EMLSAT00000000459, EMLSAT00000000459-696306 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000459
Unique NameEMLSAT00000000459-696306
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s106supercontigLSalAtl2s106:531870..535626 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000459 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000459EMLSAG00000000459-683225Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002018EMLSAE00000002018-710946Lepeophtheirus salmonisexon
EMLSAE00000002019EMLSAE00000002019-710947Lepeophtheirus salmonisexon
EMLSAE00000002020EMLSAE00000002020-710948Lepeophtheirus salmonisexon
EMLSAE00000002021EMLSAE00000002021-710949Lepeophtheirus salmonisexon
EMLSAE00000002022EMLSAE00000002022-710950Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778422auto778422Lepeophtheirus salmonispolypeptide
EMLSAP00000000459EMLSAP00000000459Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000459

>EMLSAP00000000459 ID=EMLSAP00000000459|Name=EMLSAP00000000459|organism=Lepeophtheirus salmonis|type=polypeptide|length=616bp
MELLPGHHREFGQKDYWESFFKKRGSKAFEWYGEYTELCGVFHKYIKPTD
SILVVGCGNSELSGDLVRTGGFKSVFSIDTSSHAIKAMSDKYAQFSEDLK
FIEMDATEMKFPDEHFGVVVDKGTLDALFVDGEDPAVLSTITNMINEIDR
TLKNNGRYICISLLQPHILKWIVPTFAERGWPIRIIRCREVDSNKSPEEC
VFPVFAFIATKFKKISVPNKKLYSLLGVQQFAAIRARKRDAADVSLDLRV
PGSEAPRYSIFVVDRSQDKKGISSKKVKFAVFVVPEGRESEWLFVTEEGR
RQLAESAGCLRMIVVHLHREHTYSSIDAIQDELSSYALEFAPDDLPSNYQ
IPFMSWGDDNIGKRVERSRGKSKLSGEFVVEDVSLDDGLDYRRLIFXSSP
NLTQSEAKLIYKGNGKKKKQVIDHSFLACAHHSVMISSLDAYSKEKCTCL
IVGLGGGALASHVSNSFSKVDVVELDPAISRVAQDHFEFRENERLKVIND
DGIHYINGLSPSVYDVIMLDVDNKDRALGMSCPPKPFIEIDFMNNIKKSL
RDNGMLVLNLVCRDPLLREAAIKDLQSVFKKVRSYKIPEEVNEILYCQDN
CTTILVDDPKLLITLV
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mRNA from alignment at LSalAtl2s106:531870..535626+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000459-696306 ID=EMLSAT00000000459-696306|Name=EMLSAT00000000459|organism=Lepeophtheirus salmonis|type=mRNA|length=3757bp|location=Sequence derived from alignment at LSalAtl2s106:531870..535626+ (Lepeophtheirus salmonis)
TATAAATATTGAATATTATTAATATGGAATTGCTCCCTGGACATCACCGG GAATTCGGTCAAAAGGACTATTGGGAGTCTTTTTTCAAGAAGCGTGGATC AAAAGCATTTGAGTGGTACGGAGAGTACACAGAGTTATGCGGTGTCTTTC ACAAATATATCAAACCCACAGATTCTATTTTGGTTGTGGGTTGCGGTAAT TCGGAGCTCTCGGGGGATCTTGTTCGTACAGGTGGATTCAAATCCGTTTT CTCCATTGATACCTCGTCTCATGCCATCAAAGCAATGAGTGATAAATATG CTCAATTCAGTGAAGATCTCAAATTCATTGAAATGGATGCCACAGAAATG AAGTTCCCTGATGAGCATTTTGGGGTCGTCGTTGACAAAGGTACTCTGGA CGCTTTATTTGTCGATGGAGAAGACCCCGCTGTCCTCTCAACGATTACAA ACATGATCAATGTATAATTATTTCTAAAACCATAATACGTTTACTTATTC AGTTTTTTGCTCAGGAAATCGATCGAACGTTAAAGAACAATGGTCGCTAT ATCTGTATTTCCCTCTTACAACCTCATATTCTCAAATGGATTGTCCCTAC CTTTGCTGAACGAGGGTGGCCTATACGCATCATTCGATGTCGTGAAGTGG ACTCCAACAAATCTCCAGAAGAGTGTGTCTTCCCCGTCTTTGCCTTCATT GCGACCAAGTTCAAGAAAATTAGTGTCCCCAATAAAAAATTATATTCCCT TCTGTTTTGGAACTTGCATTATCTACGGACGGGAAACTAACGCGTCTGAA AGAGCCGAAAGAGCTCATAGATTCTGTTAGAGGGGTTCAACAATTTGCTG CAATAAGAGCTCGGAAACGAGATGCTGCAGATGTGTCCCTGGATCTCCGG GTTCCAGGATCTGAGGCTCCAAGATATTCTATATTTGTGGTTGACCGCTC ACAAGATAAAAAAGGAATATCCAGCAAGAAGGTTAAGTTTGCTGTTTTTG TCGTTCCTGAAGGGCGTGAATCAGAGTGGTTATTTGTTACGGAAGAGGGC CGAAGACAGTTGGCAGAATCTGCAGGATGTTTGCGAATGATTGTCGTGCA TCTTCATCGAGAGCACACTTATAGTTCTATAGATGCTATTCAGGATGAAC TCTCTAGCTACGCTTTAGAGTTTGCTCCTGATGATCTTCCTTCAAATTAT CAAATCCCATTTATGTCCTGGGGGGATGATAATATAGGGAAAAGAGTTGA ACGGAGTCGAGGAAAAAGCAAATTGTCCGGTGAGTTTGTTGTAGAGGATG TATCTCTGGATGATGGTCTCGACTATCGACGACTCATTTTTNTCTCGAGC CCCAATCTTACTCAATCGGAGGCAAAGTTGATTTATAAGGGAAACGGTAA GAAAAAGAAGCAAGTGATTGATCACTCATTTTTAGCTTGTGCCCACCATT CCGTGATGATCAGCTCGCTGGATGCCTACTCTAAAGAAAAATGTACCTGT TTAATCGTTGGACTCGGTGGAGGAGCTCTCGCTTCACACGTTTCCAATTC ATTTTCCAAGGTATATTATATGACTTAATTAACTATCAACATATTGTACC AATAACGAGTATGCCTCTATAGCTGAAGGTAGACGTAGTCGAGCTGGATC CTGCTATCAGTCGTGTAGCGCAGGATCACTTTGAGTTCAGAGAAAATGAG AGGCTAAAGGTGATAAACGATGATGGAATACATTACATCAATGGTCTGTC ACCCTCCGTTTATGATGTGATCATGTTGGACGTTGATAACAAGGACAGAG CTCTGGGAATGAGCTGCCCACCAAAACCCTTCATCGAGATAGACTTTATG AATAATATTAAAAAAAGCCTGCGAGACAACGGTAAGTAACACATTTTTTT CTTTATTATAAGTTTGAGAAATCACAAATCATAATAAAACATATTTATTA CATCAAATAAATGCATCGTGCATCCTACGCAGCTATGCATATAAAAAATA ATTTTTGGCGATGATATTTATTTTCTCTTAAGAGTGTACGATGTGCAATT CGGTTTCATAACATTAATATAATGAAGACAATAAATTTGTTATTACTCTT TTACACTTAATAGAGTACGAATAAGAGGAAGGGGTACGGGAGAGGACAAA AGAAATTCATAAAATATATTTCTTTAAAACGAATGCTAAGACAACACACG GCATACTATCTTTTCTTTTTCATCTATCTGTAACTCTCTGTGAAATCTAA AACACAATGCTCATAATTAATTTATTGTATAATGCTAATATATAATCAAC ATGCCCTCATGAAATAACTCATTTAATTGATGCATTCTAGGAATGTTGGT CCTGAATCTGGTCTGTCGAGATCCTTTACTTCGAGAAGCTGCAATAAAAG ACTTGCAATCAGTTTTTAAGAAAGTTCGATCCTACAAAATCCCTGAAGAA GTAAACGAAATTCTCTATTGCCAAGATAATTGCACAACGATTCTTGTAGA TGATCCAAAATTGTTGATAACTCTAGTATGAATAATGATAGTAATGTCTG GATTTGATTTTTTTTTTTGCTCCTTAATCTCCTGTTGCTGTTGGTGTATT GTTTTGACTAGTCTTAATTTGAAATAAACTCAAATTCACTAACTGAGAAT AGCATTGGTATTATGAGNCTTTTTAACATGTTGATTCATAGAGCTTCGAT TCGTAAAGATCCTTTCACAAATGGAGCATGGGAATTTTTTACCGTAGTGG AGACTCTCTCGATGAGCTTTTAGATTGGACTTTCTCCCAAAAGACTTGCC GCATTCAGGACAAACGTGTACTTCAGTCACACCAGAGTGTTTTTCCTTTC GGTGCCCAAAGAGAGACCTTTTGCTCTTGAATATCTTTGCACAGTCCACA CATGTAAGTTCTTTGAGAGAGCTGTGATGCAGGGAATTGTGTTCTGTGAT ATCATTGATGGGAACAAACTGATGACACACACGACACACGTTGAACTCTC CTCCATTGGACTCCTTGACCTTGACTGGTGAATTGGGGTTTCCATCACTC ACCTCAACCTCCACAAACTCTGTGTTGTCATCGTCCAAAACGACTTCTTC ATAGKCCTGCCAAGAGAAATGATGCATGAAATTATCTTAAATAAAACAAG AGACAAAGAGTGAGCCTCGCGCGCAAACCTGAAGAACTTCTCCCGAGCCT CCGCGTGAGAGCTGTTCCAGAGCAGAGACGGTTTCGTAGACAGCTACATC CTGAACTACTTCCTCCTCTTCTTCCGTCGTCTCAATTATGTAAATTTGCT GTCCATCGTCCTGGACGKCCTCTTCTGTCGTCACAACCACGGAGCCTCCG TCATCAGGATTATCCTCCCCATCATCGATAGAGACTCCACCTGACGTTGA CACAATTTTAATTGTTGTTGTTCCGCTGTCGCCGCCGCCACTCATTTCAG CTGAATTCAGCTATTTCATAGAAGGGGAAATTAGGAGATTCGTCAATTTC TTCCTCTTCTCTCTCTTCTTCCTTCTCTCTGTCTTTCTTTTGTCTCTCCG CTGCCTTCTCCCTCTCTCTGATTTTCAGCTCCCTCTCTCTTTCCCTCTCT TTCTCTCTCTCTCTCTATGTCTCCCCAACTCCCTCCTCAATCCACATCAC CGATCCTATTAGCCACCTTCTCAATCTCCCTCCTTTTTTATTAAGAACAA CTACAAAAACTCACAACAGCGTCACTTGACAACAGCGTCCTCTTTTTATT AACTCAA
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