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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1063 | supercontig | LSalAtl2s1063:30854..35288 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000398 >EMLSAP00000000398 ID=EMLSAP00000000398|Name=EMLSAP00000000398|organism=Lepeophtheirus salmonis|type=polypeptide|length=701bp
LVSRLRHSGPLSYCTTPSCLQAAASILASQNASYSPCSEFWQYACGSWLS
THSIPASKSYWSVLEEAKAGSREDKSRLITTSSHEPSQFNSLEWKVSNFY
HSCMSLSFIESDKEKPLLKIINSLGGWHVLRSFNLYSWDSRRVLRELHSE
FAVHALFRIGVVPDVQDPDYNIIAIYPDGLGMSDKSYYHRLPDDPAVVAY
QTYLKDSAMLFGASSPEAHKFSIDMFNFEKRISEITPSGEYLSDPRKINN
KMTVKDLHTMSMTVPWLEILKAAFSDASTTEETGIIVVSPQYVADIAVIM
STTDRGSLNNYLMWRLXXTYMPYLSKNYREVVDVYRKSISGAQKPLERWE
FCQETTDRFFGHYLNAIYSQRDNIPDSVVKKVFDYIKHTVAKTVSVSSHF
EDYESRRATVGKLKNMSIQIGTPDFLRDRKNLKTLYKDLLVQTNDFFQNI
LYGVSFLRKRQEALLLHSSESVSQLENEYWLESLNQESEIVYVPSRNKVV
VPELFLRSPFVDPGYPNSINMGGIGVRLTEAVINGIIGIGLYFDSKGRFV
DEENNNNKAHNKQSLWIEMSAERLMKSYSSNRIDTPDYLKKCRSDTVLSL
IALQQSLFALEDILSVEKGLILPALEMLDPQSLFFLAYGQSLCASRTFKR
RDIDRTSGHSLLNQEKLKGALLHLNEFSHFYFCGDNSLSSSSSKFDRRKI
L back to topmRNA from alignment at LSalAtl2s1063:30854..35288+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000398-696245 ID=EMLSAT00000000398-696245|Name=EMLSAT00000000398|organism=Lepeophtheirus salmonis|type=mRNA|length=4435bp|location=Sequence derived from alignment at LSalAtl2s1063:30854..35288+ (Lepeophtheirus salmonis)
CTAGTTTCAAGACTACGCCACAGTGGACCCCTCTCCTACTGCACAACTCC
ATCCTGTCTCCAAGCTGCAGCCTCCATCCTCGCATCTCAAAACGCATCCT
ACTCCCCATGCTCAGAGTTCTGGCAATACGCATGTGGCTCCTGGCTCTCA
ACTCATTCCATCCCCGCTTCCAAATCCTACTGGAGCGTTCTGGAGGAAGC
CAAGGCAGGGAGTCGAGAGGATAAGTCCCGTCTTATTACCACTTCGAGTC
ATGAGCCTTCGCAGTTTAATTCCCTTGAGTGGAAAGTCTCCAACTTTTAT
CATTCCTGCATGAGCCTCAGCTTCATAGAGAGTGATAAAGAAAAACCTCT
CCTTAAAATTATCAATTCTCTTGGAGGATGGCATGTCCTTCGATCCTTCA
ATCTTTACTCATGGGACTCTCGGCGTGTACTAAGAGAGCTCCATTCTGAA
TTCGCAGTACATGCTCTTTTCCGTATAGGGGTTGTGCCGGACGTGCAGGA
TCCCGACTATAATATCATTGCTATTTATCCAGACGGTCTCGGCATGTCAG
ACAAGTCCTACTATCATCGTTTACCGGATGACCCTGCTGTTGTTGCCTAT
CAAACCTATCTCAAAGATAGCGCTATGCTCTTCGGCGCCTCTAGTCCTGA
GGCCCACAAGTTCTCTATTGATATGTTCAACTTTGAGAAACGTATTTCCG
AGATCACTCCTAGCGGTGAATATCTAAGTGATCCCCGGAAGATCAATAAT
AAAATGACTGTCAAGGATCTTCATACCATGAGTATGACGGTGCCATGGCT
GGAAATCCTCAAGGCAGCTTTTTCAGATGCTTCTACAACGGAGGAAACGG
GGATCATTGTTGTGAGTCCTCAGTATGTCGCTGATATTGCTGTTATTATG
TCCACAACTGACCGTGGCTCATTAAATAATTACCTCATGTGGAGGCTARC
GGRGACTTACATGCCTTATTTATCTAAAAACTACAGGGAAGTGGTTGATG
TATACCGCAAATCTATTAGTGGGGCTCAGAAACCACTTGAGAGATGGGAG
TTTTGTCAAGAAACGACGGATAGATTTTTTGGACATTACTTAAATGCCAT
CTACTCTCAGCGAGATAACATCCCTGACAGCGTTGTCAAAAAGGTTTTTG
ATTACATAAAGCACACTGTGGCCAAAACGGTATCTGTCTCAAGTCATTTC
GAAGACTATGAGTCCCGGAGAGCCACTGTGGGAAAGCTCAAAAATATGTC
AATTCAAATCGGAACTCCAGACTTTTTGAGGGATCGTAAGAATTTGAAAA
CCCTCTATAAAGACCTTTTAGTTCAAACAAATGACTTCTTTCAAAACATT
TTGTATGGTGTATCATTTCTACGAAAGAGACAAGAGGCTCTACTCCTTCA
TTCCTCCGAGTCAGTGTCCCAACTAGAGAATGAATACTGGTTAGAGTCCC
TGAATCAGGAGTCCGAAATAGTGTATGTTCCCTCAAGGAACAAAGTCGTT
GTGCCTGAGTTGTTTCTACGATCCCCGTTTGTGGACCCGGGTTATCCAAA
TTCCATCAATATGGGTGGAATTGGAGTGAGATTAACAGAAGCTGTGATAA
ATGGAATTATTGGCATTGGCCTATACTTTGACTCCAAGGGACGGTTTGTT
GACGAAGAGAATAATAACAACAAGGCCCACAAGTAAGTTGAATCATCTAT
GTACTATTTAGAGAGGTCCTTAAATTTTGTTTTTCCAAATGTGTATGTGG
GGTAGGGGGAGAGGATGATATTCAAAAAATGATCCTCATGATAAAAAATG
GACAAACTGTTATAGATTGAGCAAATGTCGTATGGGGCATTCCATGTGAA
ATGAACGAAAACATGTAAAAAATGTCATCCGACTCCCTTAGATTTTGATG
ATTTTTGCCACACAAGCTCAAAGTCATGAATAAATTAAGTGTGCCCAATT
TCAGCACATAACTCTGAGCCGTTTTTTGACAGAGTTATACCCTATTTATA
AGGAACATGTTGCCAAAGTTTCATATTCATCAGAGTTGGGCAAATTTTTT
TACTGTTGATCAAGTACTTGCAAGTTTATTTCAAATTTTTTTTAAATCAA
ATTTGAGCTCATGAGAAATTTAAATCTACCACTACAAAATAGTTAAGTGC
CAAATTTCATGGGGGTAACTAACTCTTTGGGATAAAAAAATATACAAGAA
AAAGGAGTGTCTGGTAAAAAGACATTAAAGCGACGCTGAAAATTTATGTC
TGAGTCTAGGATCTAGAAACCCATCCCCTCCATTGCAATACTCTTTAGAT
CTTCGTTTGACAATTTTGCCAACCCTACAACCATGATATCAACCCTATCG
GGGAAATGAATTAAAGCTATAAATAGAGATAGGACGGGKCTTGGATCCCA
AGTATCCGTACAGTTTAAATAAACTTGTATTCTCAGAAAAGATCCAAGAC
CCTAGCTGGCTTCGAGTACTTCAACTTTTGCGGATCATAAAAAAGATCAC
ACGGATTTTCCAGCTCTTAAAAACCTCAATATATTGATTCATACATCATC
CTAGAACTAAAAAACCAAATGTACATTCAATATCAAACGTAGCATCTCTA
TTCATTTGTATAGGTGCTTGGACCCACATCTACTTAAACAGTTGCATGGC
CTGGTTATTCCGCACAGTGTTACCTCAATATCACAAAAATGTATTAAGTT
CCCTGCTGTTTCTTCTTCTTTTTGTCCAATCAGTGTTCTGAACATTGATT
GATTGGATACGAATTAGTTTTTATGAAGCAGTGAACAATTACACTATGCA
ACAAAATTCAGATCTTTGGACACCTTCCGACCAAAACCAAAGCTTTTTTT
GAAATCAAATGTGAGAATTCGAACAGAAACAACTGAGGCTCTGTTCTGAT
TTCTTCTTAAATCTGTAAGTTTCATTTGAGGGATGAATCCTCACAACTTG
TTGAGTGATATGGTATTCAAACACTTTGATTGATGTGTCCTTGTGGTGTA
GGATCTTTAAAAAAGGATGTTTATTTTCTGATCATTTTTCTAGACCAATG
TTATGACGGCCACATTTAGTTAATAATATTTCAGTTTTTTTGTTGTTTTT
TTTTTAAAAAAAAGGTTATACAGTAATTATGAGGGATCGTTTTTGGGGTC
GTCTCCTTTATCACTCAATTAGCCTCATTGAATGAAGAAATATTTATCAT
TTTTCGTTTTTAACACCGCTTATGTGAGTGATGTCGTTTAATAGTGACGA
CAATTTTTCAATTATGTGATTACTAATAAATTTGAATAAAATAAGCGTTG
AATGTATTGTGTTTAATCTTTCTAATATGGTAGTGCATTAAAATTTTACC
AGAGATTGGTTTTCTTCACATTTTTTTCTATTAGAATTTTTAATGTTATA
TTAAATTTAACAAAAAGTGTATACGAAAAATAATTATTTACCACAGTTAT
CGTTTAATTTGTTTAATTTCAAAGAATGAGCAACGAAAAATGTATGAAAA
TATCAATTATTACTCAAGTGGGAAAAAAGGACGTATATAGACTTCCATCA
ATATTGATCCAACTTTAAGTATATTTATTTAATTTTTTATCAAGAGAAAC
ATTTTTGAACCATGTTCCCCTCTCTAAAACAAATTTAAGGACCCTTTAAA
CGTTCATTCATCCTTTGATTTTATTGTATATTTTAATCAACTTTCTATAT
ATCTAATTTTGCCCTCTCCATATTTCAGCAAACAAAGTCTTTGGATAGAA
ATGTCAGCGGAGCGGCTCATGAAGTCTTATTCCAGCAATCGTATCGACAC
ACCAGACTATCTTAAAAAATGTCGTAGTGACACGGTTCTGAGTCTCATTG
CACTTCAACAAAGCTTATTTGCTCTCGAAGATATTCTCTCTGTTGAGAAA
GGACTTATTTTACCAGCTCTAGAGATGCTCGATCCCCAGTCTTTGTTTTT
TCTGGCCTATGGTCAGAGTCTATGTGCCTCAAGGACGTTCAAACGAAGGG
ACATTGATCGGACTTCTGGACATTCCTTGTTGAATCAAGAAAAATTAAAA
GGTGCTCTTCTTCACTTGAACGAATTTAGTCATTTTTATTTTTGTGGTGA
TAATTCATTATCTTCCTCCTCTTCCAAGTTTGATCGAAGAAAAATCCTTT
AAGGAAAACAAATTCAGTCTCTATTCCTCTTTTTCAATTTCAAGAATTAA
AAAAATAAAAAAAAGTACTAGGAAGATTGTCCTAGGGAATTCTGTCATCA
AAACATTCCTCTCAGGAAAGATGTCACTTGTGGCAAATCGCTGCAATTAT
ACTCTATATATATGTAGTCATTCATCTATAAATCTGCACCATATAAGACT
CACCCGTGGGGTGTCTGCTGGGGGTGGGCTGGAGGGACTCTACACCCCCT
GCCCAAATTAAGGAATTTTGGCTTTTAACTAGACA back to top
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