EMLSAT00000000411, EMLSAT00000000411-696258 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000411
Unique NameEMLSAT00000000411-696258
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1064supercontigLSalAtl2s1064:45136..46089 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000411 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000411EMLSAG00000000411-683177Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001825EMLSAE00000001825-710753Lepeophtheirus salmonisexon
EMLSAE00000001826EMLSAE00000001826-710754Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770490auto770490Lepeophtheirus salmonispolypeptide
polypeptide-auto770492auto770492Lepeophtheirus salmonispolypeptide
EMLSAP00000000411EMLSAP00000000411Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000411

>EMLSAP00000000411 ID=EMLSAP00000000411|Name=EMLSAP00000000411|organism=Lepeophtheirus salmonis|type=polypeptide|length=308bp
MPPEQQKIYQEISKLNGLVDQMTIQKVKNRCKDVKIDPRGHNYVVKRRLK
EYYKREKXEEAGLAVNRNVHYFVVIDFEATCEERNPSNYKHEIIEFPAVL
ISSRTAEVVDTFHEYIRPLINPNLSTFCKNLTGISQKTVNASDPFLIVHD
KFLNWLENHGLGNGPFDMGRFLYLQTRHSSIAFPEYASKWVNLRKCFINY
YKPSYNNIHKTSTPGLQAMLTSLGMEFEGSPHSGIDDAKNIARIVIRLLK
DQAYIRVNEKIVLLVESSTYENRSPVNTGGRLQTVMSVKNNEAEQWQENK
RKQIKCNV
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mRNA from alignment at LSalAtl2s1064:45136..46089+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000411-696258 ID=EMLSAT00000000411-696258|Name=EMLSAT00000000411|organism=Lepeophtheirus salmonis|type=mRNA|length=954bp|location=Sequence derived from alignment at LSalAtl2s1064:45136..46089+ (Lepeophtheirus salmonis)
ATGCCTCCAGAACAACAGAAAATATATCAAGAAATTAGCAAACTGAATGG
TCTTGTTGATCAAATGACCATTCAAAAAGTTAAAAATAGATGTAAAGATG
TTAAAATTGACCCTCGTGGTCATAATTATGTTGTGAAGCGGAGATTGAAA
GAATATTATAAAAGAGAAAAGCKGGAGGAAGCGGGTCTCGCCGTTAATCG
CAATGTTCACTATTTTGTTGTGATAGACTTTGAAGCAACATGTGAGGAGC
GTAATCCTAGTAATTATAAACACGAAATCATAGAGTTTCCTGCGGTTCTG
ATATCATCTCGCACCGCTGAAGTCGTGGATACCTTTCATGAATACATTCG
TCCTCTCATTAATCCTAATCTGAGTACCTTCTGCAAAAATCTCACTGGAA
TTTCGCAGAAAACGGTTAATGCAAGTGATCCTTTTTTAATAGTGCATGAT
AAATTTTTAAATTGGCTGGAGAATCATGGTTTAGGAAGTAAATATACATT
TAGTTTAGTAACAGATGGTCCTTTTGATATGGGAAGATTCCTCTATCTCC
AAACCCGTCACTCTTCCATTGCTTTTCCGGAATATGCGTCCAAATGGGTC
AACCTCAGAAAATGTTTTATTAATTATTACAAACCCAGTTATAACAATAT
TCATAAGACATCAACTCCAGGACTTCAAGCCATGCTCACCAGTTTAGGTA
TGGAATTTGAAGGTTCTCCCCATTCTGGTATCGATGATGCTAAAAACATT
GCCCGAATAGTCATCCGTCTTCTTAAAGATCAAGCTTACATACGTGTAAA
TGAAAAAATAGTATTGCTTGTGGAGTCAAGCACTTATGAGAATCGTTCTC
CTGTCAATACTGGGGGTCGACTTCAGACTGTCATGTCTGTTAAAAATAAT
GAGGCTGAACAATGGCAAGAAAATAAAAGAAAACAAATTAAATGCAATGT
CTAA
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