000000377|organism=Lepeophtheirus salmonis|type=mRNA|length=294bp|location=Sequence derived from alignment at LSalAtl2s1058:110779..111072- (Lepeophtheirus salmonis)
ATGCTCTTGAAAAGAAGAATTTCCAAATCCAGGCATTTCAAATCCGCTCT
CCTCTTTTTATTTTTATTGCAGACAACATACTCCAAGTCCTTTTATAGAC
AAAAAAGAAGTGCTAAGCGTCTGTTTGAGAATCTAAAAGAACATTTTGAT
ATGAGCTTGGAGTTTCAACTACGAAGGATTGGACTCTCAAGCACTACACT
GAAAAGTAATTATGACATTCATTCTATAAAATAATATATTACTTTAGTTA
CATCGGAATTTTTTGTCATTGAGGAAATGAACTATGATACATAG
back to top
Add to Basket