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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1064 | supercontig | LSalAtl2s1064:33017..37342 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000409 >EMLSAP00000000409 ID=EMLSAP00000000409|Name=EMLSAP00000000409|organism=Lepeophtheirus salmonis|type=polypeptide|length=974bp
METRKAEWSELLKLPNPTDFHDGETWYLLSQSWLSTFQESPTPGLIDNSD
LLDEKGELKKGLEMGKDFSIVSQETWNDLVEEYSVLPQQEPIPRNVVGSN
LYIYPSDLSRLKELVSSLNNKKMQAGESWYLIDYRWYTALKTYLDDGLED
NHPGAIDNAKLLGVNEYLSSCIYERVDFDYVDKPTWDEMVRIFTMNSEKD
CIERKVMLDGQSDPKIDIFPYNIFLRNGENEKIKFQCSKFDTPESLIEKI
RERLSMDSSMDIKIKVENPSKFSKLDSSRITYVTKDSNSIDAIXFGSILS
VXKHXPAKPLKLRKRMYGGKFEAWHLFGLSNLGNTCFMNSIIQGLSNTPP
ITEYFANDNYIEDINKTNPLGMKGEIAKAFGEMIKLMWSGNYSYIVPRSF
KSAVGRFAPQFSGYQQQDSQELLTFLLDGLHEDLNRVKQKPYIEIKDSGD
RADEEVALEAWDVYKKRNDSVILDVFHGLLKSTLICPVCSKVSVTFDPFC
YLSLPLPVHRDIQIKILLVWYDLSKAPTTFKLTVSKTGTIADLLKVLSRE
TKIPEDHFKVADIFNNKLHKELLSHNLISEIDRENALIYEVPPTTNENXL
CYLYLREEKEKSLSTIFHRPIFLRVKKGISAEEFYDLTLSHLSHFIKKPD
PDDTALKNNDEIKANGVSESALETQDDNENEDSSLASEDFKMNVGDDEDS
QRSEKSLMFRLCILNLHGHLVNSYIEMSDKNLFSDKKLVIGLEWTTENKM
AYFDQELAQVVHQDKSTQKAPTKQSIKLTDCLELYTTTEKLGEDDAWYCP
RCSEHQQATKKFDLWSLPSILVISLKRFSYTRNWRDKLDTLVDFPINGLD
MSPYIINPNYGPAVYDLIAVSNHYGGMGGGHYTAMAKNKNDGEWYNFDDS
NVQLKKEKDVVTPAAYVLFYRRRETQSKVSSSTGGSXSTCXSYNNSHIPN
ELNNGIDIKNGNLSPGEEEKMDTN back to topmRNA from alignment at LSalAtl2s1064:33017..37342- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000409-696256 ID=EMLSAT00000000409-696256|Name=EMLSAT00000000409|organism=Lepeophtheirus salmonis|type=mRNA|length=4326bp|location=Sequence derived from alignment at LSalAtl2s1064:33017..37342- (Lepeophtheirus salmonis)
ATGGAAACCCGTAAAGCAGAATGGTCGGAGCTGCTCAAGCTTCCAAATCC
GACCGATTTCCACGACGGAGAAACTTGGTAAAGAACCCACTGGGAACAAG
GTCAACTCGTAGGCCACCCCATGATATTTCCTGTCTTTTCCTCTTTTCAG
GTATTTACTAAGTCAATCCTGGTTGAGCACATTCCAGGAATCCCCAACGC
CGGGCCTCATCGATAACTCGGACCTTCTGGATGAAAAGGGAGAATTAAAA
AAAGGCTTAGAAATGGGAAAGGATTTCTCCATTGTGAGTCAAGAGACTTG
GAACGATCTTGTTGAAGAATATTCCGTCCTCCCTCAACAGGAGCCAATTC
CTCGAAATGTATGTCCATATATGATATGTTAGATATGATAGCAAATGTAA
TACATTGTCATTTGTCACACGGCCTTGCTGCAATACTTGCTTGCTTTACA
TACTATTAATATCTAAAGGAAAAGTTCTTAAAAAAGAAAAAAAAGAATCC
GTGCAGACATGAAATATGTTAAATATATACTTATAAAACTGTCTTGTTGT
GAAAGTTAAAAAACAAACACAAAAAAAAAAGAAGGAAAGAAACTGTGTTT
CGCGATTAGTACTCCAAGAGGGAATTCATATCAAATCTCTGAGTCGGATG
CTTTAATTAATTATAATTCCGAAGCACAAATGATGCTATTTTCTTGTATC
TAGGAGCGTCTGACAAATTTACCTCAGAGATAATGGCAACAACTCTCATA
TTTATTAGCACGCTATGTATAAAAAAGATATTTTAAGTCTAAATATTAAT
GTTAGCAAATTTTTTTTACAGGTTGTTGGAAGCAATTTATATATATATCC
ATCAGGTCTGTAACTCCCTACTTAATCTATTAAAATACGCCAATTCTCTG
CTTTGAAAAAAAATAATACCTTGTAAAAGTCTTTAGAGTGTTGTAGCTTG
TTTCTTTGGAGTCTTAGCTCTGTTCGTTTCAACTGCTGGAAGTTCTTATT
ATTTTTTCTTATTCAGATTTGTCTCGTTTGAAGGAGTTGGTGAGTTCTCT
CAATAATAAAAAAATGCAAGCTGGAGAGTCATGGTAATTGCAATATTATT
TTATTTTATTTACATATTCATATGAATTTATTATTAGGTACCTGATCGAT
TATCGTTGGTATACAGCCTTAAAAACCTACTTGGACGATGGTTTAGAGGA
TAATCACCCTGGTGCAATTGATAACGCGAAACTTCTTGGTGTGAATGAAT
ATTTAAGTAGTTGTATCTATGAGCGTGTAGATTTTGATTATGTGGACAAA
CCAACCTGGGATGAGATGGTTCGAATCTTTACAATGAATTCAGAGAAAGA
TTGTATTGAACGGAAGGTTAGATTTACCCAAATATTTTTGGGCCCCTTTG
AAATATAGTTATGCGTTTTTAGGTTATGTTGGATGGTCAGTCAGATCCTA
AAATTGATATATTTCCATACAATATTTTTCTTCGAAATGGCGAAAATGAA
AAAATTAAATTTCAATGTAGCAAGTTTGACACGCCAGGTATGTGTTTTCA
TATTATAATTCATTCCAATATTTTGTACATACTTTCAATAATAAATGTTA
AGAATCCTTAATTGAAAAAATTCGTGAAAGACTAAGTATGGACTCCAGCA
TGGACATCAAAATTAAAGTTGAAAATCCTTCGAAATTTAGTAAATTAGAT
TCTTCTAGAATTACATACGTAACGAAAGACTCCAATTCTATAGATGCCAT
TRCGTTTGGTAGCATMCTTTCAGTARAAAAACATYCYCCAGCCAAACCTC
TTAAGCTTAGAAAGTGAGTCAGTCAAAAGCTCAAATATCTAGCTTTTGAA
WTCTTCTTTTTTTTTTTTTNNTGGAATGATACTGATTTGATTTTATATTA
TTTATTCAAGTAAAAAMAATTCCATGKATATTCTAAGTAATAATTCGGAT
GATAAGAAAGATTCTAATGAGTCATCGTATAGCTCAATTCCCACCCGCTA
TAATATGGCACCTTATTCAGAAGGATGTACGGAGGAAAATTCGAAGCCTG
GCATCTGTTTGGTCTATCGAATCTCGGGAATACTTGTTTTATGAATTCAA
TTATTCAAGTAAATTCATTTTTATATTTGCTCTATTAGATCATACTATAA
TAATAATCATTTTTATTGTTACAGGGATTGTCTAATACACCTCCAATCAC
TGAATATTTTGCCAATGATAATTATATTGAGGATATTAATAAAACGAATC
CTCTTGGTATGAAAGGGGAAATAGCTAAGGCATTTGGAGAAATGATCAAA
TTAATGTGGTCTGGTAACTACTCGTATATTGTTCCACGCTCTTTTAAAAG
TGCAGTTGGTCGATTTGCTCCGCAATTTTCCGGGTATCAACAACAAGATT
CTCAAGAACTTTTGACGTTTTTGTTGGATGGCTTACATGAAGATTTGAAT
AGAGTTAAGCAAAAACCTTATATTGAAATTAAGGACAGTGGTGATCGAGC
GGACGAGGTAAATTCTGTTTTCATTTGCATCGTTGATATTTAACTATTCC
TATTACATTTTTAAGGAAGTGGCTCTAGAAGCTTGGGACGTTTATAAGAA
AAGGAACGATTCTGTTATTTTAGACGTATTTCATGGTCTTTTAAAATCAA
CTCTCATCTGTCCTGTCTGTTCTAAAGTGTCAGTAACATTTGATCCTTTT
TGTTATCTTTCTCTTCCATTACCTGTACATCGGGATATACAAATCAAGAT
TTTGCTTGTTTGGTATGACCTATCAAAGGCACCGACAACTTTCAAATTGA
CGGTTTCTAAAACGGGCACTATCGCGGATTTATTAAAAGTTTTGTCGAGA
GAAACAAAAATACCTGAAGATCACTTCAAAGTTGCGGATATTTTCAACAA
CAAGCTTCACAAGGAGTTATTATCTCATAACTTAATATCTGAAATTGATC
GTGAAAACGCTTTAATTTACGAAGTACCTCCAACTACAAATGAGAACRCC
CTTTGCTATCTTTACTTAAGAGAAGAGAAAGAAAAATCTTTGAGTACGAT
ATTTCATAGGCCCATATTTTTAAGAGTTAAAAAGGGCATAAGCGCAGAAG
AGTTTTATGACTTGACTCTATCACATTTATCTCATTTTATTAAGAAACCA
GATCCTGATGATACTGCTTTGAAGAATAATGATGAAATTAAAGCTAATGG
TGTGAGTGAATCTGCTTTGGAGACTCAAGATGATAATGAGAATGAGGATT
CCTCTCTTGCGTCTGAAGACTTTAAGATGAATGTGGGTGATGATGAGGAT
AGTCAGCGTAGTGAAAAGTCCTTAATGTTTCGATTGTGTATCCTTAATTT
ACACGGACATTTAGTGAATAGCTATATAGAAATGTCTGATAAAAACCTTT
TTTCTGATAAGAAGCTCGTAATAGGACTTGAATGGACGACCGAAAATAAG
ATGGCATATTTTGATCAGGAATTAGCTCAAGTTGTGCATCAGGATAAATC
AACTCAAAAGGCACCAACCAAACAATCAATCAAATTAACCGACTGTCTGG
AGTTATATACAACCACTGAAAAATTAGGAGAAGATGATGCCTGGTAATAT
TTTTCTTATTTTATAATTTTCCATTTATTAGACATATAATATTAATTAAT
TTTATTCGTTTCACACTCCCGCTAGGTATTGTCCTAGATGTTCTGAACAT
CAACAAGCGACGAAGAAGTTTGATCTCTGGTCCTTACCGTCAATCCTTGT
TATTTCCTTGAAAAGATTTAGTTATACACGAAACTGGAGGGATAAGTTAG
ATACGTTGGTTGACTTTCCAATCAACGGATTGGATATGTCTCCATATATT
ATTAATCCAAATTATGGTCCGGCTGTGTACGACCTCATTGCCGTTTCTAA
TCATTATGGTGGCATGGGAGGTGGACATTGTAAGTATTAGTATAAGTAAG
TCTTTTTAAGTTATGACTTTTTTTCTTTTTTTTTAGACACTGCAATGGCC
AAGAATAAAAATGACGGAGAATGGTATAATTTTGATGATTCGAATGTTCA
ACTAAAAAAGGAAAAGGATGTTGTGGTATGATTTTGCATTAGCATTATAA
TTGCCCCGATTTACGACTTTTTTACCCTATTTAGACACCTGCTGCCTATG
TACTCTTTTACCGAAGACGAGAAACGCAATCCAAGGTTAGTAGTAGTACC
GGCGGCAGCMCCAGCACATGTASGAGCTACAACAATAGCCATATTCCAAA
TGAACTAAATAATGGAATTGATATTAAAAATGGTAATTTGTCGCCTGGAG
AAGAGGAAAAGATGGACACTAATTAA back to top
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