EMLSAT00000000446, EMLSAT00000000446-696293 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000446
Unique NameEMLSAT00000000446-696293
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s106supercontigLSalAtl2s106:1159602..1161320 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000446 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000446EMLSAG00000000446-683212Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001978EMLSAE00000001978-710906Lepeophtheirus salmonisexon
EMLSAE00000001979EMLSAE00000001979-710907Lepeophtheirus salmonisexon
EMLSAE00000001980EMLSAE00000001980-710908Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780482auto780482Lepeophtheirus salmonispolypeptide
EMLSAP00000000446EMLSAP00000000446Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000446

>EMLSAP00000000446 ID=EMLSAP00000000446|Name=EMLSAP00000000446|organism=Lepeophtheirus salmonis|type=polypeptide|length=83bp
MGHLEFGNLTKIRGTTYYSLSPMEQRAFAGAFTNGLPNLFRRFKRNVVFI
APPFITSYLIWDWGEKSYEQFQRKKEDQYSHES
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mRNA from alignment at LSalAtl2s106:1159602..1161320+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000446-696293 ID=EMLSAT00000000446-696293|Name=EMLSAT00000000446|organism=Lepeophtheirus salmonis|type=mRNA|length=1719bp|location=Sequence derived from alignment at LSalAtl2s106:1159602..1161320+ (Lepeophtheirus salmonis)
GGACTGATAAAACTACAGTCTTTTTAGATCGATCCATAGTCACACATAGA
GAAAGAAATACAATGGTGTCATTCAAAATTATATTAAATAATAGTGTTGG
GGTCGAGTCAAAAATTTCGAGTTATGCGTCTATTTGAGTTCGTATATCAA
TTTTTTAGTTCGGTCAAATTTTAATTTTTAAGAATTTATATGTAATGAAC
AAAGGGATATATCTTTTTGAATACGTGAACTGTTCTTTTAATAAGAAAAG
AACGTCTTTAAAAGGGACTGTAGACCCCTCTCCAGTCAAATATTTTTTAT
CAGGCAAAAATTATCGCTTTTATGGGACAAATTTTAAATGGGAAAATAGG
GGATTTTATTTTCTAAAAAAATGTCTCTCAAAATAAAATCCTGCGTACTA
TAAGTAGTTTTTTCATACCTTTAAAGTAATAATAGAAATTTGACTAAACA
TTACTGGAATGTTTCGAGTCTTAATTATTCGAGCTCTAATAAAGTGATAT
TTTAGTAGAGTTTATTTTGAGTTTGAGTAAAACTGGAGTCAAAAACTTAT
AGTAAATAATAAATATTTCTATAGTTAGACAAGTTCCGTGACTTTCTTTA
AAAAAATAGCCAAGCAATTCTTTTTTAGCTATAAAGAATGCGAAGAATCA
GCTGGTTCATATAACTACTCTCACAGTTATTAATTTACATTCATATTGAC
ACTGTCGTTGAGAAGGAATCATCATGGGTCATTTAGAGTTCGGAAATTTA
ACCAAGATTAGGGGAACCACCTACTACTCCCTGTCTCCTATGGAACAGAG
AGCTTTTGCTGGAGCATTCACAAACGGACTCCCCAATTTATTTAGAAGAT
TTAAGCGTAATGTTGTTTTCATTGCTCCTCGTAAGTTAAAAATAATATCA
ATATTTTTGGAGATTTAACTCATTTTTCTCTATCTTTACAGCATTTATTA
CATCATACTTGATTTGGGATTGGGGTGAGAAGTCATACGAACAGTTCCAA
AGGAAGAAGGAGGATCAATACAGCCATGAATCATAAAGTTTCTTTCTGTT
GTTTTTATAACTTGATGATTGATTCATTTTTTTGTAGTGAATAAGTCTAA
ATAGATTTTTATTTATAGTTGTGGAAGAATTCGTGTAATTATTTCGTGTT
CTGTTCTTAATTATAGAAAAACAATCATTGATAGAGTTGAAATAATGGTA
ATACATATTATATGTATAACTATCAGATTAAAATAGTGTCATCGACTGAA
ATATTGCACATTCGAATAAATTAATTCGATATATCGCTGCCTTAGAATAA
AAATGTCCTATTTGGACATTTCAAAATCGTTTAGGAAAGACAATAGACAT
TTTTTGCTATACATAATTGATTTTATTATTGGTAAATAAAGGATTTGCTG
GATCATAAAACAAATTACATTGATAAAAGTTACGTTAATCAGAGTATTAA
AAAAAATATTTTTACCTATTGTTCAGGGTAAGGTGAAAACTAATAACGTA
GCTTGTAAACAAATTTTGTGAAATTTGACTAGAAGACATTTCTACAATTT
CTTTGTTAAATAGACAGTAGAGTTATCTAAACAACGTTTTCATGTTAAAA
GCAAAGAGTAATTGAGTGTATTCGATCATGCATCTTAATCGTAGTAGAAA
TTGGGCCTCTTGAAGGTATAAATATCTAAACTTTATAAGAATATCAACTC
TTGGCTTCTTTTTAATTAA
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