EMLSAT00000000396, EMLSAT00000000396-696243 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000396
Unique NameEMLSAT00000000396-696243
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1063supercontigLSalAtl2s1063:105826..106746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000396 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000396EMLSAG00000000396-683162Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001778EMLSAE00000001778-710706Lepeophtheirus salmonisexon
EMLSAE00000001779EMLSAE00000001779-710707Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772299auto772299Lepeophtheirus salmonispolypeptide
EMLSAP00000000396EMLSAP00000000396Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000396

>EMLSAP00000000396 ID=EMLSAP00000000396|Name=EMLSAP00000000396|organism=Lepeophtheirus salmonis|type=polypeptide|length=287bp
MDDHRPMLRRSLRRCRFFLDEILEHARLRRNLSEKELISMFRHSESVQKI
IQASEKNPDLNYNLSIVFSENEIQSMRNSFKTLYLTLLNNLRLGESVLAN
VLKVTSKISHSVPCEDVFNENINCVRPLLIHLLEDHQHRKKVKAILLRNG
IISLSGIESKMFVESGAFLTLIAALVHTKDQFFSKSFLSLPLTFLELEMA
LLFIQQSVELFVQAAQSHESLMIFVVKLTDKLLECRRNDVIHLLVDIFET
ASLNVSESLLGYLSKYKLDELQHEIYQILNQKLNYNN
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mRNA from alignment at LSalAtl2s1063:105826..106746-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000396-696243 ID=EMLSAT00000000396-696243|Name=EMLSAT00000000396|organism=Lepeophtheirus salmonis|type=mRNA|length=921bp|location=Sequence derived from alignment at LSalAtl2s1063:105826..106746- (Lepeophtheirus salmonis)
ATGGACGATCATAGGCCCATGCTCCGAAGATCACTTAGGAGATGTCGTTT
CTTTCTAGATGAGATCCTTGAGCATGCAAGACTACGAAGAAATTTATCTG
AGAAAGAGCTTATCTCCATGTTTAGACACTCTGAATCCGTTCAAAAAATC
ATACAAGCATCTGAAAAAGTAGCGATTTCCGCCCTTGATTCTAACATCTA
AATTCCTTATATCCTTCATTTGCAGAACCCTGATTTAAATTATAATCTTA
GCATTGTATTCAGTGAGAATGAGATACAGAGTATGAGGAATTCATTCAAG
ACGCTTTATCTTACTTTATTGAACAATTTGCGCCTTGGGGAGTCCGTTCT
GGCCAATGTTCTCAAGGTGACCTCTAAAATATCCCATTCTGTCCCTTGTG
AAGACGTCTTCAATGAGAATATCAATTGTGTCCGTCCCTTATTGATTCAT
CTCTTAGAGGATCATCAGCATAGAAAAAAAGTGAAGGCAATTTTGTTAAG
AAACGGGATTATTTCTCTGAGCGGCATTGAATCTAAAATGTTCGTCGAAT
CAGGAGCCTTTTTGACACTTATAGCTGCCCTTGTCCATACAAAGGATCAA
TTTTTTTCTAAAAGCTTTTTGAGTCTTCCCTTAACGTTTCTGGAATTGGA
AATGGCTCTACTGTTCATTCAGCAAAGTGTGGAACTCTTTGTCCAAGCCG
CTCAAAGCCACGAATCCCTCATGATATTTGTGGTGAAACTCACAGACAAG
TTGCTAGAGTGTAGAAGAAATGATGTGATTCATTTATTGGTGGATATTTT
TGAGACAGCATCATTGAATGTATCTGAAAGTTTATTGGGATATCTGAGCA
AATACAAGTTGGATGAACTACAGCATGAAATTTACCAAATACTAAATCAA
AAGTTGAATTATAATAATTAA
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