EMLSAT00000000434, EMLSAT00000000434-696281 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000434
Unique NameEMLSAT00000000434-696281
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1068supercontigLSalAtl2s1068:38540..40638 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000434 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000434EMLSAG00000000434-683200Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001923EMLSAE00000001923-710851Lepeophtheirus salmonisexon
EMLSAE00000001924EMLSAE00000001924-710852Lepeophtheirus salmonisexon
EMLSAE00000001925EMLSAE00000001925-710853Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770228auto770228Lepeophtheirus salmonispolypeptide
EMLSAP00000000434EMLSAP00000000434Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000434

>EMLSAP00000000434 ID=EMLSAP00000000434|Name=EMLSAP00000000434|organism=Lepeophtheirus salmonis|type=polypeptide|length=386bp
EXNXGGGGRXASPPPPLPRCDSPRPTTTTISTSRPVSVNHNIYANTPSKI
NTRLNQSLNANLNNSGLNSSKVSSNASPSTNGTKTSFMDSSREQSHHDLN
STQISPITSRSQRDTNSIHRQLNDNYSRRKHRHRRDNNLNATLKSRLNSS
QIAKFMLMSNESGVKEMITSLGLLCIISLLLALLSLVFLLEMSPAKSKNS
SQYGFDILSESSYVTVYEVTLALCALSLSLNLCCLLVCSIQFIFAIKLVK
GARGRASTNAYLRDAALTRTCAIAGFFISIPIFLTGVILYTYLRFDSTSA
IVTSILIGLVIVFCGAAIVHNVFIWQKEKSHSRQYSNDNNNPLAPGGPGP
GNEGKSFMGLPQATLDLSGPNGTIISAKGLELSTLV
back to top

mRNA from alignment at LSalAtl2s1068:38540..40638-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000434-696281 ID=EMLSAT00000000434-696281|Name=EMLSAT00000000434|organism=Lepeophtheirus salmonis|type=mRNA|length=2099bp|location=Sequence derived from alignment at LSalAtl2s1068:38540..40638- (Lepeophtheirus salmonis)
GAGTWAAATNCTGGAGGTGGGGGAAGASCAGCCTCTCCGCCTCCTCCACT GCCAAGATGCGACTCTCCAAGGCCTACTACTACCACCATCTCTACCTCAC GTCCTGTGAGTGTGAATCATAATATTTATGCTAACACACCCTCGAAAATA AATACTCGACTTAATCAGTCTCTAAATGCAAATCTGAATAACTCCGGTCT GAACTCATCCAAGGTATCCTCTAATGCAAGTCCTTCCACAAATGGAACGA AAACTTCCTTCATGGATTCCTCAAGGGAACAATCGCATCATGATCTCAAC TCTACTCAAATTTCTCCTATTACTTCCAGATCTCAGCGTGATACTAATTC AATTCATAGGTATGGACGTTATTTTATTCATTTTTCAATAGCAATGATTA TTCGTGGAGTTCTTTCATATGGAATCCGTTCCATATAATTTTGTGGTTTA TATGTAGCTTTTTTGCGAATGATTTTAAATGAATCTGCATCCCCTAGGAC GTACTTGTCCATAGCACGGTTTAATTTTAATCCATTTTACTAGTAATTGT AGTAATATCCGCTGCATGAAAATACTTGCAAACCTTTTCACTTCTGAGAG ATTTGTCTAAATACTCCCAGCCATGTATAATACTTACTTGTAGTATAATT AAATTTATAAAAAAAAGTTGTTGCATCTAAGTTTAAAAAATATAAATACA AAGTCAAAAGTATATAAACACACATACATGTCTGTCTATATGCCTTGTAC GTATATATTYCCTGCCGTTAATAAATTTTTAGTCCAGGTATTATTGCAAA TATAACAGGTTAGGTTGTCTTAATGATTAAATTTTTATAAGTGTAGTGAA GTAAAGTTTTTAACAATGGTATGAGCGTCTTATTGTACTCTTAATCGCAG ATTTTTTCCTCTTCAACTCGTGCTATTTACTCTGATAACTTCATATTACA TATGCACATGTATATCTCGTCTCTTCTTAAGTTTAGATGTCGAAGCATTG ACTGTGACCCTTGTTATGTATTCTTTTGTTCTTTGTATTCATCACTCAAA TATGTATTTTGATATGAATCGATCATAGAATAGGATCCAGTCATGTAGGA TTTTATATAAAAATAATTTTTATTTTTTTATAACTTACGAAGAGACACCT CCGCAAAAAATATACTTTTATATATATTCTTTTCACTGAAGTTGTATAAC GTTTTCATTATTTTTTATTCCTTTGCAGACAACTCAATGACAATTATTCT CGACGCAAACATCGGCATCGACGCGATAACAACCTTAATGCGACCCTCAA ATCCCGGTTAAATTCAAGTCAAATCGCAAAATTTATGTTGATGTCCAATG AGTCGGGCGTTAAAGAGATGATCACATCTCTGGGCCTACTATGTATCATA TCACTACTTCTTGCTCTTTTGTCATTAGTGTTTCTTCTTGAGATGTCTCC CGTATGTATCATTTATTCCATGTATTTGTAATTTATGTGGTGTTCAATGG ATTCATATTTTATTTTCTAGGCAAAATCCAAAAACTCATCCCAATATGGA TTTGATATATTATCGGAGAGCAGTTATGTAACCGTCTACGAGGTGACTCT CGCTTTATGTGCCCTATCATTGTCATTGAATCTCTGTTGTCTACTGGTAT GTTCCATTCAATTTATTTTCGCCATCAAGCTCGTTAAAGGAGCTCGTGGA CGAGCAAGTACAAATGCATATCTCCGTGATGCAGCGCTTACAAGGACTTG TGCAATCGCAGGTTTTTTCATATCCATTCCTATTTTCTTAACTGGAGTCA TTCTTTACACATATCTCCGCTTCGACTCTACTTCAGCCATTGTTACATCT ATCCTAATTGGACTTGTTATTGTTTTCTGTGGTGCGGCCATTGTCCATAA TGTTTTTATTTGGCAAAAGGAAAAGAGCCATTCCAGGCAATACTCCAACG ACAACAACAATCCCTTAGCACCTGGAGGACCTGGACCGGGTAATGAAGGA AAGAGTTTTATGGGACTCCCTCAAGCTACTTTGGATCTCAGTGGCCCCAA TGGTACAATTATCTCTGCCAAAGGATTGGAATTATCCACGCTTGTATAA
back to top
Add to Basket