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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1062 | supercontig | LSalAtl2s1062:309188..316519 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000393 >EMLSAP00000000393 ID=EMLSAP00000000393|Name=EMLSAP00000000393|organism=Lepeophtheirus salmonis|type=polypeptide|length=97bp
MKNYFVDILLSNDIFKLYRFLHIPKLLKININHFFANKMCYVKSNCRNSI
KVRTYCVWDMCFLHLEEIINTLFFDITIFFYLVLVQYDHGKECRKDS back to topmRNA from alignment at LSalAtl2s1062:309188..316519+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000393-696240 ID=EMLSAT00000000393-696240|Name=EMLSAT00000000393|organism=Lepeophtheirus salmonis|type=mRNA|length=7332bp|location=Sequence derived from alignment at LSalAtl2s1062:309188..316519+ (Lepeophtheirus salmonis)
ATGAAAAATTACTTCGTAGATATCCTTTTGGTTCTTTTAATTTTTTAAGT
GGTGGAAATATTCAATGTCCATATTCATTCAGCTTCCTTTTTTGTTGTTA
GACTCTTATCTATGACTTGTTTTAATTTTTAATAGCAACTATCAATATAT
TATATTCTTATACGATACAAATATACTTTAACTATCTACAATCATAATAT
ATTATATCCTTTGAAAATTAGCACACTATAAAATGCCATTGAATGAATGG
ACTTTAATATAAATAATTCTTAATTAAATTCAGTAAGACCATGAATTACT
AGATGTTTGGACGAGCGAAATTTTAAAAGTCGACGAAACCTGAGAAGCTC
ACCTTTTTCGATTAATAAGAAACGACAACTATGTAAACTCTTAAATAGTC
CTTAATGAAAGATATTATTCACCTTCTTGTAATGAGTTCATGTGCTTCAG
TCTTAATTTTCTAGCTTTTTGGAAGTCAAAATATAAAAATGATATAAATA
AACCTTAATATTCAAAGTTATATTGATAATATAAATTGATTGGCGCAAGA
AGTACAARTTTTTGTTTATAGCGGAACGATTGAAGCTAGCATTTCTGGAT
CCAAATCATCTCCGATATTCTTCCGAGTATTTTATACGCAAACAATTTCA
ACTCCTTAATGATCTCAGTGAGCTTATGATAATAGTGATAACTCTTCCTC
GAAAACCTCAGTGTGCAAGATATTGCCCATTCTAACTAATGATTCATCAG
TTAGGTGTTTTTGATCTTCCTCTCATAAAAGTCATTAGATCCAAAAGGAC
AGGGGTATTCCCCACCACACTAGAGGAAATGTATAGGCTATTTCAGAGCT
CTACAAGGACGGGGATTTCCTCCATAACACTAAAGGAAATACATATGCTG
TTCCGGAGCATAATTTAACATCTTGAATCCAATATGACGATAATTAAGTA
AATACTTATCCTCTTTGTGATTAGGGGAAGAAATTAGGACTCTTGAAGAC
TTGCTGCTGTTCAAAAATATACTTCTTTAATTTTTAATACACACAAACAT
GTAATTAATGGCATTATTAGAAGTCCAAAGTATCATAACAGCAATAATAA
GGAACCCTCGAGTAACTAAATAAAGAAGGTGAGCTTTAGAGGTTTCGTAG
GAAGGGATGATCCATACATACTAGTAAAGTAATTCCTATTTAGTCTTATC
AATTGTTTCTAAAAATCTTGATCAATACATGGTGAATCAGAATTAGAGAC
CTAACAAAAAAAATATTTAATGACTATATTTTGTTTAGAAGATGTGAKAA
TATGTTTTTACAAGTTCACACTTCGTTACCTTTATTGTATTCCGCAACCT
TTTCTCCAAAAAGAAACAGAAAAAAGGCCCAAAATCATCTGGCAGTTAGT
CAAATAAGTCAATCATACWAACTGCCATTTATATCTTATGTACTCCGTGA
CTATCACTCTCATATTTTTCTTCACCATTTGCAATATGAATTACAAATCA
TTAAAATCTACATACTATTTTATTCGATACTGCATTATAATATTGCTTAG
TAATATTAATTTTATTAAAAGAGTAGTTATACATTTGTATTTGTGTATGA
TAGCCAAAATTTCTTCATAGAAATAATAAAATGCCAAATATATATATTAT
TTAACACATGGTTATCGTTATTTTATCATGCAACCTATTCTCCGAAAATA
AGAGAAAAGGCCCGAAATTATATGTCAAATAAGTCAATCATACCAACTGC
TAAATATCTCTTATTACTCCCAAAATACTTAGAAACACCAGACTATCTCT
GTCATATTATTTCTTCAGCATTTTTATATTGAACTCCATATATATATTTC
GTAATATTAAAATCTCCATAGGATTTTATTCCATACTGTATTATAATATT
GTGTGAGGTATAAATTAGTATTTCTATATGATAGCCAAAATTTCTTCATT
TAAATAATAAAATGACCAACATATATATTAAATAAACGACGAGGGATCAA
CCAGAAACTGTTCTTTTGGAAACAGAGCATAATTATAGAATTGTATTTAT
CAAGAAGAATACAGTATGAAATAGCCATAGCCCATGATGTATCGAACGGG
AGAAGGGAATCGACAGCTGACAAGAAAATACATAGGTTATTTTTGTAACG
TCATGTTCAATATTGTCCTTTAACTGACCAATATATCAAAGCCTCCACCA
ACGAAGTTTAAAAAAGGTAATGTTGTATGTCTATCGGCGACCAGAAGTGT
TGTGTCGGKCCTTGTTTATTCGGTGCACTCCTTGGACTGTCAGTCCCTAG
AATTTCCCCTAAAAATGTCGATAGATTATTATGAAACATAAGATATACTA
GATATCTATTAAGAGTATTGCACAATTCTTGCAAAAATATTCATGTTTCC
ATTATAATGAATTTAGTACTAACATTAATTTTTATTTAGTTATATAATTG
AGTCTATATATACATATTTGATGTCGTGCCAGAAGCTCCGGTAGCTCGGA
TGGAAAGTTTTTATTCATCTACCCTACAGTCTGTACCTGGSACCAAGTGA
CTACTACCTGTTCCTGACTATGGGCAACGCGCTTGGGGGTACAATTTGGA
CCTCAATAGAGACCTATGAAAATTGGTTGTCCGAGTTTTTTACCAATAAA
GACAAAGGCTTCACCAAAAAGGGCATTACGAAGTAGAATTCTCGTTTCCA
AAAAGTTATGAAACAGAACAGGGTATATTTGGCTGAAATAGGATGATTGT
TACACTTCTTCTTAAGCATTGAAATAAAGCAAAAAGTACTAAATTACTTT
TTCCCTAACCTATTATAACAGAATAATTATAAAAAAGGAAAATACCCTCA
ATGACGTCTCGAGACATCAATTTTACCTTCTTTAAGGATCGAAAAGTGGT
ACTGGACTGGACCACAGTCTTAAAGAAGGACTTACAAAACATTAGTCACC
AGGATTACGGCAAAAGTTACAGATCGATTTTAATCTAACTTGGTACGAAG
ATTTTATTTGGTCACAGTAAGAGCCCATTAAATTAGGAGAGGTTAAAGTA
GCAAAAAAATTTAAAAATGGATAAAACTATAACTTTGGAACATATTGAGG
TACAGAGCTCAAATTAGTTTCATTATGTAGGTTTAATAAAGATTTTCAAA
TAACAAAAAATCAAATATAGGAAATATGAACATAGGTTGCGTTCTACCAA
GTGGTCATTCTAGCTTAATTTGCTTTACATTGTTCTGAATAACCTGGCGA
AGATTTCTAGTTGTTTGTATGTAGTGAGTCTTTCGGAATTTTTGCTTCCC
ACTCAACCATATTGCAAAGTTAATGAGGTTAAGATCAGGTGAAGGAGGGA
AAAGTAGAAGGTTTGGTCCCAAAAGTGATCAAAACTATCTTTTATAGTGG
GGGCTGGGGCCCCATCCTGCTGTGGCAAGTTTATGGGACTCTAATTCTGG
ACTACTCCATATAATTAGAAAAAAAAAAATAGAAGTTTCTTTATGGAATT
TACTCAAGCGACTACCATCAGGGAGTGCTTGCTGAGCCTGGAAACTGAAT
TGGTCTCCCTTTCGACCATATTCTACATTGTAAATTCAAGGAATTTAAAA
TCCAGTGAAGAGGGATGCCAATTGAGTCCAAAATTCCAATGGTTGACAAT
TTTTTTCCCTGCATAAACTTTAACAACGTATTCTGATAGAGTTTGGGCTG
TTGATTCCGAATATATACTTAGATTTCCCCCTTCACATCAAGTTTTTGTT
CTATCTAATATTTAACATTATTGGATGTTTACATTAAAAGGCTATAATGA
TACCACGTGTTCCTATTATGTATGTATGTCTTTCTCTCTATTTGATTCGA
GTACCTAGTGTGTGTTAATTATAATTAAAGATGCAAGGAAGGAGTCGAAT
CTGCTCTTTTGAGATGGGTGATCAAGTTAGAAATATCTTTCTTCGATTTT
GCTCTCTATGAGAACATATCTGAAGAGTTTTCGTATTTTCGTCTCATGAA
AAATTCAAGCCCTGATTTTTGCAGATGTAAGTTAAGTTGTATCGGAATTT
ACGAACAACGGAGAACAAATGTATGNGTTGAATCCATTTGTAATATGGTA
CTTAATATTCATAACTTCTATATCGTATCATTTGTCATCATTAATTTGTT
TGATTTTCTATATATAACTTCTATTAAAATTTATAATTAATATTTTTAGT
AATAGTTAATCGTCATTTCTGTTTTTATTTAATTTTACCCATACTTTTTT
AACTGAATATCTCAAATATACGTTATAATTCTTGAACTTATTAATTTACT
AGTAATCTACTGCTATGGCTTAAGTATAAGCGATTAGTTTTTTATTCAAG
TATTCCTGAATTTGAAAATTTCGACTTTTTTTTTATATTAACTGTTCTAG
TGTAATTTGAAAGAAGATTCCCATTTATATAGTAGAATCACATGATATTT
TATCCTCCAAACCTGTAACTTTAATCAATAGTACCATATGTCTCGCTCCC
GATTTTTACACGCATTCGCTTGATGCCCATCCCTATATATAACTCGGTGT
GTGCCAGCTTTTCCTTTAGCAATCAATATATCCTTTAGTTAATCCAATTG
ATACCAGTCAAACTTTCATTGCATGCACTTTGTTGTGTTGCTCTCATTTA
GATTTAGTAAACGTTGGTGATGATTATTATTTATTTTTCTAAATACTATC
ATAGCTGTTTACGAAATTCGAACACATCTATATAGCAGTATAATCTAGCC
ATGTCTATATCCTCACGAAGAAGAAAGTGCTGTAGCGAGCCAGATATATT
CTGCTAAATCTGTGGATGCTTCACTTTATCACTTCAAAGARGGAACATAA
CTCACTTTGTTAAGAGTGTGTAACTTACTTATTTTGATATACCGCTTGGA
GACCAAGACAAAAAATGGGCACTTCACATAGTATGCACGACTTGTGTCGA
TGATTTGGAGAGAACCAACAAACCACCTAGATAACTGCTACTTCTGCCTT
GTAAATATTTAAGGATTCAATATAAAGGACAAGCGATATATGAAATACCC
TAGCATCTCCTTTGCAATACGGCCAGTTTCTCATTCGGACAATTTACCTT
TTTTATATAGTCAGCAGATATTGATGAGGAAGCACATACCTAAGTCGATG
ATGATGATGGAGAAGATGCAGATACAAATTACATAACATTGGGTTCCTTG
ATTGGTCAAACTTCTCTGTATAGGCAACCTGAATTGAATGACCTGATTCG
AGATTTAAATTTATCGAAACAATCGGCTGAGTTTTTAGCTTCCATACTGC
AACAGCGAAAAATGCTGATGMTACAAGTGGTTTTTAGGGCTATTAAACTT
ATTTATTAATAGTGGAGTATTAATTTTTACCTCTATATTATTATTAATAA
TAATACAGTAATGAATAGTCATTTCTATTGAAGGGTCTCATCAGGGATTG
CATTCAAAAATATCACAAACGGGGCTTCAATGAGGAATGATTCTATTTCT
TATTTCCCAATTTTATTTTTTTTTTCTATTTTATTTTCATTGGAGACTTA
TACCAACAGTTGAAATTGGAGGGGGTCAATGAGCTCCTTGATGGATTATA
AGTTTGAGAACTTAATAAATGAATTTACTAAATACCTAGGATAATAGAAA
TAAAAGGTTAGAACATCAAGTAATCGGGCTTGCTAGAATTTTCAATTTGA
TGTATCGTACCGACTGCTGGGCAAGATTAAAGTTTTAAACCGATTAGCGA
AACGAGGGCAACAATAATAAACAGGTGAAAAATGTCTTAGTTATAAATTT
TGTCCGCCAGAAGCAGTATTTTGTTATTATGTCTACCAATCAAGTAAATA
ACAACTCTAGTTCCAAATATAAACTTGTATATATCCACGTATTAATAAAG
TAATAGTTTTAGGTTTAAAGCTTTAGGCAAGATAAACAGATTGTGACTAA
ACGCGCAAAGAATTATATTCTCTGACGTCAATATTGCTAGAATTGGCAAT
TTGATATATTGTACCGACTAATGGGAGGAAATACAGATTTTGACAAAACK
CTCAACTACTCATATATACTATAATGTCAATATAAAAAAGAGTGGGGGAA
GTTATATATCAACATGGTATAACCCAATGTTAATAGAAATATACGGTTAG
ACTATCATATAATCGGGGTTGCTAGAAATTTCAATCTGATGTATTGTACT
GACTGCTGGGCATCACAGGCAGGTTTTGACAAAGCACACAATCCCTCATA
GTCTTTGACGTCGCTATTACTGGAATTTTCAATTTGATGTATRGTATCGA
CTACTGGGCAAGAAAGACAAATTTGACAAAACACACAACCCCTCATACAC
TACGACGTCAATATTAAAAGGGCGGTGGAAGTCAAACAACAGTCGTACAA
GCGTTATGGTATAACCTTGTATTTCTATTAAACATTKTAAATACTATTAT
TTACTAAGTTCAGGGCTAGAATCACTTGAAGATATCATAGTCTAGTAGGA
YGGGATCATAAAAATGTCCCCTTAAGGCTATTAGTAACTTTGTGACTCAC
GCAACACTACCTTTGTGGGTTTTTAATCAAGGGAATAGGGGCTTGGGACC
GCAGCATAATTTTTAAAAGGGCTCAAAAAATGTTAGAAATTTGCATGAAT
TATGACACATTTGGTTAAATATAGTCTACCAAAGTTTGTTGATCTCTATT
ATAGAACCTCATCTGTACATKCCTCTTGTAATCATGCATATTGAAAACCG
ACACTCATAGTCTAAAACACTCTCAATATGAGGTATAACTGTAGTGTTTA
TATGAATTGAATGATCGATTAAGAATGATAAACTATAAATAAATAATGTC
ATATACAAGTCGAATGATATTTTTAAACTTTATCGTTTCTTACATATTCC
AAAGCTGCTTAAAATAAACATAAATCATTTTGTAGTTAAAAAAAGAAGAT
TCATGATTCGTTAGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAACGACATACGAAACA
AGCATACATATTTGTTTCAGTGATAAAATGATGTAAAGTCTGTCCTCATC
TAAACAAATTCAAATATATATATATATACATTATATAAAGTTTGCAAATA
AAATGTGTTATGTAAAAAGTAATTGTAGAAATTCTATAAAGGTTCGGACT
TATTGTGTGTGGGATATGTGTTTTTTACACTTGGAAGAAATAATAAATAC
TCTCTTTTTTGATATTACTATTTTTTTTTACTTAGTTTTAGTACAATATG
ATCATGGTAAAGAATGTAGAAAGGATAGTTAA back to top
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