EMLSAT00000000401, EMLSAT00000000401-696248 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000401
Unique NameEMLSAT00000000401-696248
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1063supercontigLSalAtl2s1063:86108..87342 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000401 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000401EMLSAG00000000401-683167Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001791EMLSAE00000001791-710719Lepeophtheirus salmonisexon
EMLSAE00000001792EMLSAE00000001792-710720Lepeophtheirus salmonisexon
EMLSAE00000001793EMLSAE00000001793-710721Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771772auto771772Lepeophtheirus salmonispolypeptide
EMLSAP00000000401EMLSAP00000000401Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000401

>EMLSAP00000000401 ID=EMLSAP00000000401|Name=EMLSAP00000000401|organism=Lepeophtheirus salmonis|type=polypeptide|length=335bp
MDKVHIKSVEPLKEGSSRFVVPHRMIYEQNGVEKVWDLVDSHDSVGAIIY
NATSNKLVFVSQFRPPVYRRAQLAKPNQNVGGDEGIVLEICMGIVDNKSL
STEETIKKEILEETGFSVSNVEKIGSWVNSVGLLGNTTTLFYSRVTEKDR
VSKGGGRSDEGEMIDVVEISLSEVKDYIESAKVTPLLTITIIIQCRVSYI
ELLTLKQGFVEGTKGIVLELCEGIVDDESLSLEETMRKEILEETGHAVHG
PLEKIATWLDNVGHSGTWRTLFYIEVTNDDKISRGGGCATEGELIDVIEL
TPQEVKDRLDDPESVDLSVSFAYYWFMANKFNNDN
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mRNA from alignment at LSalAtl2s1063:86108..87342-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000401-696248 ID=EMLSAT00000000401-696248|Name=EMLSAT00000000401|organism=Lepeophtheirus salmonis|type=mRNA|length=1235bp|location=Sequence derived from alignment at LSalAtl2s1063:86108..87342- (Lepeophtheirus salmonis)
ATGGATAAAGTACATATCAAGAGTGTGGAGCCTCTCAAAGAGGGATCCTC
GCGTTTTGTCGTCCCACATCGAATGATCTATGAACAAAATGGCGTGGAAA
AGGTATGGGACCTTGTAGACAGTCATGATTCAGTTGGGGCAATCATTTAT
AATGCTACTTCCAACAAATTAGTATTTGTATCACAGTTCCGTCCCCCAGT
TTACCGACGAGCTCAATTAGCAAAGGTACTATCTAAGAGATATCTCAGCA
GACTATAACATTGAATTCCTCATTTAAATTAAAAATTGTTTTAACTTTTA
TTTGACTGTAAAACTTAAGCCTAATCAAAATGTGGGAGGAGATGAAGGAA
TTGTCCTTGAGATTTGTATGGGAATTGTGGATAATAAATCCTTGAGTACG
GAAGAAACGATTAAAAAAGAAATTCTAGAAGAAACCGGCTTCTCGGTGTC
TAATGTAGAGAAAATTGGATCCTGGGTCAACTCGGTGGGTCTTTTAGGAA
ACACAACTACTTTATTTTATAGCAGAGTAACCGAGAAGGACAGAGTATCC
AAAGGAGGTGGGCGATCCGACGAAGGCGAAATGATTGACGTTGTCGAAAT
TAGTCTTTCAGAAGTTAAGGATTATATTGAATCTGCTAAAGTGACTCCTG
TGCGTACGACTACAATTCTCTTATTTGGATATTATTGGTTCATGGCTAAC
AAATATTCCTTAGAGATGCCGCAATGATCTCCTCAGCATTTGATTTTATT
ATATTACATATATATATATTGTTTAATTATAGCTATTAACTATCACAATA
ATTATACAATGTAGAGTCTCTTATATAGAACTTTTGACTTTAAAGCAAGG
TTTTGTTGAGGGTACAAAAGGGATTGTTCTTGAGCTCTGTGAAGGGATAG
TCGATGATGAGTCTTTAAGTCTGGAAGAAACAATGAGAAAAGAGATCCTT
GAAGAAACTGGACATGCGGTTCACGGACCCTTGGAGAAAATAGCAACTTG
GTTAGATAATGTGGGACACTCTGGAACATGGAGAACTCTTTTTTATATAG
AGGTTACAAATGATGATAAAATATCGAGAGGAGGAGGATGCGCAACTGAA
GGAGAGCTAATAGATGTAATTGAATTAACACCCCAAGAAGTGAAAGACCG
TCTAGATGATCCGGAATCGGTTGACTTAAGTGTATCTTTTGCTTACTATT
GGTTTATGGCCAATAAGTTCAATAATGACAATTGA
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